RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 TFAP2AP05549 437 aa13.16□□□□□ -0.3
COL11A1-204ENST00000427239 PRSS12P56730 875 aa13.16□□□□□ -0.3
COL11A1-204ENST00000427239 SSX1Q16384 188 aa13.16□□□□□ -0.3
COL11A1-204ENST00000427239 TMEM255AQ5JRV8 349 aa13.16□□□□□ -0.3
COL11A1-204ENST00000427239 HIST2H2BCQ6DN03 193 aa13.16□□□□□ -0.3
COL11A1-204ENST00000427239 SERPINA12Q8IW75 414 aa13.16□□□□□ -0.3
COL11A1-204ENST00000427239 OR5AS1Q8N127 324 aa13.16□□□□□ -0.3
COL11A1-204ENST00000427239 OR10AC1Q8NH08 325 aa13.16□□□□□ -0.3
COL11A1-204ENST00000427239 TSEN15Q8WW01 171 aaKnown RBP13.16□□□□□ -0.3
COL11A1-204ENST00000427239 PP6455Q8WZ26 134 aa13.16□□□□□ -0.3
COL11A1-204ENST00000427239 RGP1Q92546 391 aaPredicted RBP13.16□□□□□ -0.3
COL11A1-204ENST00000427239 SLC30A2Q9BRI3 323 aa13.16□□□□□ -0.3
COL11A1-204ENST00000427239 TMED9Q9BVK6 235 aa13.16□□□□□ -0.3
COL11A1-204ENST00000427239 ZDHHC8Q9ULC8 765 aa13.16□□□□□ -0.3
COL11A1-204ENST00000427239 LAMP3Q9UQV4 416 aa13.16□□□□□ -0.3
COL11A1-204ENST00000427239 SF3B6Q9Y3B4 125 aaKnown RBP13.16□□□□□ -0.3
COL11A1-204ENST00000427239 MPC1Q9Y5U8 109 aa13.16□□□□□ -0.3
COL11A1-204ENST00000427239 APCP25054 2843 aa13.16□□□□□ -0.3
COL11A1-204ENST00000427239 TRBV5-5A0A0J9YX44 114 aa13.16□□□□□ -0.3
COL11A1-204ENST00000427239 A0A1B0GWJ7 208 aa13.16□□□□□ -0.3
COL11A1-204ENST00000427239 H3BSH0 61 aa13.16□□□□□ -0.3
COL11A1-204ENST00000427239 GATBO75879 557 aaKnown RBP13.16□□□□□ -0.3
COL11A1-204ENST00000427239 RAF1P04049 648 aa13.16□□□□□ -0.3
COL11A1-204ENST00000427239 SOD3P08294 240 aa13.16□□□□□ -0.3
COL11A1-204ENST00000427239 MAPK3P27361 379 aaPredicted RBP13.16□□□□□ -0.3
COL11A1-204ENST00000427239 PARP16Q8N5Y8 322 aa13.16□□□□□ -0.3
COL11A1-204ENST00000427239 OR5D14Q8NGL3 314 aa13.16□□□□□ -0.3
COL11A1-204ENST00000427239 PIGTQ969N2 578 aa13.16□□□□□ -0.3
COL11A1-204ENST00000427239 TMEM203Q969S6 136 aa13.16□□□□□ -0.3
COL11A1-204ENST00000427239 TMEM106AQ96A25 262 aa13.16□□□□□ -0.3
COL11A1-204ENST00000427239 FGGYQ96C11 551 aa13.16□□□□□ -0.3
COL11A1-204ENST00000427239 DIRC2Q96SL1 478 aa13.16□□□□□ -0.3
COL11A1-204ENST00000427239 TRAF4Q9BUZ4 470 aaPredicted RBP13.16□□□□□ -0.3
COL11A1-204ENST00000427239 ABCB9Q9NP78 766 aa13.16□□□□□ -0.3
COL11A1-204ENST00000427239 RHBDD3Q9Y3P4 386 aa13.16□□□□□ -0.3
COL11A1-204ENST00000427239 UNC79Q9P2D8 2635 aa13.15□□□□□ -0.3
COL11A1-204ENST00000427239 ZNF879B4DU55 563 aa13.15□□□□□ -0.3
COL11A1-204ENST00000427239 HAX1O00165 279 aa13.15□□□□□ -0.3
COL11A1-204ENST00000427239 SC5DO75845 299 aa13.15□□□□□ -0.3
COL11A1-204ENST00000427239 FAHP16930 419 aa13.15□□□□□ -0.3
COL11A1-204ENST00000427239 ZNF20P17024 532 aa13.15□□□□□ -0.3
COL11A1-204ENST00000427239 GALP22466 123 aa13.15□□□□□ -0.3
COL11A1-204ENST00000427239 GNALP38405 381 aa13.15□□□□□ -0.3
COL11A1-204ENST00000427239 RPL5P46777 297 aaKnown RBP13.15□□□□□ -0.3
COL11A1-204ENST00000427239 ZNF81P51508 661 aa13.15□□□□□ -0.3
COL11A1-204ENST00000427239 ACSM3Q53FZ2 586 aa13.15□□□□□ -0.3
COL11A1-204ENST00000427239 CLVS2Q5SYC1 327 aa13.15□□□□□ -0.3
COL11A1-204ENST00000427239 TMEM42Q69YG0 159 aa13.15□□□□□ -0.3
COL11A1-204ENST00000427239 C11orf71Q6IPW1 123 aa13.15□□□□□ -0.3
COL11A1-204ENST00000427239 SPERTQ8NA61 448 aa13.15□□□□□ -0.3
COL11A1-204ENST00000427239 PHYHIPQ92561 330 aa13.15□□□□□ -0.3
COL11A1-204ENST00000427239 DYNLRB1Q9NP97 96 aa13.15□□□□□ -0.3
COL11A1-204ENST00000427239 LILRA1O75019 489 aa13.14□□□□□ -0.31
COL11A1-204ENST00000427239 NRASP01111 189 aa13.14□□□□□ -0.31
COL11A1-204ENST00000427239 ADH4P08319 380 aa13.14□□□□□ -0.31
COL11A1-204ENST00000427239 CA6P23280 308 aa13.14□□□□□ -0.31
COL11A1-204ENST00000427239 ALDH3B1P43353 468 aa13.14□□□□□ -0.31
COL11A1-204ENST00000427239 PPOXP50336 477 aa13.14□□□□□ -0.31
COL11A1-204ENST00000427239 CD200R1LQ6Q8B3 271 aa13.14□□□□□ -0.31
COL11A1-204ENST00000427239 PAMR1Q6UXH9 720 aa13.14□□□□□ -0.31
COL11A1-204ENST00000427239 UNQ9370/PRO34162Q6UXP9 181 aa13.14□□□□□ -0.31
COL11A1-204ENST00000427239 PIGCQ92535 297 aa13.14□□□□□ -0.31
COL11A1-204ENST00000427239 TECTBQ96PL2 329 aa13.14□□□□□ -0.31
COL11A1-204ENST00000427239 HIST1H2AAQ96QV6 131 aa13.14□□□□□ -0.31
COL11A1-204ENST00000427239 PAPOLGQ9BWT3 736 aaKnown RBP13.14□□□□□ -0.31
COL11A1-204ENST00000427239 MSL2Q9HCI7 577 aa13.14□□□□□ -0.31
COL11A1-204ENST00000427239 ANKRD61A6NGH8 418 aa13.13□□□□□ -0.31
COL11A1-204ENST00000427239 C17orf100A8MU93 164 aa13.13□□□□□ -0.31
COL11A1-204ENST00000427239 PRF1P14222 555 aa13.13□□□□□ -0.31
COL11A1-204ENST00000427239 CD36P16671 472 aa13.13□□□□□ -0.31
COL11A1-204ENST00000427239 SOX2P48431 317 aa13.13□□□□□ -0.31
COL11A1-204ENST00000427239 ALDH3B2P48448 385 aa13.13□□□□□ -0.31
COL11A1-204ENST00000427239 RPS25P62851 125 aaKnown RBP13.13□□□□□ -0.31
COL11A1-204ENST00000427239 PCGF3Q3KNV8 242 aa13.13□□□□□ -0.31
COL11A1-204ENST00000427239 Q6ZR03 302 aa13.13□□□□□ -0.31
COL11A1-204ENST00000427239 UTS2BQ765I0 119 aa13.13□□□□□ -0.31
COL11A1-204ENST00000427239 OR13F1Q8NGS4 319 aa13.13□□□□□ -0.31
COL11A1-204ENST00000427239 OR13C5Q8NGS8 318 aa13.13□□□□□ -0.31
COL11A1-204ENST00000427239 ADAT3Q96EY9 351 aaPredicted RBP13.13□□□□□ -0.31
COL11A1-204ENST00000427239 OR14A2Q96R54 314 aa13.13□□□□□ -0.31
COL11A1-204ENST00000427239 CHST5Q9GZS9 411 aa13.13□□□□□ -0.31
COL11A1-204ENST00000427239 NBPF19A0A087WUL8 3843 aa13.13□□□□□ -0.31
COL11A1-204ENST00000427239 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.13□□□□□ -0.31
COL11A1-204ENST00000427239 A6NIN4 97 aa13.13□□□□□ -0.31
COL11A1-204ENST00000427239 ANXA2P2A6NMY6 339 aa13.13□□□□□ -0.31
COL11A1-204ENST00000427239 ZNF850A8MQ14 1090 aa13.13□□□□□ -0.31
COL11A1-204ENST00000427239 LMX1BO60663 402 aa13.13□□□□□ -0.31
COL11A1-204ENST00000427239 RGS9O75916 674 aaPredicted RBP13.13□□□□□ -0.31
COL11A1-204ENST00000427239 ALX3O95076 343 aa13.13□□□□□ -0.31
COL11A1-204ENST00000427239 ERCC1P07992 297 aaPredicted RBP13.13□□□□□ -0.31
COL11A1-204ENST00000427239 NAT2P11245 290 aa13.13□□□□□ -0.31
COL11A1-204ENST00000427239 TNFSF4P23510 183 aa13.13□□□□□ -0.31
COL11A1-204ENST00000427239 MAGEB1P43366 347 aa13.13□□□□□ -0.31
COL11A1-204ENST00000427239 FABP5Q01469 135 aa13.13□□□□□ -0.31
COL11A1-204ENST00000427239 MZT1Q08AG7 82 aa13.13□□□□□ -0.31
COL11A1-204ENST00000427239 OR8G1Q15617 311 aa13.13□□□□□ -0.31
COL11A1-204ENST00000427239 CEACAM21Q3KPI0 293 aa13.13□□□□□ -0.31
COL11A1-204ENST00000427239 TIMM50Q3ZCQ8 353 aa13.13□□□□□ -0.31
COL11A1-204ENST00000427239 FOXB2Q5VYV0 432 aa13.13□□□□□ -0.31
COL11A1-204ENST00000427239 CEACAM19Q7Z692 300 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms