RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 GUCA2AQ02747 115 aa12.28□□□□□ -0.44
MSH5-208ENST00000429846 EIF2B1Q14232 305 aaKnown RBP12.28□□□□□ -0.44
MSH5-208ENST00000429846 GK3PQ14409 553 aa12.28□□□□□ -0.44
MSH5-208ENST00000429846 WDR38Q5JTN6 314 aa12.28□□□□□ -0.44
MSH5-208ENST00000429846 LINC01590Q5TEZ4 76 aa12.28□□□□□ -0.44
MSH5-208ENST00000429846 WDR82Q6UXN9 313 aa12.28□□□□□ -0.44
MSH5-208ENST00000429846 CYP2R1Q6VVX0 501 aa12.28□□□□□ -0.44
MSH5-208ENST00000429846 GDPGP1Q6ZNW5 385 aa12.28□□□□□ -0.44
MSH5-208ENST00000429846 SHFQ7M4L6 423 aa12.28□□□□□ -0.44
MSH5-208ENST00000429846 VMO1Q7Z5L0 202 aa12.28□□□□□ -0.44
MSH5-208ENST00000429846 C11orf53Q8IXP5 236 aa12.28□□□□□ -0.44
MSH5-208ENST00000429846 LY6G5BQ8NDX9 201 aa12.28□□□□□ -0.44
MSH5-208ENST00000429846 OR6N2Q8NGY6 317 aa12.28□□□□□ -0.44
MSH5-208ENST00000429846 OR4Q3Q8NH05 313 aa12.28□□□□□ -0.44
MSH5-208ENST00000429846 CCT8L2Q96SF2 557 aa12.28□□□□□ -0.44
MSH5-208ENST00000429846 PAPOLGQ9BWT3 736 aaKnown RBP12.28□□□□□ -0.44
MSH5-208ENST00000429846 DNTTIP1Q9H147 329 aa12.28□□□□□ -0.44
MSH5-208ENST00000429846 TLNRD1Q9H1K6 362 aa12.28□□□□□ -0.44
MSH5-208ENST00000429846 OR10A2Q9H208 303 aa12.28□□□□□ -0.44
MSH5-208ENST00000429846 ABCB9Q9NP78 766 aa12.28□□□□□ -0.44
MSH5-208ENST00000429846 CMC2Q9NRP2 79 aa12.28□□□□□ -0.44
MSH5-208ENST00000429846 PRPF19Q9UMS4 504 aaKnown RBP12.28□□□□□ -0.44
MSH5-208ENST00000429846 FAM96BQ9Y3D0 163 aa12.28□□□□□ -0.44
MSH5-208ENST00000429846 RNF114Q9Y508 228 aa12.28□□□□□ -0.44
MSH5-208ENST00000429846 IGHV3OR15-7A0A075B7D8 119 aa12.27□□□□□ -0.45
MSH5-208ENST00000429846 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.27□□□□□ -0.45
MSH5-208ENST00000429846 DCTN3O75935 186 aa12.27□□□□□ -0.45
MSH5-208ENST00000429846 CLPXO76031 633 aa12.27□□□□□ -0.45
MSH5-208ENST00000429846 SOX14O95416 240 aa12.27□□□□□ -0.45
MSH5-208ENST00000429846 IGHV4-59P01825 116 aa12.27□□□□□ -0.45
MSH5-208ENST00000429846 FBP1P09467 338 aa12.27□□□□□ -0.45
MSH5-208ENST00000429846 CLUP10909 449 aa12.27□□□□□ -0.45
MSH5-208ENST00000429846 ATP6V1B2P21281 511 aa12.27□□□□□ -0.45
MSH5-208ENST00000429846 SRSF4Q08170 494 aaKnown RBP12.27□□□□□ -0.45
MSH5-208ENST00000429846 MICAQ29983 383 aa12.27□□□□□ -0.45
MSH5-208ENST00000429846 LRRC10Q5BKY1 277 aa12.27□□□□□ -0.45
MSH5-208ENST00000429846 OR2T5Q6IEZ7 315 aa12.27□□□□□ -0.45
MSH5-208ENST00000429846 PRSS45Q7RTY3 260 aa12.27□□□□□ -0.45
MSH5-208ENST00000429846 ARHGAP24Q8N264 748 aa12.27□□□□□ -0.45
MSH5-208ENST00000429846 PIP4P2Q8N4L2 257 aa12.27□□□□□ -0.45
MSH5-208ENST00000429846 OR2T29Q8NH02 315 aa12.27□□□□□ -0.45
MSH5-208ENST00000429846 LINC01006Q8NI28 216 aa12.27□□□□□ -0.45
MSH5-208ENST00000429846 SGK3Q96BR1 496 aa12.27□□□□□ -0.45
MSH5-208ENST00000429846 CCL13Q99616 98 aa12.27□□□□□ -0.45
MSH5-208ENST00000429846 ABHD6Q9BV23 337 aa12.27□□□□□ -0.45
MSH5-208ENST00000429846 REEP1Q9H902 201 aa12.27□□□□□ -0.45
MSH5-208ENST00000429846 ARL8BQ9NVJ2 186 aa12.27□□□□□ -0.45
MSH5-208ENST00000429846 ARMC1Q9NVT9 282 aa12.27□□□□□ -0.45
MSH5-208ENST00000429846 ZNRD1Q9P1U0 126 aa12.27□□□□□ -0.45
MSH5-208ENST00000429846 ARL2BPQ9Y2Y0 163 aa12.27□□□□□ -0.45
MSH5-208ENST00000429846 MPC1Q9Y5U8 109 aa12.27□□□□□ -0.45
MSH5-208ENST00000429846 BTBD17A6NE02 478 aa12.26□□□□□ -0.45
MSH5-208ENST00000429846 TMEM210A6NLX4 147 aa12.26□□□□□ -0.45
MSH5-208ENST00000429846 ATP8B1O43520 1251 aa12.26□□□□□ -0.45
MSH5-208ENST00000429846 NDUFB3O43676 98 aa12.26□□□□□ -0.45
MSH5-208ENST00000429846 EEF1B2P24534 225 aaKnown RBP12.26□□□□□ -0.45
MSH5-208ENST00000429846 OPRL1P41146 370 aa12.26□□□□□ -0.45
MSH5-208ENST00000429846 GSK3AP49840 483 aa12.26□□□□□ -0.45
MSH5-208ENST00000429846 ZNF121P58317 390 aaPredicted RBP12.26□□□□□ -0.45
MSH5-208ENST00000429846 CSNK2BP67870 215 aa12.26□□□□□ -0.45
MSH5-208ENST00000429846 POU4F2Q12837 409 aa12.26□□□□□ -0.45
MSH5-208ENST00000429846 ATPAF1Q5TC12 328 aaPredicted RBP12.26□□□□□ -0.45
MSH5-208ENST00000429846 STUMQ69YW2 141 aa12.26□□□□□ -0.45
MSH5-208ENST00000429846 LCN8Q6JVE9 175 aa12.26□□□□□ -0.45
MSH5-208ENST00000429846 CD300LDQ6UXZ3 194 aa12.26□□□□□ -0.45
MSH5-208ENST00000429846 FAM57BQ71RH2 274 aa12.26□□□□□ -0.45
MSH5-208ENST00000429846 ERI1Q8IV48 349 aaKnown RBP12.26□□□□□ -0.45
MSH5-208ENST00000429846 GALNT4Q8N4A0 578 aa12.26□□□□□ -0.45
MSH5-208ENST00000429846 FAM216BQ8N7L0 139 aa12.26□□□□□ -0.45
MSH5-208ENST00000429846 OR10Z1Q8NGY1 313 aa12.26□□□□□ -0.45
MSH5-208ENST00000429846 C8orf46Q8TAG6 207 aa12.26□□□□□ -0.45
MSH5-208ENST00000429846 TEX47Q8TBZ9 253 aa12.26□□□□□ -0.45
MSH5-208ENST00000429846 ITPKCQ96DU7 683 aa12.26□□□□□ -0.45
MSH5-208ENST00000429846 MICU1Q9BPX6 476 aa12.26□□□□□ -0.45
MSH5-208ENST00000429846 DCTN5Q9BTE1 182 aa12.26□□□□□ -0.45
MSH5-208ENST00000429846 RTL8AQ9BWD3 113 aa12.26□□□□□ -0.45
MSH5-208ENST00000429846 DNAJC27Q9NZQ0 273 aa12.26□□□□□ -0.45
MSH5-208ENST00000429846 ONECUT1Q9UBC0 465 aa12.26□□□□□ -0.45
MSH5-208ENST00000429846 ZNF391Q9UJN7 358 aa12.26□□□□□ -0.45
MSH5-208ENST00000429846 SAMHD1Q9Y3Z3 626 aaKnown RBP12.26□□□□□ -0.45
MSH5-208ENST00000429846 NOTCH1P46531 2555 aa12.25□□□□□ -0.45
MSH5-208ENST00000429846 VWFP04275 2813 aa12.25□□□□□ -0.45
MSH5-208ENST00000429846 A0A1B0GW55 424 aa12.25□□□□□ -0.45
MSH5-208ENST00000429846 TCRBV5S2A0A599 114 aa12.25□□□□□ -0.45
MSH5-208ENST00000429846 NKX6-3A6NJ46 265 aa12.25□□□□□ -0.45
MSH5-208ENST00000429846 CDIPTO14735 213 aa12.25□□□□□ -0.45
MSH5-208ENST00000429846 GLCEO94923 617 aa12.25□□□□□ -0.45
MSH5-208ENST00000429846 H2BFMP0C1H6 154 aa12.25□□□□□ -0.45
MSH5-208ENST00000429846 DUX4L2P0CJ85 424 aa12.25□□□□□ -0.45
MSH5-208ENST00000429846 DUX4L3P0CJ86 424 aa12.25□□□□□ -0.45
MSH5-208ENST00000429846 DUX4L4P0CJ87 422 aa12.25□□□□□ -0.45
MSH5-208ENST00000429846 DUX4L5P0CJ88 424 aa12.25□□□□□ -0.45
MSH5-208ENST00000429846 DUX4L6P0CJ89 424 aa12.25□□□□□ -0.45
MSH5-208ENST00000429846 DUX4L7P0CJ90 424 aa12.25□□□□□ -0.45
MSH5-208ENST00000429846 PAICSP22234 425 aaKnown RBP12.25□□□□□ -0.45
MSH5-208ENST00000429846 GSTT1P30711 240 aa12.25□□□□□ -0.45
MSH5-208ENST00000429846 PROK1P58294 105 aa12.25□□□□□ -0.45
MSH5-208ENST00000429846 GFOD2Q3B7J2 385 aa12.25□□□□□ -0.45
MSH5-208ENST00000429846 FAM98BQ52LJ0 330 aaKnown RBP12.25□□□□□ -0.45
MSH5-208ENST00000429846 KLHL12Q53G59 568 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms