RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 ZNF93P35789 620 aaPredicted RBP18.36■□□□□ 0.53
PTPRF-207ENST00000436724 TAS2R20P59543 309 aa18.36■□□□□ 0.53
PTPRF-207ENST00000436724 RAB1AP62820 205 aa18.36■□□□□ 0.53
PTPRF-207ENST00000436724 ACSF3Q4G176 576 aaPredicted RBP18.36■□□□□ 0.53
PTPRF-207ENST00000436724 SMIM4Q8WVI0 70 aa18.36■□□□□ 0.53
PTPRF-207ENST00000436724 FOXRED1Q96CU9 486 aaPredicted RBP18.36■□□□□ 0.53
PTPRF-207ENST00000436724 CTDSPLO15194 276 aa18.35■□□□□ 0.53
PTPRF-207ENST00000436724 TFAP2EQ6VUC0 442 aa18.35■□□□□ 0.53
PTPRF-207ENST00000436724 OR1K1Q8NGR3 316 aa18.35■□□□□ 0.53
PTPRF-207ENST00000436724 CACNG6Q9BXT2 260 aa18.35■□□□□ 0.53
PTPRF-207ENST00000436724 ATG5Q9H1Y0 275 aa18.35■□□□□ 0.53
PTPRF-207ENST00000436724 MED28Q9H204 178 aa18.35■□□□□ 0.53
PTPRF-207ENST00000436724 DKK4Q9UBT3 224 aa18.35■□□□□ 0.53
PTPRF-207ENST00000436724 K7ENP7 123 aa18.35■□□□□ 0.53
PTPRF-207ENST00000436724 HCKP08631 526 aa18.35■□□□□ 0.53
PTPRF-207ENST00000436724 CCR6P51684 374 aa18.35■□□□□ 0.53
PTPRF-207ENST00000436724 SNRPD2P62316 118 aaKnown RBP18.35■□□□□ 0.53
PTPRF-207ENST00000436724 FOXF2Q12947 444 aa18.35■□□□□ 0.53
PTPRF-207ENST00000436724 KLF9Q13886 244 aaPredicted RBP18.35■□□□□ 0.53
PTPRF-207ENST00000436724 GUSBP1Q15486 140 aa18.35■□□□□ 0.53
PTPRF-207ENST00000436724 UBE2V2Q15819 145 aa18.35■□□□□ 0.53
PTPRF-207ENST00000436724 INO80CQ6PI98 192 aaPredicted RBP18.35■□□□□ 0.53
PTPRF-207ENST00000436724 OR52I2Q8NH67 350 aa18.35■□□□□ 0.53
PTPRF-207ENST00000436724 GRPEL2Q8TAA5 225 aa18.35■□□□□ 0.53
PTPRF-207ENST00000436724 GLRX2Q9NS18 164 aa18.35■□□□□ 0.53
PTPRF-207ENST00000436724 C5orf49A4QMS7 147 aa18.34■□□□□ 0.53
PTPRF-207ENST00000436724 LDLRAD4O15165 306 aa18.34■□□□□ 0.53
PTPRF-207ENST00000436724 ZZEF1O43149 2961 aa18.34■□□□□ 0.53
PTPRF-207ENST00000436724 MTRF1O75570 445 aaKnown RBP18.34■□□□□ 0.53
PTPRF-207ENST00000436724 EDN3P14138 238 aa18.34■□□□□ 0.53
PTPRF-207ENST00000436724 VWA1Q6PCB0 445 aa18.34■□□□□ 0.53
PTPRF-207ENST00000436724 Q6ZSR3 168 aa18.34■□□□□ 0.53
PTPRF-207ENST00000436724 ZNF584Q8IVC4 421 aa18.34■□□□□ 0.53
PTPRF-207ENST00000436724 OR11H7Q8NGC8 314 aa18.34■□□□□ 0.53
PTPRF-207ENST00000436724 FAM46BQ96A09 425 aa18.34■□□□□ 0.53
PTPRF-207ENST00000436724 MS4A3Q96HJ5 214 aa18.34■□□□□ 0.53
PTPRF-207ENST00000436724 KLK11Q9UBX7 282 aa18.34■□□□□ 0.53
PTPRF-207ENST00000436724 CIB4A0PJX0 185 aa18.34■□□□□ 0.53
PTPRF-207ENST00000436724 GGT3PA6NGU5 568 aa18.34■□□□□ 0.53
PTPRF-207ENST00000436724 FABP7O15540 132 aa18.34■□□□□ 0.53
PTPRF-207ENST00000436724 XRCC3O43542 346 aa18.34■□□□□ 0.53
PTPRF-207ENST00000436724 KIR2DL2P43627 348 aaPredicted RBP18.34■□□□□ 0.53
PTPRF-207ENST00000436724 ZNF92Q03936 586 aa18.34■□□□□ 0.53
PTPRF-207ENST00000436724 TBR1Q16650 682 aa18.34■□□□□ 0.53
PTPRF-207ENST00000436724 ANGPTL5Q86XS5 388 aa18.34■□□□□ 0.53
PTPRF-207ENST00000436724 BCL2L2Q92843 193 aaPredicted RBP18.34■□□□□ 0.53
PTPRF-207ENST00000436724 ZNF71Q9NQZ8 489 aaPredicted RBP18.34■□□□□ 0.53
PTPRF-207ENST00000436724 MRPL15Q9P015 296 aaKnown RBP18.34■□□□□ 0.53
PTPRF-207ENST00000436724 MT-ND4P03905 459 aa18.33■□□□□ 0.52
PTPRF-207ENST00000436724 ERCC1P07992 297 aaPredicted RBP18.33■□□□□ 0.52
PTPRF-207ENST00000436724 STOMP27105 288 aa18.33■□□□□ 0.52
PTPRF-207ENST00000436724 OR3A4PP47883 348 aa18.33■□□□□ 0.52
PTPRF-207ENST00000436724 WNT2BQ93097 391 aa18.33■□□□□ 0.52
PTPRF-207ENST00000436724 HYLS1Q96M11 299 aa18.33■□□□□ 0.52
PTPRF-207ENST00000436724 UQCC2Q9BRT2 126 aa18.33■□□□□ 0.52
PTPRF-207ENST00000436724 CHST5Q9GZS9 411 aa18.33■□□□□ 0.52
PTPRF-207ENST00000436724 OR51J1Q9H342 316 aa18.33■□□□□ 0.52
PTPRF-207ENST00000436724 OR14I1A6ND48 311 aa18.32■□□□□ 0.52
PTPRF-207ENST00000436724 AHRRA9YTQ3 701 aa18.32■□□□□ 0.52
PTPRF-207ENST00000436724 ALX3O95076 343 aa18.32■□□□□ 0.52
PTPRF-207ENST00000436724 IGHV1-2P23083 117 aa18.32■□□□□ 0.52
PTPRF-207ENST00000436724 THBS4P35443 961 aa18.32■□□□□ 0.52
PTPRF-207ENST00000436724 GDNFP39905 211 aa18.32■□□□□ 0.52
PTPRF-207ENST00000436724 SNTB2Q13425 540 aaKnown RBP18.32■□□□□ 0.52
PTPRF-207ENST00000436724 UNC119Q13432 240 aa18.32■□□□□ 0.52
PTPRF-207ENST00000436724 DYRK1AQ13627 763 aa18.32■□□□□ 0.52
PTPRF-207ENST00000436724 AWAT2Q6E213 333 aa18.32■□□□□ 0.52
PTPRF-207ENST00000436724 PAQR4Q8N4S7 273 aaPredicted RBP18.32■□□□□ 0.52
PTPRF-207ENST00000436724 SEMA6DQ8NFY4 1073 aa18.32■□□□□ 0.52
PTPRF-207ENST00000436724 OR5D18Q8NGL1 313 aa18.32■□□□□ 0.52
PTPRF-207ENST00000436724 C7orf50Q9BRJ6 194 aaKnown RBP18.32■□□□□ 0.52
PTPRF-207ENST00000436724 RP1L1Q8IWN7 2480 aaPredicted RBP18.32■□□□□ 0.52
PTPRF-207ENST00000436724 INTS1Q8N201 2190 aaKnown RBP18.32■□□□□ 0.52
PTPRF-207ENST00000436724 TRAV18A0A075B6X5 111 aa18.32■□□□□ 0.52
PTPRF-207ENST00000436724 A0A1W2PR80 420 aa18.32■□□□□ 0.52
PTPRF-207ENST00000436724 LYZL6O75951 148 aa18.32■□□□□ 0.52
PTPRF-207ENST00000436724 TSC22D1Q15714 1073 aa18.32■□□□□ 0.52
PTPRF-207ENST00000436724 MOGAT2Q3SYC2 334 aa18.32■□□□□ 0.52
PTPRF-207ENST00000436724 CRIP3Q6Q6R5 217 aa18.32■□□□□ 0.52
PTPRF-207ENST00000436724 GPR137Q96N19 417 aa18.32■□□□□ 0.52
PTPRF-207ENST00000436724 C1QTNF5Q9BXJ0 243 aa18.32■□□□□ 0.52
PTPRF-207ENST00000436724 DIABLOQ9NR28 239 aa18.32■□□□□ 0.52
PTPRF-207ENST00000436724 COPZ2Q9P299 210 aa18.32■□□□□ 0.52
PTPRF-207ENST00000436724 HSPB11Q9Y547 144 aa18.32■□□□□ 0.52
PTPRF-207ENST00000436724 GABARAPH6UMI1 98 aa18.31■□□□□ 0.52
PTPRF-207ENST00000436724 RRP8O43159 456 aaKnown RBP18.31■□□□□ 0.52
PTPRF-207ENST00000436724 RAD51DO75771 328 aa18.31■□□□□ 0.52
PTPRF-207ENST00000436724 VSIG8P0DPA2 414 aa18.31■□□□□ 0.52
PTPRF-207ENST00000436724 GABRA1P14867 456 aa18.31■□□□□ 0.52
PTPRF-207ENST00000436724 ARR3P36575 388 aa18.31■□□□□ 0.52
PTPRF-207ENST00000436724 PMPCAQ10713 525 aa18.31■□□□□ 0.52
PTPRF-207ENST00000436724 GSG1Q2KHT4 349 aa18.31■□□□□ 0.52
PTPRF-207ENST00000436724 RPUSD3Q6P087 351 aaKnown RBP18.31■□□□□ 0.52
PTPRF-207ENST00000436724 SEM1Q6ZVN7 128 aa18.31■□□□□ 0.52
PTPRF-207ENST00000436724 BTN2A1Q7KYR7 527 aa18.31■□□□□ 0.52
PTPRF-207ENST00000436724 C9orf62Q8N4C0 152 aa18.31■□□□□ 0.52
PTPRF-207ENST00000436724 SSC4DQ8WTU2 575 aa18.31■□□□□ 0.52
PTPRF-207ENST00000436724 PP6455Q8WZ26 134 aa18.31■□□□□ 0.52
PTPRF-207ENST00000436724 PIGTQ969N2 578 aa18.31■□□□□ 0.52
PTPRF-207ENST00000436724 PHF21AQ96BD5 680 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms