RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 OR8D4Q8NGM9 314 aa12.35□□□□□ -0.43
RPL28-202ENST00000426763 EDARADDQ8WWZ3 215 aa12.35□□□□□ -0.43
RPL28-202ENST00000426763 MRPS18BQ9Y676 258 aaKnown RBP12.35□□□□□ -0.43
RPL28-202ENST00000426763 A0A0B4J203 849 aa12.35□□□□□ -0.43
RPL28-202ENST00000426763 WDR1O75083 606 aa12.35□□□□□ -0.43
RPL28-202ENST00000426763 APOC3P02656 99 aa12.35□□□□□ -0.43
RPL28-202ENST00000426763 PNLIPRP3Q17RR3 467 aa12.35□□□□□ -0.43
RPL28-202ENST00000426763 MICBQ29980 383 aa12.35□□□□□ -0.43
RPL28-202ENST00000426763 BRICD5Q6PL45 260 aa12.35□□□□□ -0.43
RPL28-202ENST00000426763 DGAT2L6Q6ZPD8 337 aa12.35□□□□□ -0.43
RPL28-202ENST00000426763 CNTNAP3BQ96NU0 1288 aa12.35□□□□□ -0.43
RPL28-202ENST00000426763 NPAP1Q9NZP6 1156 aa12.35□□□□□ -0.43
RPL28-202ENST00000426763 SERPINE3A8MV23 424 aa12.35□□□□□ -0.43
RPL28-202ENST00000426763 CA6P23280 308 aa12.35□□□□□ -0.43
RPL28-202ENST00000426763 FOXL2P58012 376 aa12.35□□□□□ -0.43
RPL28-202ENST00000426763 LSM6P62312 80 aaKnown RBP12.35□□□□□ -0.43
RPL28-202ENST00000426763 C8orf82Q6P1X6 216 aaPredicted RBP12.35□□□□□ -0.43
RPL28-202ENST00000426763 CATSPERDQ86XM0 798 aa12.35□□□□□ -0.43
RPL28-202ENST00000426763 PPP1R3CQ9UQK1 317 aa12.35□□□□□ -0.43
RPL28-202ENST00000426763 FAM96BQ9Y3D0 163 aa12.35□□□□□ -0.43
RPL28-202ENST00000426763 NKX2-8O15522 239 aa12.35□□□□□ -0.43
RPL28-202ENST00000426763 ANGPTL7O43827 346 aa12.35□□□□□ -0.43
RPL28-202ENST00000426763 AADACP22760 399 aa12.35□□□□□ -0.43
RPL28-202ENST00000426763 EVX1P49640 407 aa12.35□□□□□ -0.43
RPL28-202ENST00000426763 BORCS7Q96B45 105 aa12.35□□□□□ -0.43
RPL28-202ENST00000426763 RBMXL1Q96E39 390 aaKnown RBP12.35□□□□□ -0.43
RPL28-202ENST00000426763 MRPS24Q96EL2 167 aaKnown RBP12.35□□□□□ -0.43
RPL28-202ENST00000426763 TAS2R5Q9NYW4 299 aa12.35□□□□□ -0.43
RPL28-202ENST00000426763 SUB1P53999 127 aaKnown RBP eCLIP12.34□□□□□ -0.43
RPL28-202ENST00000426763 TAS2R30P59541 319 aa12.34□□□□□ -0.43
RPL28-202ENST00000426763 BAXQ07812 192 aa12.34□□□□□ -0.43
RPL28-202ENST00000426763 PRDX4Q13162 271 aa12.34□□□□□ -0.43
RPL28-202ENST00000426763 TMEM200AQ86VY9 491 aa12.34□□□□□ -0.43
RPL28-202ENST00000426763 PLPP2O43688 288 aa12.34□□□□□ -0.43
RPL28-202ENST00000426763 BTG1P62324 171 aa12.34□□□□□ -0.43
RPL28-202ENST00000426763 HFEQ30201 348 aa12.34□□□□□ -0.43
RPL28-202ENST00000426763 MESTQ5EB52 335 aa12.34□□□□□ -0.43
RPL28-202ENST00000426763 ZNF649Q9BS31 505 aa12.34□□□□□ -0.43
RPL28-202ENST00000426763 TRIM64CA6NLI5 447 aa12.34□□□□□ -0.43
RPL28-202ENST00000426763 CDC20Q12834 499 aa12.34□□□□□ -0.43
RPL28-202ENST00000426763 DMRTC1Q5HYR2 192 aa12.34□□□□□ -0.43
RPL28-202ENST00000426763 FAM27D1Q5T7N8 215 aa12.34□□□□□ -0.43
RPL28-202ENST00000426763 COMMD7Q86VX2 200 aa12.34□□□□□ -0.43
RPL28-202ENST00000426763 FZR1Q9UM11 496 aa12.34□□□□□ -0.43
RPL28-202ENST00000426763 TMEM30CPA0ZSE6 113 aa12.34□□□□□ -0.43
RPL28-202ENST00000426763 FFAR1O14842 300 aa12.34□□□□□ -0.43
RPL28-202ENST00000426763 BGLAPP02818 100 aa12.34□□□□□ -0.43
RPL28-202ENST00000426763 OR8U8P0C7N1 319 aa12.34□□□□□ -0.43
RPL28-202ENST00000426763 FUT3P21217 361 aa12.34□□□□□ -0.43
RPL28-202ENST00000426763 CXorf67Q86X51 503 aaPredicted RBP12.34□□□□□ -0.43
RPL28-202ENST00000426763 DERL3Q96Q80 235 aa12.34□□□□□ -0.43
RPL28-202ENST00000426763 SEC22CQ9BRL7 303 aa12.34□□□□□ -0.43
RPL28-202ENST00000426763 UQCC2Q9BRT2 126 aa12.34□□□□□ -0.43
RPL28-202ENST00000426763 RANGRFQ9HD47 186 aaPredicted RBP12.34□□□□□ -0.43
RPL28-202ENST00000426763 KCNIP2Q9NS61 270 aa12.34□□□□□ -0.43
RPL28-202ENST00000426763 CST2P09228 141 aa12.34□□□□□ -0.43
RPL28-202ENST00000426763 PATE4P0C8F1 98 aa12.34□□□□□ -0.43
RPL28-202ENST00000426763 OR5H8P0DN80 308 aa12.34□□□□□ -0.43
RPL28-202ENST00000426763 GALP22466 123 aa12.34□□□□□ -0.43
RPL28-202ENST00000426763 MPGP29372 298 aa12.34□□□□□ -0.43
RPL28-202ENST00000426763 SELENOPP49908 381 aa12.34□□□□□ -0.43
RPL28-202ENST00000426763 RBMS3Q6XE24 437 aaKnown RBP12.34□□□□□ -0.43
RPL28-202ENST00000426763 CMBLQ96DG6 245 aa12.34□□□□□ -0.43
RPL28-202ENST00000426763 GMPPAQ96IJ6 420 aaPredicted RBP12.34□□□□□ -0.43
RPL28-202ENST00000426763 FLVCR1Q9Y5Y0 555 aa12.34□□□□□ -0.43
RPL28-202ENST00000426763 CABIN1Q9Y6J0 2220 aa12.33□□□□□ -0.43
RPL28-202ENST00000426763 SDCBPO00560 298 aaPredicted RBP12.33□□□□□ -0.44
RPL28-202ENST00000426763 ZNF354AO60765 605 aaPredicted RBP12.33□□□□□ -0.44
RPL28-202ENST00000426763 ACP1P24666 158 aa12.33□□□□□ -0.44
RPL28-202ENST00000426763 TGFBR1P36897 503 aa12.33□□□□□ -0.44
RPL28-202ENST00000426763 AADACL4Q5VUY2 407 aa12.33□□□□□ -0.44
RPL28-202ENST00000426763 OR2W3Q7Z3T1 314 aa12.33□□□□□ -0.44
RPL28-202ENST00000426763 SUMF1Q8NBK3 374 aa12.33□□□□□ -0.44
RPL28-202ENST00000426763 OR6S1Q8NH40 331 aa12.33□□□□□ -0.44
RPL28-202ENST00000426763 LIN7CQ9NUP9 197 aaKnown RBP12.33□□□□□ -0.44
RPL28-202ENST00000426763 MPZL1O95297 269 aa12.33□□□□□ -0.44
RPL28-202ENST00000426763 FCGR2CP31995 323 aa12.33□□□□□ -0.44
RPL28-202ENST00000426763 TNFAIP6P98066 277 aaPredicted RBP12.33□□□□□ -0.44
RPL28-202ENST00000426763 ASAH1Q13510 395 aa12.33□□□□□ -0.44
RPL28-202ENST00000426763 SLC25A35Q3KQZ1 300 aa12.33□□□□□ -0.44
RPL28-202ENST00000426763 OR51A4Q8NGJ6 313 aa12.33□□□□□ -0.44
RPL28-202ENST00000426763 GALMQ96C23 342 aa12.33□□□□□ -0.44
RPL28-202ENST00000426763 RAB27BO00194 218 aa12.33□□□□□ -0.44
RPL28-202ENST00000426763 AGPAT2O15120 278 aa12.33□□□□□ -0.44
RPL28-202ENST00000426763 HYAL3O43820 417 aaPredicted RBP12.33□□□□□ -0.44
RPL28-202ENST00000426763 PRICKLE3O43900 615 aaPredicted RBP12.33□□□□□ -0.44
RPL28-202ENST00000426763 FBXO24O75426 580 aa12.33□□□□□ -0.44
RPL28-202ENST00000426763 ZFPL1O95159 310 aa12.33□□□□□ -0.44
RPL28-202ENST00000426763 SSTR2P30874 369 aa12.33□□□□□ -0.44
RPL28-202ENST00000426763 SSBP1Q04837 148 aaKnown RBP12.33□□□□□ -0.44
RPL28-202ENST00000426763 KISS1Q15726 138 aa12.33□□□□□ -0.44
RPL28-202ENST00000426763 ABHD3Q8WU67 409 aa12.33□□□□□ -0.44
RPL28-202ENST00000426763 XRCC3O43542 346 aa12.33□□□□□ -0.44
RPL28-202ENST00000426763 IFI6P09912 130 aa12.33□□□□□ -0.44
RPL28-202ENST00000426763 LIMS3P0CW19 117 aa12.33□□□□□ -0.44
RPL28-202ENST00000426763 LIMS4P0CW20 117 aa12.33□□□□□ -0.44
RPL28-202ENST00000426763 ANXA7P20073 488 aaKnown RBP12.33□□□□□ -0.44
RPL28-202ENST00000426763 FCN2Q15485 313 aa12.33□□□□□ -0.44
RPL28-202ENST00000426763 CDONQ4KMG0 1287 aa12.33□□□□□ -0.44
RPL28-202ENST00000426763 CDC20BQ86Y33 519 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms