RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 C1orf185Q5T7R7 199 aa13.17□□□□□ -0.3
ACTB-204ENST00000425660 ZBTB37Q5TC79 503 aa13.17□□□□□ -0.3
ACTB-204ENST00000425660 RNF144BQ7Z419 303 aa13.17□□□□□ -0.3
ACTB-204ENST00000425660 MDP1Q86V88 176 aa13.17□□□□□ -0.3
ACTB-204ENST00000425660 ANGPTL5Q86XS5 388 aa13.17□□□□□ -0.3
ACTB-204ENST00000425660 PAQR4Q8N4S7 273 aaPredicted RBP13.17□□□□□ -0.3
ACTB-204ENST00000425660 SPSB1Q96BD6 273 aa13.17□□□□□ -0.3
ACTB-204ENST00000425660 REPIN1Q9BWE0 567 aaKnown RBP13.17□□□□□ -0.3
ACTB-204ENST00000425660 LINC00854A0A1B0GVQ3 168 aa13.16□□□□□ -0.3
ACTB-204ENST00000425660 TMEM14DPA8MWL7 114 aa13.16□□□□□ -0.3
ACTB-204ENST00000425660 ICMTO60725 284 aa13.16□□□□□ -0.3
ACTB-204ENST00000425660 RAD51DO75771 328 aa13.16□□□□□ -0.3
ACTB-204ENST00000425660 CD3GP09693 182 aa13.16□□□□□ -0.3
ACTB-204ENST00000425660 VSIG8P0DPA2 414 aa13.16□□□□□ -0.3
ACTB-204ENST00000425660 CCL2P13500 99 aa13.16□□□□□ -0.3
ACTB-204ENST00000425660 ZNF14P17017 642 aaPredicted RBP13.16□□□□□ -0.3
ACTB-204ENST00000425660 INPP1P49441 399 aa13.16□□□□□ -0.3
ACTB-204ENST00000425660 CXADRP78310 365 aa13.16□□□□□ -0.3
ACTB-204ENST00000425660 UNC119Q13432 240 aa13.16□□□□□ -0.3
ACTB-204ENST00000425660 LINC00303Q3SY05 128 aa13.16□□□□□ -0.3
ACTB-204ENST00000425660 DUSP18Q8NEJ0 188 aa13.16□□□□□ -0.3
ACTB-204ENST00000425660 SPACA5Q96QH8 159 aa13.16□□□□□ -0.3
ACTB-204ENST00000425660 RAB22AQ9UL26 194 aa13.16□□□□□ -0.3
ACTB-204ENST00000425660 J3QW42 95 aa13.16□□□□□ -0.3
ACTB-204ENST00000425660 GMDSO60547 372 aa13.16□□□□□ -0.3
ACTB-204ENST00000425660 LYZL6O75951 148 aa13.16□□□□□ -0.3
ACTB-204ENST00000425660 KDM4BO94953 1096 aa13.16□□□□□ -0.3
ACTB-204ENST00000425660 FAM87AP0C7U9 286 aa13.16□□□□□ -0.3
ACTB-204ENST00000425660 APLNRP35414 380 aa13.16□□□□□ -0.3
ACTB-204ENST00000425660 BCAP31P51572 246 aa13.16□□□□□ -0.3
ACTB-204ENST00000425660 P2RY6Q15077 328 aa13.16□□□□□ -0.3
ACTB-204ENST00000425660 ZNF57Q68EA5 555 aaPredicted RBP13.16□□□□□ -0.3
ACTB-204ENST00000425660 AWAT2Q6E213 333 aa13.16□□□□□ -0.3
ACTB-204ENST00000425660 MZT2BQ6NZ67 158 aa13.16□□□□□ -0.3
ACTB-204ENST00000425660 OR2W3Q7Z3T1 314 aa13.16□□□□□ -0.3
ACTB-204ENST00000425660 C17orf78Q8N4C9 275 aa13.16□□□□□ -0.3
ACTB-204ENST00000425660 NAXEQ8NCW5 288 aa13.16□□□□□ -0.3
ACTB-204ENST00000425660 MS4A3Q96HJ5 214 aa13.16□□□□□ -0.3
ACTB-204ENST00000425660 NEDD4LQ96PU5 975 aa13.16□□□□□ -0.3
ACTB-204ENST00000425660 ATG5Q9H1Y0 275 aa13.16□□□□□ -0.3
ACTB-204ENST00000425660 OPA3Q9H6K4 179 aa13.16□□□□□ -0.3
ACTB-204ENST00000425660 AUNIPQ9H7T9 357 aa13.16□□□□□ -0.3
ACTB-204ENST00000425660 GHRLQ9UBU3 117 aa13.16□□□□□ -0.3
ACTB-204ENST00000425660 PROCRQ9UNN8 238 aa13.16□□□□□ -0.3
ACTB-204ENST00000425660 ORC5O43913 435 aa13.15□□□□□ -0.3
ACTB-204ENST00000425660 IL2RAP01589 272 aa13.15□□□□□ -0.3
ACTB-204ENST00000425660 UBBP0CG47 229 aa13.15□□□□□ -0.3
ACTB-204ENST00000425660 NAT2P11245 290 aa13.15□□□□□ -0.3
ACTB-204ENST00000425660 CCNOP22674 350 aa13.15□□□□□ -0.3
ACTB-204ENST00000425660 CEACAM8P31997 349 aaPredicted RBP13.15□□□□□ -0.3
ACTB-204ENST00000425660 OR3A4PP47883 348 aa13.15□□□□□ -0.3
ACTB-204ENST00000425660 UBE2NP61088 152 aaKnown RBP13.15□□□□□ -0.3
ACTB-204ENST00000425660 PMPCAQ10713 525 aa13.15□□□□□ -0.3
ACTB-204ENST00000425660 GK2Q14410 553 aaPredicted RBP13.15□□□□□ -0.3
ACTB-204ENST00000425660 CLVS2Q5SYC1 327 aa13.15□□□□□ -0.3
ACTB-204ENST00000425660 OR10K2Q6IF99 312 aa13.15□□□□□ -0.3
ACTB-204ENST00000425660 RAB12Q6IQ22 244 aa13.15□□□□□ -0.3
ACTB-204ENST00000425660 UNQ6494/PRO21346Q6UXR6 183 aa13.15□□□□□ -0.3
ACTB-204ENST00000425660 TOMM5Q8N4H5 51 aa13.15□□□□□ -0.3
ACTB-204ENST00000425660 CISD2Q8N5K1 135 aaKnown RBP13.15□□□□□ -0.3
ACTB-204ENST00000425660 SLC30A7Q8NEW0 376 aa13.15□□□□□ -0.3
ACTB-204ENST00000425660 OR52I2Q8NH67 350 aa13.15□□□□□ -0.3
ACTB-204ENST00000425660 UBASH3BQ8TF42 649 aa13.15□□□□□ -0.3
ACTB-204ENST00000425660 FCAMRQ8WWV6 532 aa13.15□□□□□ -0.3
ACTB-204ENST00000425660 PHF21AQ96BD5 680 aa13.15□□□□□ -0.3
ACTB-204ENST00000425660 TECTBQ96PL2 329 aa13.15□□□□□ -0.3
ACTB-204ENST00000425660 NUDT16L1Q9BRJ7 211 aaKnown RBP13.15□□□□□ -0.3
ACTB-204ENST00000425660 MRPS28Q9Y2Q9 187 aaKnown RBP13.15□□□□□ -0.3
ACTB-204ENST00000425660 PIEZO2Q9H5I5 2752 aa13.15□□□□□ -0.3
ACTB-204ENST00000425660 GTF3C1Q12789 2109 aa13.15□□□□□ -0.31
ACTB-204ENST00000425660 ZNF816-ZNF321PA0A0X1KG74 233 aa13.14□□□□□ -0.31
ACTB-204ENST00000425660 SLC6A1P30531 599 aa13.14□□□□□ -0.31
ACTB-204ENST00000425660 GDNFP39905 211 aa13.14□□□□□ -0.31
ACTB-204ENST00000425660 WNT5AP41221 380 aa13.14□□□□□ -0.31
ACTB-204ENST00000425660 PTGFRP43088 359 aa13.14□□□□□ -0.31
ACTB-204ENST00000425660 KIR2DL3P43628 341 aa13.14□□□□□ -0.31
ACTB-204ENST00000425660 DYRK1AQ13627 763 aa13.14□□□□□ -0.31
ACTB-204ENST00000425660 KLF9Q13886 244 aaPredicted RBP13.14□□□□□ -0.31
ACTB-204ENST00000425660 GLIPR1L1Q6UWM5 242 aa13.14□□□□□ -0.31
ACTB-204ENST00000425660 RPRMLQ8N4K4 120 aa13.14□□□□□ -0.31
ACTB-204ENST00000425660 ZNF610Q8N9Z0 462 aa13.14□□□□□ -0.31
ACTB-204ENST00000425660 PNLDC1Q8NA58 520 aaKnown RBP13.14□□□□□ -0.31
ACTB-204ENST00000425660 GCDHQ92947 438 aaPredicted RBP13.14□□□□□ -0.31
ACTB-204ENST00000425660 DSPP15924 2871 aaKnown RBP13.14□□□□□ -0.31
ACTB-204ENST00000425660 SVILO95425 2214 aa13.14□□□□□ -0.31
ACTB-204ENST00000425660 METTL21EPA6NDL7 271 aa13.13□□□□□ -0.31
ACTB-204ENST00000425660 RAB27BO00194 218 aa13.13□□□□□ -0.31
ACTB-204ENST00000425660 PFDN1O60925 122 aa13.13□□□□□ -0.31
ACTB-204ENST00000425660 SCGNO76038 276 aa13.13□□□□□ -0.31
ACTB-204ENST00000425660 NGFP01138 241 aa13.13□□□□□ -0.31
ACTB-204ENST00000425660 IGKV3-15P01624 115 aa13.13□□□□□ -0.31
ACTB-204ENST00000425660 PRKACBP22694 351 aa13.13□□□□□ -0.31
ACTB-204ENST00000425660 SRP9P49458 86 aaKnown RBP13.13□□□□□ -0.31
ACTB-204ENST00000425660 MALLQ13021 153 aa13.13□□□□□ -0.31
ACTB-204ENST00000425660 GPR176Q14439 515 aa13.13□□□□□ -0.31
ACTB-204ENST00000425660 CNN3Q15417 329 aaKnown RBP13.13□□□□□ -0.31
ACTB-204ENST00000425660 BEND4Q6ZU67 534 aa13.13□□□□□ -0.31
ACTB-204ENST00000425660 ZNF101Q8IZC7 436 aa13.13□□□□□ -0.31
ACTB-204ENST00000425660 CADM3Q8N126 398 aa13.13□□□□□ -0.31
ACTB-204ENST00000425660 KCNG3Q8TAE7 436 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms