RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 A0A1W2PQM1 296 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 MEGF11A6BM72 1044 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 S100A8P05109 93 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 EPHA8P29322 1005 aaPredicted RBP11.51□□□□□ -0.57
COL12A1-205ENST00000425443 MYBPHQ13203 477 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 VHLLQ6RSH7 139 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 ZNF584Q8IVC4 421 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 UEVLDQ8IX04 471 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 OR4K17Q8NGC6 315 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 FN3KRPQ9HA64 309 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 G6PC2Q9NQR9 355 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 RASL12Q9NYN1 266 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 MYOTQ9UBF9 498 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 B3GALT5Q9Y2C3 310 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 IGHV5-10-1A0A0J9YXX1 117 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 A0A1W2PNR3 127 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 BTBD17A6NE02 478 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 K7ESF4 209 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 F12P00748 615 aaPredicted RBP11.51□□□□□ -0.57
COL12A1-205ENST00000425443 GNB3P16520 340 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 AVPR2P30518 371 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 ACTBP60709 375 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 ACTG1P63261 375 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 Q5PR19 223 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 LYPD6Q86Y78 171 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 EIF4E3Q8N5X7 224 aaKnown RBP11.51□□□□□ -0.57
COL12A1-205ENST00000425443 BPIFCQ8NFQ6 507 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 OR52N4Q8NGI2 321 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 OR5M8Q8NGP6 311 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 POTEKPQ9BYX7 375 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 ALKBH4Q9NXW9 302 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 IGLV3-12A0A075B6K2 115 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 C13orf42A0A1B0GVH6 325 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 OR14I1A6ND48 311 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 LIPT2A6NK58 231 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 EEF1E1-BLOC1S5C9J1V9 151 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 ZNF208O43345 1280 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 CD8AP01732 235 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 MELTFP08582 738 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 HSD11B1P28845 292 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 PRAMEF20Q5VT98 475 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 UNQ6494/PRO21346Q6UXR6 183 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 ZNF101Q8IZC7 436 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 PAQR4Q8N4S7 273 aaPredicted RBP11.51□□□□□ -0.57
COL12A1-205ENST00000425443 ARRDC1Q8N5I2 433 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 ADAD2Q8NCV1 583 aaKnown RBP11.51□□□□□ -0.57
COL12A1-205ENST00000425443 OR2AJ1Q8NGZ0 328 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 NPRL2Q8WTW4 380 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 S100PBPQ96BU1 408 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 KCNK17Q96T54 332 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 CST11Q9H112 138 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 CNTD2Q9H8S5 307 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 TNFSF18Q9UNG2 199 aa11.51□□□□□ -0.57
COL12A1-205ENST00000425443 MGMTP16455 207 aa11.5□□□□□ -0.57
COL12A1-205ENST00000425443 ZP4Q12836 540 aa11.5□□□□□ -0.57
COL12A1-205ENST00000425443 PPP1R1AQ13522 171 aa11.5□□□□□ -0.57
COL12A1-205ENST00000425443 TMPPEQ6ZT21 453 aa11.5□□□□□ -0.57
COL12A1-205ENST00000425443 ADGRE4PQ86SQ3 457 aa11.5□□□□□ -0.57
COL12A1-205ENST00000425443 TRAPPC6BQ86SZ2 158 aa11.5□□□□□ -0.57
COL12A1-205ENST00000425443 PPP1R1CQ8WVI7 109 aa11.5□□□□□ -0.57
COL12A1-205ENST00000425443 C11orf40Q8WZ69 217 aa11.5□□□□□ -0.57
COL12A1-205ENST00000425443 CPNE4Q96A23 557 aaPredicted RBP11.5□□□□□ -0.57
COL12A1-205ENST00000425443 SLAMF6Q96DU3 332 aa11.5□□□□□ -0.57
COL12A1-205ENST00000425443 PRR13Q9NZ81 148 aa11.5□□□□□ -0.57
COL12A1-205ENST00000425443 WIF1Q9Y5W5 379 aa11.5□□□□□ -0.57
COL12A1-205ENST00000425443 SYT7O43581 403 aa11.5□□□□□ -0.57
COL12A1-205ENST00000425443 CD74P04233 296 aa11.5□□□□□ -0.57
COL12A1-205ENST00000425443 UBCP0CG48 685 aaKnown RBP11.5□□□□□ -0.57
COL12A1-205ENST00000425443 ZNF16P17020 682 aaPredicted RBP11.5□□□□□ -0.57
COL12A1-205ENST00000425443 CD34P28906 385 aa11.5□□□□□ -0.57
COL12A1-205ENST00000425443 UNC119Q13432 240 aa11.5□□□□□ -0.57
COL12A1-205ENST00000425443 SMCO1Q147U7 214 aa11.5□□□□□ -0.57
COL12A1-205ENST00000425443 DEGS2Q6QHC5 323 aa11.5□□□□□ -0.57
COL12A1-205ENST00000425443 FJX1Q86VR8 437 aa11.5□□□□□ -0.57
COL12A1-205ENST00000425443 CBLN2Q8IUK8 224 aa11.5□□□□□ -0.57
COL12A1-205ENST00000425443 OR5D18Q8NGL1 313 aa11.5□□□□□ -0.57
COL12A1-205ENST00000425443 ELP5Q8TE02 316 aa11.5□□□□□ -0.57
COL12A1-205ENST00000425443 MRGPRX4Q96LA9 322 aa11.5□□□□□ -0.57
COL12A1-205ENST00000425443 ZNF471Q9BX82 626 aaPredicted RBP11.5□□□□□ -0.57
COL12A1-205ENST00000425443 SELENOIQ9C0D9 397 aa11.5□□□□□ -0.57
COL12A1-205ENST00000425443 SLC17A5Q9NRA2 495 aa11.5□□□□□ -0.57
COL12A1-205ENST00000425443 ADAM10O14672 748 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 PI3P19957 117 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 MSX1P28360 303 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 RSPO4Q2I0M5 234 aaPredicted RBP11.49□□□□□ -0.57
COL12A1-205ENST00000425443 HLA-BQ31612 363 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 RNASE10Q5GAN6 216 aaKnown RBP11.49□□□□□ -0.57
COL12A1-205ENST00000425443 C11orf87Q6NUJ2 197 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 OR2W3Q7Z3T1 314 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 KCNRGQ8N5I3 272 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 ZNF383Q8NA42 475 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 OR2I1PQ8NGU4 316 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 ST7LQ8TDW4 575 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 NKX6-2Q9C056 277 aaPredicted RBP11.49□□□□□ -0.57
COL12A1-205ENST00000425443 NCOR1P1Q9H4R4 102 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 PRRC2CQ9Y520 2896 aaKnown RBP11.49□□□□□ -0.57
COL12A1-205ENST00000425443 CD37P11049 281 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 UNQ6126/PRO20091Q6UXV3 157 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 MOB3CQ70IA8 216 aa11.49□□□□□ -0.57
COL12A1-205ENST00000425443 LRRC18Q8N456 261 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms