RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 NMNAT3Q96T66 252 aa4.68□□□□□ -1.66
C9orf3-205ENST00000427193 APOL4Q9BPW4 351 aa4.68□□□□□ -1.66
C9orf3-205ENST00000427193 TTYH2Q9BSA4 534 aa4.68□□□□□ -1.66
C9orf3-205ENST00000427193 NAA11Q9BSU3 229 aaPredicted RBP4.68□□□□□ -1.66
C9orf3-205ENST00000427193 YTHDF1Q9BYJ9 559 aaKnown RBP4.68□□□□□ -1.66
C9orf3-205ENST00000427193 LINC00470Q9BZP3 86 aa4.68□□□□□ -1.66
C9orf3-205ENST00000427193 RACGAP1Q9H0H5 632 aa4.68□□□□□ -1.66
C9orf3-205ENST00000427193 ZNF696Q9H7X3 374 aa4.68□□□□□ -1.66
C9orf3-205ENST00000427193 CHODLQ9H9P2 273 aa4.68□□□□□ -1.66
C9orf3-205ENST00000427193 SCRT2Q9NQ03 307 aa4.68□□□□□ -1.66
C9orf3-205ENST00000427193 PAK1IP1Q9NWT1 392 aaPredicted RBP4.68□□□□□ -1.66
C9orf3-205ENST00000427193 MED29Q9NX70 200 aa4.68□□□□□ -1.66
C9orf3-205ENST00000427193 TVP23BQ9NYZ1 205 aa4.68□□□□□ -1.66
C9orf3-205ENST00000427193 KLHL9Q9P2J3 617 aa4.68□□□□□ -1.66
C9orf3-205ENST00000427193 AASSQ9UDR5 926 aa4.68□□□□□ -1.66
C9orf3-205ENST00000427193 PSORS1C1Q9UIG5 152 aa4.68□□□□□ -1.66
C9orf3-205ENST00000427193 KLHL21Q9UJP4 597 aa4.68□□□□□ -1.66
C9orf3-205ENST00000427193 MCTS1Q9ULC4 181 aaKnown RBP4.68□□□□□ -1.66
C9orf3-205ENST00000427193 EXOGQ9Y2C4 368 aaKnown RBP4.68□□□□□ -1.66
C9orf3-205ENST00000427193 ORC6Q9Y5N6 252 aa4.68□□□□□ -1.66
C9orf3-205ENST00000427193 FKBP7Q9Y680 259 aa4.68□□□□□ -1.66
C9orf3-205ENST00000427193 PRR14LQ5THK1 2151 aa4.68□□□□□ -1.66
C9orf3-205ENST00000427193 ROS1P08922 2347 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 A0A1W2PRG6 482 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 A0A1W2PS18 150 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 FAM183AA6NL82 134 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 C11orf98E9PRG8 122 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 CCL21O00585 134 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 BCL10O95999 233 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 TFP02787 698 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 CLUP10909 449 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 PSKH1P11801 424 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 SPI1P17947 270 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 COX5AP20674 150 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 AHCYP23526 432 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 POU1F1P28069 291 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 HTR1FP30939 366 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 ACVR1BP36896 505 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 CA7P43166 264 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 OR3A2P47893 321 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 BIDP55957 195 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 HIST1H3AP68431 136 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 SRYQ05066 204 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.67□□□□□ -1.66
C9orf3-205ENST00000427193 RASGEF1BQ0VAM2 473 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 MED21Q13503 144 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 APOFQ13790 326 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 SNAPC1Q16533 368 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 TIGD6Q17RP2 521 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 KCTD21Q4G0X4 260 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 SLC35D3Q5M8T2 416 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 THEM4Q5T1C6 240 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 ZNF684Q5T5D7 378 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 C1orf185Q5T7R7 199 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 HIST2H3PS2Q5TEC6 136 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 TMEM225Q6GV28 225 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 PLBD1Q6P4A8 553 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 TFAP2EQ6VUC0 442 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 HIST2H3AQ71DI3 136 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 NUFIP2Q7Z417 695 aaKnown RBP4.67□□□□□ -1.66
C9orf3-205ENST00000427193 HDDC2Q7Z4H3 204 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 CPOQ8IVL8 374 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 TUSC5Q8IXB3 177 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 PHC2Q8IXK0 858 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 C8orf59Q8N0T1 100 aaPredicted RBP4.67□□□□□ -1.66
C9orf3-205ENST00000427193 GABRG1Q8N1C3 465 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 C10orf53Q8N6V4 93 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 CYB561A3Q8NBI2 242 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 ZNF555Q8NEP9 628 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 SDR9C7Q8NEX9 313 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 NOXO1Q8NFA2 376 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 SLC26A10Q8NG04 563 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 OR52E2Q8NGJ4 325 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 OR5M9Q8NGP3 310 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 OR13A1Q8NGR1 328 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 CNIH3Q8TBE1 160 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 FNDC8Q8TC99 324 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 SGCDQ92629 289 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 NABP1Q96AH0 204 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 ZHX1-C8orf76Q96EF9 292 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 TSSK2Q96PF2 358 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 SLC38A2Q96QD8 506 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 NR1H4Q96RI1 486 aaPredicted RBP4.67□□□□□ -1.66
C9orf3-205ENST00000427193 IL4I1Q96RQ9 567 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 TEAD3Q99594 435 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 RHNO1Q9BSD3 238 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 EMC6Q9BV81 110 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 SYT4Q9H2B2 425 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 ADGRL4Q9HBW9 690 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 FGF20Q9NP95 211 aaPredicted RBP4.67□□□□□ -1.66
C9orf3-205ENST00000427193 MRPL22Q9NWU5 206 aaKnown RBP4.67□□□□□ -1.66
C9orf3-205ENST00000427193 GLTPQ9NZD2 209 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 CNOT2Q9NZN8 540 aaKnown RBP4.67□□□□□ -1.66
C9orf3-205ENST00000427193 GRHPRQ9UBQ7 328 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 B9D1Q9UPM9 204 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 MOKQ9UQ07 419 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 CAMK2AQ9UQM7 478 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 GPR52Q9Y2T5 361 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 ARID1AO14497 2285 aa4.67□□□□□ -1.66
C9orf3-205ENST00000427193 PLCE1Q9P212 2302 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms