RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 SFRP5Q5T4F7 317 aa22.43■■□□□ 1.18
CPNE1-216ENST00000437340 CHMP1BQ7LBR1 199 aa22.43■■□□□ 1.18
CPNE1-216ENST00000437340 RNF144BQ7Z419 303 aa22.43■■□□□ 1.18
CPNE1-216ENST00000437340 PIAS4Q8N2W9 510 aaPredicted RBP22.43■■□□□ 1.18
CPNE1-216ENST00000437340 SEMA6DQ8NFY4 1073 aa22.43■■□□□ 1.18
CPNE1-216ENST00000437340 AKR7LQ8NHP1 331 aa22.43■■□□□ 1.18
CPNE1-216ENST00000437340 LPAR5Q9H1C0 372 aa22.43■■□□□ 1.18
CPNE1-216ENST00000437340 ZDHHC11Q9H8X9 412 aa22.43■■□□□ 1.18
CPNE1-216ENST00000437340 ZFHX4Q86UP3 3567 aa22.43■■□□□ 1.18
CPNE1-216ENST00000437340 WIPF3A6NGB9 483 aa22.43■■□□□ 1.18
CPNE1-216ENST00000437340 ZNF587BE7ETH6 402 aa22.43■■□□□ 1.18
CPNE1-216ENST00000437340 SSNA1O43805 119 aa22.43■■□□□ 1.18
CPNE1-216ENST00000437340 HPXP02790 462 aa22.43■■□□□ 1.18
CPNE1-216ENST00000437340 CD74P04233 296 aa22.43■■□□□ 1.18
CPNE1-216ENST00000437340 TNFSF10P50591 281 aa22.43■■□□□ 1.18
CPNE1-216ENST00000437340 IFITM2Q01629 132 aa22.43■■□□□ 1.18
CPNE1-216ENST00000437340 CDK10Q15131 360 aa22.43■■□□□ 1.18
CPNE1-216ENST00000437340 UBE2V2Q15819 145 aa22.43■■□□□ 1.18
CPNE1-216ENST00000437340 CDNFQ49AH0 187 aa22.43■■□□□ 1.18
CPNE1-216ENST00000437340 BEST4Q8NFU0 473 aa22.43■■□□□ 1.18
CPNE1-216ENST00000437340 OR4D10Q8NGI6 311 aa22.43■■□□□ 1.18
CPNE1-216ENST00000437340 REEP6Q96HR9 211 aa22.43■■□□□ 1.18
CPNE1-216ENST00000437340 SCNM1Q9BWG6 230 aa22.43■■□□□ 1.18
CPNE1-216ENST00000437340 CALHM2Q9HA72 323 aa22.43■■□□□ 1.18
CPNE1-216ENST00000437340 RGS13O14921 159 aa22.42■■□□□ 1.18
CPNE1-216ENST00000437340 CDC14BO60729 498 aa22.42■■□□□ 1.18
CPNE1-216ENST00000437340 LCATP04180 440 aa22.42■■□□□ 1.18
CPNE1-216ENST00000437340 PATE4P0C8F1 98 aa22.42■■□□□ 1.18
CPNE1-216ENST00000437340 NAT2P11245 290 aa22.42■■□□□ 1.18
CPNE1-216ENST00000437340 CPN1P15169 458 aa22.42■■□□□ 1.18
CPNE1-216ENST00000437340 TNK1Q13470 666 aa22.42■■□□□ 1.18
CPNE1-216ENST00000437340 CHST4Q8NCG5 386 aa22.42■■□□□ 1.18
CPNE1-216ENST00000437340 FGFBP3Q8TAT2 258 aa22.42■■□□□ 1.18
CPNE1-216ENST00000437340 GINS4Q9BRT9 223 aa22.42■■□□□ 1.18
CPNE1-216ENST00000437340 ZMAT3Q9HA38 289 aaKnown RBP22.42■■□□□ 1.18
CPNE1-216ENST00000437340 GPN1Q9HCN4 374 aaPredicted RBP22.42■■□□□ 1.18
CPNE1-216ENST00000437340 NPDC1Q9NQX5 325 aaPredicted RBP22.42■■□□□ 1.18
CPNE1-216ENST00000437340 WASF3Q9UPY6 502 aa22.42■■□□□ 1.18
CPNE1-216ENST00000437340 SNRPGP15A8MWD9 76 aa22.41■■□□□ 1.18
CPNE1-216ENST00000437340 RAB3DO95716 219 aa22.41■■□□□ 1.18
CPNE1-216ENST00000437340 HGFACQ04756 655 aa22.41■■□□□ 1.18
CPNE1-216ENST00000437340 RIPPLY1Q0D2K3 151 aa22.41■■□□□ 1.18
CPNE1-216ENST00000437340 MCEMP1Q8IX19 187 aa22.41■■□□□ 1.18
CPNE1-216ENST00000437340 OR51S1Q8NGJ8 323 aa22.41■■□□□ 1.18
CPNE1-216ENST00000437340 OR8S1Q8NH09 359 aa22.41■■□□□ 1.18
CPNE1-216ENST00000437340 TMEM59Q9BXS4 323 aa22.41■■□□□ 1.18
CPNE1-216ENST00000437340 CST11Q9H112 138 aa22.41■■□□□ 1.18
CPNE1-216ENST00000437340 LDAHQ9H6V9 325 aa22.41■■□□□ 1.18
CPNE1-216ENST00000437340 BEX1Q9HBH7 125 aa22.41■■□□□ 1.18
CPNE1-216ENST00000437340 ZNF222Q9UK12 451 aa22.41■■□□□ 1.18
CPNE1-216ENST00000437340 LIPGQ9Y5X9 500 aa22.41■■□□□ 1.18
CPNE1-216ENST00000437340 MEIKINA0A087WXM9 373 aa22.4■■□□□ 1.18
CPNE1-216ENST00000437340 TRGV5A0A0B4J1U4 118 aa22.4■■□□□ 1.18
CPNE1-216ENST00000437340 IGHV3-9P01782 118 aa22.4■■□□□ 1.18
CPNE1-216ENST00000437340 PTGFRP43088 359 aa22.4■■□□□ 1.18
CPNE1-216ENST00000437340 RAD52P43351 418 aa22.4■■□□□ 1.18
CPNE1-216ENST00000437340 ARF1P84077 181 aaKnown RBP22.4■■□□□ 1.18
CPNE1-216ENST00000437340 CRIP3Q6Q6R5 217 aa22.4■■□□□ 1.18
CPNE1-216ENST00000437340 IGFL2Q6UWQ7 119 aa22.4■■□□□ 1.18
CPNE1-216ENST00000437340 ZNF584Q8IVC4 421 aa22.4■■□□□ 1.18
CPNE1-216ENST00000437340 ZFAND1Q8TCF1 268 aa22.4■■□□□ 1.18
CPNE1-216ENST00000437340 APH1AQ96BI3 265 aa22.4■■□□□ 1.18
CPNE1-216ENST00000437340 HYLS1Q96M11 299 aa22.4■■□□□ 1.18
CPNE1-216ENST00000437340 URM1Q9BTM9 101 aaKnown RBP22.4■■□□□ 1.18
CPNE1-216ENST00000437340 ZNF736B4DX44 427 aaPredicted RBP22.4■■□□□ 1.18
CPNE1-216ENST00000437340 MPIG6BO95866 241 aa22.4■■□□□ 1.18
CPNE1-216ENST00000437340 ZNF24P17028 368 aa22.4■■□□□ 1.18
CPNE1-216ENST00000437340 NCCRP1Q6ZVX7 275 aaPredicted RBP22.4■■□□□ 1.18
CPNE1-216ENST00000437340 FJX1Q86VR8 437 aa22.4■■□□□ 1.18
CPNE1-216ENST00000437340 TMEM104Q8NE00 496 aa22.4■■□□□ 1.18
CPNE1-216ENST00000437340 DVL3Q92997 716 aaPredicted RBP22.4■■□□□ 1.18
CPNE1-216ENST00000437340 SPSB1Q96BD6 273 aa22.4■■□□□ 1.18
CPNE1-216ENST00000437340 CMBLQ96DG6 245 aa22.4■■□□□ 1.18
CPNE1-216ENST00000437340 WDYHV1Q96HA8 205 aa22.4■■□□□ 1.18
CPNE1-216ENST00000437340 DEFB127Q9H1M4 99 aa22.4■■□□□ 1.18
CPNE1-216ENST00000437340 PTTG3PQ9NZH4 202 aa22.4■■□□□ 1.18
CPNE1-216ENST00000437340 ITGB1BP2Q9UKP3 347 aa22.4■■□□□ 1.18
CPNE1-216ENST00000437340 ELF5Q9UKW6 265 aaPredicted RBP22.4■■□□□ 1.18
CPNE1-216ENST00000437340 ING4Q9UNL4 249 aa22.4■■□□□ 1.18
CPNE1-216ENST00000437340 PYCARD-AS1I3L0S3 204 aa22.39■■□□□ 1.17
CPNE1-216ENST00000437340 ATP6V1G1O75348 118 aa22.39■■□□□ 1.17
CPNE1-216ENST00000437340 GSTP1P09211 210 aaKnown RBP22.39■■□□□ 1.17
CPNE1-216ENST00000437340 CXCL3P19876 107 aa22.39■■□□□ 1.17
CPNE1-216ENST00000437340 MEF2DQ14814 521 aa22.39■■□□□ 1.17
CPNE1-216ENST00000437340 SEZ6L2Q6UXD5 910 aa22.39■■□□□ 1.17
CPNE1-216ENST00000437340 ZNF100Q8IYN0 542 aa22.39■■□□□ 1.17
CPNE1-216ENST00000437340 CPNE2Q96FN4 548 aaPredicted RBP22.39■■□□□ 1.17
CPNE1-216ENST00000437340 SELENOIQ9C0D9 397 aa22.39■■□□□ 1.17
CPNE1-216ENST00000437340 RANBP3Q9H6Z4 567 aaPredicted RBP22.39■■□□□ 1.17
CPNE1-216ENST00000437340 GP6Q9HCN6 339 aa22.39■■□□□ 1.17
CPNE1-216ENST00000437340 UPB1Q9UBR1 384 aa22.39■■□□□ 1.17
CPNE1-216ENST00000437340 NPTNQ9Y639 398 aa22.39■■□□□ 1.17
CPNE1-216ENST00000437340 CREBL2O60519 120 aaPredicted RBP22.38■■□□□ 1.17
CPNE1-216ENST00000437340 ANXA7P20073 488 aaKnown RBP22.38■■□□□ 1.17
CPNE1-216ENST00000437340 CCL11P51671 97 aa22.38■■□□□ 1.17
CPNE1-216ENST00000437340 PABPC1L2AQ5JQF8 200 aa22.38■■□□□ 1.17
CPNE1-216ENST00000437340 RNFT1Q5M7Z0 435 aa22.38■■□□□ 1.17
CPNE1-216ENST00000437340 ZNF626Q68DY1 528 aa22.38■■□□□ 1.17
CPNE1-216ENST00000437340 PLXDC2Q6UX71 529 aa22.38■■□□□ 1.17
CPNE1-216ENST00000437340 TRAPPC6BQ86SZ2 158 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms