RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 C16orf89Q6UX73 402 aa11.74□□□□□ -0.53
SMARCE1-205ENST00000431889 WDR82Q6UXN9 313 aa11.74□□□□□ -0.53
SMARCE1-205ENST00000431889 OR2T33Q8NG76 320 aa11.74□□□□□ -0.53
SMARCE1-205ENST00000431889 ABHD6Q9BV23 337 aa11.74□□□□□ -0.53
SMARCE1-205ENST00000431889 TRIM15Q9C019 465 aa11.74□□□□□ -0.53
SMARCE1-205ENST00000431889 FGF23Q9GZV9 251 aaPredicted RBP11.74□□□□□ -0.53
SMARCE1-205ENST00000431889 CNTD2Q9H8S5 307 aa11.74□□□□□ -0.53
SMARCE1-205ENST00000431889 ELL3Q9HB65 397 aaPredicted RBP11.74□□□□□ -0.53
SMARCE1-205ENST00000431889 NOX4Q9NPH5 578 aa11.74□□□□□ -0.53
SMARCE1-205ENST00000431889 C14orf119Q9NWQ9 140 aa11.74□□□□□ -0.53
SMARCE1-205ENST00000431889 RNF114Q9Y508 228 aa11.74□□□□□ -0.53
SMARCE1-205ENST00000431889 hCG_38984A0A1B0GV85 526 aa11.73□□□□□ -0.53
SMARCE1-205ENST00000431889 CLPSL1A2RUU4 121 aa11.73□□□□□ -0.53
SMARCE1-205ENST00000431889 ZNF850A8MQ14 1090 aa11.73□□□□□ -0.53
SMARCE1-205ENST00000431889 XRCC2O43543 280 aa11.73□□□□□ -0.53
SMARCE1-205ENST00000431889 SELENOFO60613 162 aa11.73□□□□□ -0.53
SMARCE1-205ENST00000431889 POU1F1P28069 291 aa11.73□□□□□ -0.53
SMARCE1-205ENST00000431889 GSK3AP49840 483 aa11.73□□□□□ -0.53
SMARCE1-205ENST00000431889 HCCSP53701 268 aa11.73□□□□□ -0.53
SMARCE1-205ENST00000431889 TAF9Q16594 264 aa11.73□□□□□ -0.53
SMARCE1-205ENST00000431889 TEX36Q5VZQ5 186 aa11.73□□□□□ -0.53
SMARCE1-205ENST00000431889 RPL13AP3Q6NVV1 102 aa11.73□□□□□ -0.53
SMARCE1-205ENST00000431889 KCTD8Q6ZWB6 473 aa11.73□□□□□ -0.53
SMARCE1-205ENST00000431889 RHOUQ7L0Q8 258 aa11.73□□□□□ -0.53
SMARCE1-205ENST00000431889 SPSB4Q96A44 273 aa11.73□□□□□ -0.53
SMARCE1-205ENST00000431889 PGAM5Q96HS1 289 aa11.73□□□□□ -0.53
SMARCE1-205ENST00000431889 CLPTM1LQ96KA5 538 aa11.73□□□□□ -0.53
SMARCE1-205ENST00000431889 FAM71F1Q96KD3 344 aaPredicted RBP11.73□□□□□ -0.53
SMARCE1-205ENST00000431889 ZNF391Q9UJN7 358 aa11.73□□□□□ -0.53
SMARCE1-205ENST00000431889 KLHDC2Q9Y2U9 406 aa11.73□□□□□ -0.53
SMARCE1-205ENST00000431889 NOP16Q9Y3C1 178 aaKnown RBP11.73□□□□□ -0.53
SMARCE1-205ENST00000431889 RIIAD1A6NNX1 92 aa11.72□□□□□ -0.53
SMARCE1-205ENST00000431889 B2RBV5 119 aa11.72□□□□□ -0.53
SMARCE1-205ENST00000431889 H3BN98 237 aa11.72□□□□□ -0.53
SMARCE1-205ENST00000431889 PSMD9O00233 223 aa11.72□□□□□ -0.53
SMARCE1-205ENST00000431889 AKR7A2O43488 359 aa11.72□□□□□ -0.53
SMARCE1-205ENST00000431889 LIPFP07098 398 aa11.72□□□□□ -0.53
SMARCE1-205ENST00000431889 ACKR3P25106 362 aa11.72□□□□□ -0.53
SMARCE1-205ENST00000431889 GSTT1P30711 240 aa11.72□□□□□ -0.53
SMARCE1-205ENST00000431889 IER3P46695 156 aa11.72□□□□□ -0.53
SMARCE1-205ENST00000431889 SLC25A1P53007 311 aa11.72□□□□□ -0.53
SMARCE1-205ENST00000431889 PDCD1Q15116 288 aa11.72□□□□□ -0.53
SMARCE1-205ENST00000431889 MICBQ29980 383 aa11.72□□□□□ -0.53
SMARCE1-205ENST00000431889 MICAQ29983 383 aa11.72□□□□□ -0.53
SMARCE1-205ENST00000431889 PRSS45Q7RTY3 260 aa11.72□□□□□ -0.53
SMARCE1-205ENST00000431889 TMEM179BQ7Z7N9 219 aa11.72□□□□□ -0.53
SMARCE1-205ENST00000431889 OR10G2Q8NGC3 310 aa11.72□□□□□ -0.53
SMARCE1-205ENST00000431889 LINC01006Q8NI28 216 aa11.72□□□□□ -0.53
SMARCE1-205ENST00000431889 TBC1D15Q8TC07 691 aa11.72□□□□□ -0.53
SMARCE1-205ENST00000431889 THEM6Q8WUY1 208 aa11.72□□□□□ -0.53
SMARCE1-205ENST00000431889 SSMEM1Q8WWF3 244 aa11.72□□□□□ -0.53
SMARCE1-205ENST00000431889 PIGCQ92535 297 aa11.72□□□□□ -0.53
SMARCE1-205ENST00000431889 INTS14Q96SY0 518 aa11.72□□□□□ -0.53
SMARCE1-205ENST00000431889 CITED1Q99966 193 aa11.72□□□□□ -0.53
SMARCE1-205ENST00000431889 TTTY10Q9BZA0 68 aa11.72□□□□□ -0.53
SMARCE1-205ENST00000431889 REEP1Q9H902 201 aa11.72□□□□□ -0.53
SMARCE1-205ENST00000431889 ACTR3BQ9P1U1 418 aa11.72□□□□□ -0.53
SMARCE1-205ENST00000431889 MMP24Q9Y5R2 645 aa11.72□□□□□ -0.53
SMARCE1-205ENST00000431889 WNK1Q9H4A3 2382 aa11.72□□□□□ -0.53
SMARCE1-205ENST00000431889 TSPAN15O95858 294 aa11.71□□□□□ -0.53
SMARCE1-205ENST00000431889 H2BFMP0C1H6 154 aa11.71□□□□□ -0.53
SMARCE1-205ENST00000431889 ZNF3P17036 446 aa11.71□□□□□ -0.53
SMARCE1-205ENST00000431889 GNALP38405 381 aa11.71□□□□□ -0.53
SMARCE1-205ENST00000431889 NAA10P41227 235 aaPredicted RBP11.71□□□□□ -0.53
SMARCE1-205ENST00000431889 GRB2P62993 217 aaKnown RBP11.71□□□□□ -0.53
SMARCE1-205ENST00000431889 PRDX4Q13162 271 aa11.71□□□□□ -0.53
SMARCE1-205ENST00000431889 CDONQ4KMG0 1287 aa11.71□□□□□ -0.53
SMARCE1-205ENST00000431889 OR2T5Q6IEZ7 315 aa11.71□□□□□ -0.53
SMARCE1-205ENST00000431889 PLBD1Q6P4A8 553 aa11.71□□□□□ -0.53
SMARCE1-205ENST00000431889 HS3ST5Q8IZT8 346 aa11.71□□□□□ -0.53
SMARCE1-205ENST00000431889 BATF2Q8N1L9 274 aa11.71□□□□□ -0.53
SMARCE1-205ENST00000431889 Q8N7P7 452 aa11.71□□□□□ -0.53
SMARCE1-205ENST00000431889 SPERTQ8NA61 448 aa11.71□□□□□ -0.53
SMARCE1-205ENST00000431889 PLPP7Q8NBV4 271 aa11.71□□□□□ -0.53
SMARCE1-205ENST00000431889 OR2T29Q8NH02 315 aa11.71□□□□□ -0.53
SMARCE1-205ENST00000431889 C17orf50Q8WW18 174 aa11.71□□□□□ -0.53
SMARCE1-205ENST00000431889 CCDC124Q96CT7 223 aaKnown RBP11.71□□□□□ -0.53
SMARCE1-205ENST00000431889 LYZL4Q96KX0 146 aa11.71□□□□□ -0.53
SMARCE1-205ENST00000431889 ARL2BPQ9Y2Y0 163 aa11.71□□□□□ -0.53
SMARCE1-205ENST00000431889 FAM96BQ9Y3D0 163 aa11.71□□□□□ -0.53
SMARCE1-205ENST00000431889 RNASEK-C17orf49H0YIS7 233 aa11.71□□□□□ -0.54
SMARCE1-205ENST00000431889 NDUFA2O43678 99 aa11.71□□□□□ -0.54
SMARCE1-205ENST00000431889 NDUFA7O95182 113 aa11.71□□□□□ -0.54
SMARCE1-205ENST00000431889 IFNGP01579 166 aa11.71□□□□□ -0.54
SMARCE1-205ENST00000431889 GRK5P34947 590 aa11.71□□□□□ -0.54
SMARCE1-205ENST00000431889 MAGEA2P43356 314 aa11.71□□□□□ -0.54
SMARCE1-205ENST00000431889 SLC15A1P46059 708 aa11.71□□□□□ -0.54
SMARCE1-205ENST00000431889 CEP78Q5JTW2 689 aa11.71□□□□□ -0.54
SMARCE1-205ENST00000431889 TEX30Q5JUR7 227 aa11.71□□□□□ -0.54
SMARCE1-205ENST00000431889 ASPHD2Q6ICH7 369 aa11.71□□□□□ -0.54
SMARCE1-205ENST00000431889 Q6ZSV7 163 aa11.71□□□□□ -0.54
SMARCE1-205ENST00000431889 BBS1Q8NFJ9 593 aa11.71□□□□□ -0.54
SMARCE1-205ENST00000431889 FAM110DQ8TAY7 271 aaPredicted RBP11.71□□□□□ -0.54
SMARCE1-205ENST00000431889 TEX47Q8TBZ9 253 aa11.71□□□□□ -0.54
SMARCE1-205ENST00000431889 RNF133Q8WVZ7 376 aa11.71□□□□□ -0.54
SMARCE1-205ENST00000431889 FEVQ99581 238 aa11.71□□□□□ -0.54
SMARCE1-205ENST00000431889 RBM4BQ9BQ04 359 aaKnown RBP11.71□□□□□ -0.54
SMARCE1-205ENST00000431889 OR10A2Q9H208 303 aa11.71□□□□□ -0.54
SMARCE1-205ENST00000431889 TRIM36Q9NQ86 728 aa11.71□□□□□ -0.54
SMARCE1-205ENST00000431889 PRPF19Q9UMS4 504 aaKnown RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms