RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 H3BQ15 152 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 SYNGR4O95473 234 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 CD200P41217 278 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 FOXO1Q12778 655 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 SMAD4Q13485 552 aaKnown RBP6.66□□□□□ -1.34
CPSF6-202ENST00000435070 FAM53BQ14153 422 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 GPR18Q14330 331 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 TMEM41BQ5BJD5 291 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 TMEM182Q6ZP80 229 aaPredicted RBP6.66□□□□□ -1.34
CPSF6-202ENST00000435070 ZNF595Q8IYB9 648 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 ZDHHC22Q8N966 263 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 ZCCHC14Q8WYQ9 949 aaKnown RBP6.66□□□□□ -1.34
CPSF6-202ENST00000435070 ZNF775Q96BV0 537 aaPredicted RBP6.66□□□□□ -1.34
CPSF6-202ENST00000435070 WFIKKN1Q96NZ8 548 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 HIST1H2BLQ99880 126 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 NDUFAF3Q9BU61 184 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 METTL9Q9H1A3 318 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 TRPM6Q9BX84 2022 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 WIPF3A6NGB9 483 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 CDRT15L2A8MXV6 281 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 RAB27BO00194 218 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 ADAMTS4O75173 837 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 GABRA4P48169 554 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 FAM110CQ1W6H9 321 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 CARD17Q5XLA6 110 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 DPY19L2P2Q6ZN68 376 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 THNSL2Q86YJ6 484 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 TXN2Q99757 166 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 SNHG12Q9BXW3 62 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 GOLT1BQ9Y3E0 138 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 FLVCR1Q9Y5Y0 555 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 BRWD3Q6RI45 1802 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 ADAM10O14672 748 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 CCL20P78556 96 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 TMEM128Q5BJH2 165 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 PTCRAQ6ISU1 281 aaPredicted RBP6.66□□□□□ -1.34
CPSF6-202ENST00000435070 TIPARPQ7Z3E1 657 aaKnown RBP6.66□□□□□ -1.34
CPSF6-202ENST00000435070 C5orf24Q7Z6I8 188 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 ZNF101Q8IZC7 436 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 C5orf66Q9H5L9 145 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 LUZP4Q9P127 313 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 PTBP3O95758 552 aaKnown RBP6.66□□□□□ -1.34
CPSF6-202ENST00000435070 PGA3P0DJD8 388 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 ALOX5APP20292 161 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 OR3A2P47893 321 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 SRSF5Q13243 272 aaKnown RBP6.66□□□□□ -1.34
CPSF6-202ENST00000435070 ELOBQ15370 118 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 TMEM35AQ53FP2 167 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 CPT1CQ8TCG5 803 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 C2orf50Q96LR7 162 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 SLCO5A1Q9H2Y9 848 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 RIMS4Q9H426 269 aaPredicted RBP6.66□□□□□ -1.34
CPSF6-202ENST00000435070 PRODH2Q9UF12 536 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 CYP8B1Q9UNU6 501 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 C5orf42Q9H799 3197 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 BCAT2O15382 392 aaPredicted RBP6.66□□□□□ -1.34
CPSF6-202ENST00000435070 DUSP11O75319 330 aaKnown RBP6.66□□□□□ -1.34
CPSF6-202ENST00000435070 DIRAS3O95661 229 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 SCGB1D1O95968 90 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 FGF7P21781 194 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 RPL29P47914 159 aaKnown RBP6.66□□□□□ -1.34
CPSF6-202ENST00000435070 RAB1AP62820 205 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 SSBP1Q04837 148 aaKnown RBP6.66□□□□□ -1.34
CPSF6-202ENST00000435070 MFGE8Q08431 387 aaPredicted RBP6.66□□□□□ -1.34
CPSF6-202ENST00000435070 LRRC18Q8N456 261 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 ZNF439Q8NDP4 499 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 MOGAT1Q96PD6 335 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 ABHD14AQ9BUJ0 271 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 ST6GALNAC5Q9BVH7 336 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 EML5Q05BV3 1969 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 ZNF708P17019 499 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 DLK1P80370 383 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 SPEM2Q0P670 501 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 NCR3LG1Q68D85 454 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 C1QL4Q86Z23 238 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 MRPL41Q8IXM3 137 aaKnown RBP6.66□□□□□ -1.34
CPSF6-202ENST00000435070 RCBTB1Q8NDN9 531 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 SMARCD2Q92925 531 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 ADIPOR1Q96A54 375 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 TMEM230Q96A57 120 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 SLC26A1Q9H2B4 701 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 INSL5Q9Y5Q6 135 aa6.66□□□□□ -1.34
CPSF6-202ENST00000435070 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.65□□□□□ -1.34
CPSF6-202ENST00000435070 MARCH11A6NNE9 402 aa6.65□□□□□ -1.34
CPSF6-202ENST00000435070 TNFSF12O43508 249 aa6.65□□□□□ -1.34
CPSF6-202ENST00000435070 JTBO76095 146 aa6.65□□□□□ -1.34
CPSF6-202ENST00000435070 NSA2O95478 260 aaKnown RBP6.65□□□□□ -1.34
CPSF6-202ENST00000435070 AGR2O95994 175 aa6.65□□□□□ -1.34
CPSF6-202ENST00000435070 AK1P00568 194 aa6.65□□□□□ -1.34
CPSF6-202ENST00000435070 TIMP1P01033 207 aa6.65□□□□□ -1.34
CPSF6-202ENST00000435070 ZNF658BQ4V348 819 aaPredicted RBP6.65□□□□□ -1.34
CPSF6-202ENST00000435070 TMEM268Q5VZI3 342 aa6.65□□□□□ -1.34
CPSF6-202ENST00000435070 PLXDC2Q6UX71 529 aa6.65□□□□□ -1.34
CPSF6-202ENST00000435070 OR10J5Q8NHC4 309 aa6.65□□□□□ -1.34
CPSF6-202ENST00000435070 PBDC1Q9BVG4 233 aa6.65□□□□□ -1.34
CPSF6-202ENST00000435070 FAM221BA6H8Z2 402 aa6.65□□□□□ -1.34
CPSF6-202ENST00000435070 IFNL4K9M1U5 179 aa6.65□□□□□ -1.34
CPSF6-202ENST00000435070 GRB2P62993 217 aaKnown RBP6.65□□□□□ -1.34
CPSF6-202ENST00000435070 ARFRP1Q13795 201 aa6.65□□□□□ -1.34
CPSF6-202ENST00000435070 SLC10A1Q14973 349 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms