RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 Q499Y3 187 aa9.5□□□□□ -0.89
TCOF1-204ENST00000427724 C1orf185Q5T7R7 199 aa9.5□□□□□ -0.89
TCOF1-204ENST00000427724 OR51T1Q8NGJ9 327 aa9.5□□□□□ -0.89
TCOF1-204ENST00000427724 OR52B4Q8NGK2 314 aa9.5□□□□□ -0.89
TCOF1-204ENST00000427724 LILRB1Q8NHL6 650 aaPredicted RBP9.5□□□□□ -0.89
TCOF1-204ENST00000427724 TECTBQ96PL2 329 aa9.5□□□□□ -0.89
TCOF1-204ENST00000427724 ZNF700Q9H0M5 742 aa9.5□□□□□ -0.89
TCOF1-204ENST00000427724 ZNF355PQ9NSJ1 428 aa9.5□□□□□ -0.89
TCOF1-204ENST00000427724 ANKRD36A6QL64 1941 aa9.5□□□□□ -0.89
TCOF1-204ENST00000427724 MEGF11A6BM72 1044 aa9.49□□□□□ -0.89
TCOF1-204ENST00000427724 ZNHIT1O43257 154 aa9.49□□□□□ -0.89
TCOF1-204ENST00000427724 CFDP00746 253 aaPredicted RBP9.49□□□□□ -0.89
TCOF1-204ENST00000427724 SERPINA5P05154 406 aa9.49□□□□□ -0.89
TCOF1-204ENST00000427724 LPLP06858 475 aa9.49□□□□□ -0.89
TCOF1-204ENST00000427724 AKAIN1P0CW23 69 aa9.49□□□□□ -0.89
TCOF1-204ENST00000427724 APEHP13798 732 aaKnown RBP9.49□□□□□ -0.89
TCOF1-204ENST00000427724 SERPINA2P20848 420 aa9.49□□□□□ -0.89
TCOF1-204ENST00000427724 GNRHRP30968 328 aa9.49□□□□□ -0.89
TCOF1-204ENST00000427724 CDK5R1Q15078 307 aa9.49□□□□□ -0.89
TCOF1-204ENST00000427724 CHRFAM7AQ494W8 412 aa9.49□□□□□ -0.89
TCOF1-204ENST00000427724 ZNF529Q6P280 563 aa9.49□□□□□ -0.89
TCOF1-204ENST00000427724 LSRQ86X29 649 aaPredicted RBP9.49□□□□□ -0.89
TCOF1-204ENST00000427724 ZGRF1Q86YA3 2104 aa9.49□□□□□ -0.89
TCOF1-204ENST00000427724 C9orf40Q8IXQ3 194 aa9.49□□□□□ -0.89
TCOF1-204ENST00000427724 ARIH2OSQ8N7S6 290 aa9.49□□□□□ -0.89
TCOF1-204ENST00000427724 ABHD3Q8WU67 409 aa9.49□□□□□ -0.89
TCOF1-204ENST00000427724 PSMF1Q92530 271 aa9.49□□□□□ -0.89
TCOF1-204ENST00000427724 MAN2C1Q9NTJ4 1040 aa9.49□□□□□ -0.89
TCOF1-204ENST00000427724 KLK11Q9UBX7 282 aa9.49□□□□□ -0.89
TCOF1-204ENST00000427724 CSF1P09603 554 aa9.49□□□□□ -0.89
TCOF1-204ENST00000427724 PATE4P0C8F1 98 aa9.49□□□□□ -0.89
TCOF1-204ENST00000427724 EPXP11678 715 aa9.49□□□□□ -0.89
TCOF1-204ENST00000427724 SLC6A1P30531 599 aa9.49□□□□□ -0.89
TCOF1-204ENST00000427724 LIMS1P48059 325 aa9.49□□□□□ -0.89
TCOF1-204ENST00000427724 SLC16A13Q7RTY0 426 aa9.49□□□□□ -0.89
TCOF1-204ENST00000427724 FAM71CQ8NEG0 241 aa9.49□□□□□ -0.89
TCOF1-204ENST00000427724 OR10Z1Q8NGY1 313 aa9.49□□□□□ -0.89
TCOF1-204ENST00000427724 MARC2Q969Z3 335 aa9.49□□□□□ -0.89
TCOF1-204ENST00000427724 KTI12Q96EK9 354 aaPredicted RBP9.49□□□□□ -0.89
TCOF1-204ENST00000427724 COL4A6Q14031 1691 aa9.49□□□□□ -0.89
TCOF1-204ENST00000427724 A0A087WUJ7 227 aa9.49□□□□□ -0.89
TCOF1-204ENST00000427724 GIPP09681 153 aaPredicted RBP9.49□□□□□ -0.89
TCOF1-204ENST00000427724 AMY2BP19961 511 aa9.49□□□□□ -0.89
TCOF1-204ENST00000427724 PTGER4P35408 488 aa9.49□□□□□ -0.89
TCOF1-204ENST00000427724 RAC3P60763 192 aa9.49□□□□□ -0.89
TCOF1-204ENST00000427724 IKZF1Q13422 519 aa9.49□□□□□ -0.89
TCOF1-204ENST00000427724 SMIM19Q96E16 107 aa9.49□□□□□ -0.89
TCOF1-204ENST00000427724 RAB1BQ9H0U4 201 aa9.49□□□□□ -0.89
TCOF1-204ENST00000427724 PLEKHJ1Q9NW61 149 aa9.49□□□□□ -0.89
TCOF1-204ENST00000427724 IGKV1-8A0A0C4DH67 115 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 RAC2P15153 192 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 CDAP32320 146 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 MECP2P51608 486 aaKnown RBP9.48□□□□□ -0.89
TCOF1-204ENST00000427724 TLE1Q04724 770 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 TOMM34Q15785 309 aaPredicted RBP9.48□□□□□ -0.89
TCOF1-204ENST00000427724 SSX9Q7RTT3 188 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 ACBD4Q8NC06 268 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 OR1M1Q8NGA1 313 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 PIGTQ969N2 578 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 CHODLQ9H9P2 273 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 SIGLEC7Q9Y286 467 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 PCDHGA9Q9Y5G4 932 aaKnown RBP9.48□□□□□ -0.89
TCOF1-204ENST00000427724 PATJQ8NI35 1801 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 ZNF736B4DX44 427 aaPredicted RBP9.48□□□□□ -0.89
TCOF1-204ENST00000427724 LANCL1O43813 399 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 SPI1P17947 270 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 PTAFRP25105 342 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 SELENOPP49908 381 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 PPT1P50897 306 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 RBMS2Q15434 407 aaKnown RBP9.48□□□□□ -0.89
TCOF1-204ENST00000427724 NPSR1Q6W5P4 371 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 C14orf79Q96F83 325 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 SCARF2Q96GP6 870 aaPredicted RBP9.48□□□□□ -0.89
TCOF1-204ENST00000427724 TCEAL7Q9BRU2 100 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 TGIF2Q9GZN2 237 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 TNFRSF19Q9NS68 423 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 MEIKINA0A087WXM9 373 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 A0A0B4J2A0 478 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 M0R135 149 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 AIPO00170 330 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 P2RY10O00398 339 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 WDR1O75083 606 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 DIRAS3O95661 229 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 IFNA21P01568 189 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 GSTP1P09211 210 aaKnown RBP9.48□□□□□ -0.89
TCOF1-204ENST00000427724 CDK2P24941 298 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 ALKBH1Q13686 389 aaKnown RBP9.48□□□□□ -0.89
TCOF1-204ENST00000427724 ADAM5Q6NVV9 412 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 ZNF799Q96GE5 643 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 SIGLEC11Q96RL6 698 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 ZNF649Q9BS31 505 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 MRI1Q9BV20 369 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 RAB9BQ9NP90 201 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 SHPKQ9UHJ6 478 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 CCSO14618 274 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 GLCEO94923 617 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 HLA-AP01891 365 aaKnown RBP9.48□□□□□ -0.89
TCOF1-204ENST00000427724 FABP1P07148 127 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 DCTDP32321 178 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms