RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 CCDC28AQ8IWP9 274 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 PAQR4Q8N4S7 273 aaPredicted RBP6.55□□□□□ -1.36
COL17A1-204ENST00000433822 ARRDC1Q8N5I2 433 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 C12orf45Q8N5I9 185 aaPredicted RBP6.55□□□□□ -1.36
COL17A1-204ENST00000433822 JAGN1Q8N5M9 183 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 GJC3Q8NFK1 279 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 OR4D6Q8NGJ1 314 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 OR51A2Q8NGJ7 313 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 OR1J2Q8NGS2 313 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 KCNG3Q8TAE7 436 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 IFI44Q8TCB0 444 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 PP6455Q8WZ26 134 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 CPNE2Q96FN4 548 aaPredicted RBP6.55□□□□□ -1.36
COL17A1-204ENST00000433822 CITED4Q96RK1 184 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 SMAD5Q99717 465 aaKnown RBP6.55□□□□□ -1.36
COL17A1-204ENST00000433822 ZPBPQ9BS86 351 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 NELFAQ9H3P2 528 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 EXO5Q9H790 373 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 CNTD2Q9H8S5 307 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 CA10Q9NS85 328 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 CENPMQ9NSP4 180 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 GLTPQ9NZD2 209 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 SHPKQ9UHJ6 478 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 FBXL2Q9UKC9 423 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 V9GYS6 101 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 APC2O95996 2303 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 A0A0D9SG52 128 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 A0A1B0GW55 424 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 SULT2B1O00204 365 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 P2RY10O00398 339 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 RP2O75695 350 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 CBR3O75828 277 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 KLF7O75840 302 aaPredicted RBP6.54□□□□□ -1.36
COL17A1-204ENST00000433822 OR2F2O95006 317 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 AMY2AP04746 511 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 RLN1P04808 185 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 UMODP07911 640 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 DUX4L2P0CJ85 424 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 DUX4L3P0CJ86 424 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 DUX4L4P0CJ87 422 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 DUX4L5P0CJ88 424 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 DUX4L6P0CJ89 424 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 DUX4L7P0CJ90 424 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 MED14OSP0DP75 135 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 PTHLHP12272 177 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 ZNF20P17024 532 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 MSR1P21757 451 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 SDHBP21912 280 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 ZBTB25P24278 435 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 ZNF93P35789 620 aaPredicted RBP6.54□□□□□ -1.36
COL17A1-204ENST00000433822 GNALP38405 381 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 ECI1P42126 302 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 GUCA1AP43080 201 aaPredicted RBP6.54□□□□□ -1.36
COL17A1-204ENST00000433822 CSNK1A1P48729 337 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 MLF1P58340 268 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 MRPS34P82930 218 aaKnown RBP6.54□□□□□ -1.36
COL17A1-204ENST00000433822 SPOCK1Q08629 439 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 UNC119Q13432 240 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 OR2F1Q13607 317 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 LPAL2Q16609 132 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 ODF4Q2M2E3 257 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 ATPAF1Q5TC12 328 aaPredicted RBP6.54□□□□□ -1.36
COL17A1-204ENST00000433822 OR5M10Q6IEU7 315 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 LIN54Q6MZP7 749 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 H3F3CQ6NXT2 135 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 UNQ6494/PRO21346Q6UXR6 183 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 C16orf47Q6ZP98 133 aaPredicted RBP6.54□□□□□ -1.36
COL17A1-204ENST00000433822 CFAP77Q6ZQR2 320 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 IDO2Q6ZQW0 420 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 RFPL4BQ6ZWI9 263 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 SLC16A14Q7RTX9 510 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 SLC51BQ86UW2 128 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 LINC00346Q8IVM7 164 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 C1orf210Q8IVY1 113 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 OR5AS1Q8N127 324 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 TMEM123Q8N131 208 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 MUC20Q8N307 709 aaPredicted RBP6.54□□□□□ -1.36
COL17A1-204ENST00000433822 KDM8Q8N371 416 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 BPIFB2Q8N4F0 458 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 FAM89BQ8N5H3 189 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 EIF4E3Q8N5X7 224 aaKnown RBP6.54□□□□□ -1.36
COL17A1-204ENST00000433822 OR8B12Q8NGG6 310 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 OR5M8Q8NGP6 311 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 OR13C8Q8NGS7 320 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 OR10R2Q8NGX6 335 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 OR6K3Q8NGY3 331 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 OR14K1Q8NGZ2 314 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 SCARB1Q8WTV0 552 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 THAP3Q8WTV1 239 aaPredicted RBP6.54□□□□□ -1.36
COL17A1-204ENST00000433822 TNFAIP8L1Q8WVP5 186 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 KCNE4Q8WWG9 221 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 PPP1R14AQ96A00 147 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 FGGYQ96C11 551 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 ADAT3Q96EY9 351 aaPredicted RBP6.54□□□□□ -1.36
COL17A1-204ENST00000433822 ELMOD3Q96FG2 381 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 C1orf147Q96MC9 270 aaPredicted RBP6.54□□□□□ -1.36
COL17A1-204ENST00000433822 SCGB3A2Q96PL1 93 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 OR5B2Q96R09 309 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 PIGQQ9BRB3 760 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 URM1Q9BTM9 101 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms