RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 LIAT1Q6ZQX7 453 aa10.08□□□□□ -0.8
HLA-DQB3-203ENST00000425319 KCTD8Q6ZWB6 473 aa10.08□□□□□ -0.8
HLA-DQB3-203ENST00000425319 ZDHHC21Q8IVQ6 265 aa10.08□□□□□ -0.8
HLA-DQB3-203ENST00000425319 TIGD4Q8IY51 512 aa10.08□□□□□ -0.8
HLA-DQB3-203ENST00000425319 BEND2Q8NDZ0 799 aa10.08□□□□□ -0.8
HLA-DQB3-203ENST00000425319 OR10Z1Q8NGY1 313 aa10.08□□□□□ -0.8
HLA-DQB3-203ENST00000425319 MRAPQ8TCY5 172 aa10.08□□□□□ -0.8
HLA-DQB3-203ENST00000425319 SLAMF6Q96DU3 332 aa10.08□□□□□ -0.8
HLA-DQB3-203ENST00000425319 PYURFQ96I23 114 aa10.08□□□□□ -0.8
HLA-DQB3-203ENST00000425319 MAP6Q96JE9 813 aa10.08□□□□□ -0.8
HLA-DQB3-203ENST00000425319 SSX3Q99909 188 aa10.08□□□□□ -0.8
HLA-DQB3-203ENST00000425319 PAPOLGQ9BWT3 736 aaKnown RBP10.08□□□□□ -0.8
HLA-DQB3-203ENST00000425319 NPFFR1Q9GZQ6 430 aa10.08□□□□□ -0.8
HLA-DQB3-203ENST00000425319 OR10A2Q9H208 303 aa10.08□□□□□ -0.8
HLA-DQB3-203ENST00000425319 RGCCQ9H4X1 137 aa10.08□□□□□ -0.8
HLA-DQB3-203ENST00000425319 RANBP3Q9H6Z4 567 aaPredicted RBP10.08□□□□□ -0.8
HLA-DQB3-203ENST00000425319 DCAF13Q9NV06 445 aaKnown RBP10.08□□□□□ -0.8
HLA-DQB3-203ENST00000425319 HAO2Q9NYQ3 351 aa10.08□□□□□ -0.8
HLA-DQB3-203ENST00000425319 ADA2Q9NZK5 511 aa10.08□□□□□ -0.8
HLA-DQB3-203ENST00000425319 SLC25A10Q9UBX3 287 aaPredicted RBP10.08□□□□□ -0.8
HLA-DQB3-203ENST00000425319 CD300AQ9UGN4 299 aa10.08□□□□□ -0.8
HLA-DQB3-203ENST00000425319 OR6C68A6NDL8 312 aa10.07□□□□□ -0.8
HLA-DQB3-203ENST00000425319 TMEM210A6NLX4 147 aa10.07□□□□□ -0.8
HLA-DQB3-203ENST00000425319 H3BUX3 64 aa10.07□□□□□ -0.8
HLA-DQB3-203ENST00000425319 ZNF593O00488 134 aaPredicted RBP10.07□□□□□ -0.8
HLA-DQB3-203ENST00000425319 CDIPTO14735 213 aa10.07□□□□□ -0.8
HLA-DQB3-203ENST00000425319 KRT36O76013 467 aa10.07□□□□□ -0.8
HLA-DQB3-203ENST00000425319 IFNGP01579 166 aa10.07□□□□□ -0.8
HLA-DQB3-203ENST00000425319 NCK1P16333 377 aa10.07□□□□□ -0.8
HLA-DQB3-203ENST00000425319 SAA4P35542 130 aa10.07□□□□□ -0.8
HLA-DQB3-203ENST00000425319 TGM4P49221 684 aa10.07□□□□□ -0.8
HLA-DQB3-203ENST00000425319 ENTPD1P49961 510 aa10.07□□□□□ -0.8
HLA-DQB3-203ENST00000425319 NUDT2P50583 147 aa10.07□□□□□ -0.8
HLA-DQB3-203ENST00000425319 SF3A3Q12874 501 aaKnown RBP eCLIP10.07□□□□□ -0.8
HLA-DQB3-203ENST00000425319 TSPAN31Q12999 210 aa10.07□□□□□ -0.8
HLA-DQB3-203ENST00000425319 SAMD4BQ5PRF9 694 aaKnown RBP10.07□□□□□ -0.8
HLA-DQB3-203ENST00000425319 HACD2Q6Y1H2 254 aa10.07□□□□□ -0.8
HLA-DQB3-203ENST00000425319 OR4F17Q8NGA8 305 aa10.07□□□□□ -0.8
HLA-DQB3-203ENST00000425319 ZNF671Q8TAW3 534 aa10.07□□□□□ -0.8
HLA-DQB3-203ENST00000425319 REEP6Q96HR9 211 aa10.07□□□□□ -0.8
HLA-DQB3-203ENST00000425319 OR4F4Q96R69 305 aa10.07□□□□□ -0.8
HLA-DQB3-203ENST00000425319 PNRC2Q9NPJ4 139 aaKnown RBP10.07□□□□□ -0.8
HLA-DQB3-203ENST00000425319 FGFR1OP2Q9NVK5 253 aa10.07□□□□□ -0.8
HLA-DQB3-203ENST00000425319 ZNF391Q9UJN7 358 aa10.07□□□□□ -0.8
HLA-DQB3-203ENST00000425319 BAIAP2Q9UQB8 552 aa10.07□□□□□ -0.8
HLA-DQB3-203ENST00000425319 MAB21L2Q9Y586 359 aa10.07□□□□□ -0.8
HLA-DQB3-203ENST00000425319 TVP23AA6NH52 213 aa10.06□□□□□ -0.8
HLA-DQB3-203ENST00000425319 G3V4G9 280 aa10.06□□□□□ -0.8
HLA-DQB3-203ENST00000425319 FABP3P05413 133 aa10.06□□□□□ -0.8
HLA-DQB3-203ENST00000425319 OTX1P32242 354 aaPredicted RBP10.06□□□□□ -0.8
HLA-DQB3-203ENST00000425319 PYCR1P32322 319 aa10.06□□□□□ -0.8
HLA-DQB3-203ENST00000425319 GABRA2P47869 451 aa10.06□□□□□ -0.8
HLA-DQB3-203ENST00000425319 CX3CR1P49238 355 aa10.06□□□□□ -0.8
HLA-DQB3-203ENST00000425319 CAPZA1P52907 286 aa10.06□□□□□ -0.8
HLA-DQB3-203ENST00000425319 AANATQ16613 207 aa10.06□□□□□ -0.8
HLA-DQB3-203ENST00000425319 BEAN1Q3B7T3 259 aa10.06□□□□□ -0.8
HLA-DQB3-203ENST00000425319 TEX30Q5JUR7 227 aa10.06□□□□□ -0.8
HLA-DQB3-203ENST00000425319 HIST2H2BDQ6DRA6 164 aa10.06□□□□□ -0.8
HLA-DQB3-203ENST00000425319 WDR82Q6UXN9 313 aa10.06□□□□□ -0.8
HLA-DQB3-203ENST00000425319 SHFQ7M4L6 423 aa10.06□□□□□ -0.8
HLA-DQB3-203ENST00000425319 SLC16A9Q7RTY1 509 aa10.06□□□□□ -0.8
HLA-DQB3-203ENST00000425319 OR5T2Q8NGG2 359 aa10.06□□□□□ -0.8
HLA-DQB3-203ENST00000425319 C8orf46Q8TAG6 207 aa10.06□□□□□ -0.8
HLA-DQB3-203ENST00000425319 ITFG2Q969R8 447 aa10.06□□□□□ -0.8
HLA-DQB3-203ENST00000425319 SPSB4Q96A44 273 aa10.06□□□□□ -0.8
HLA-DQB3-203ENST00000425319 PGAM5Q96HS1 289 aa10.06□□□□□ -0.8
HLA-DQB3-203ENST00000425319 FN3KQ9H479 309 aa10.06□□□□□ -0.8
HLA-DQB3-203ENST00000425319 SPAG4Q9NPE6 437 aa10.06□□□□□ -0.8
HLA-DQB3-203ENST00000425319 ABCB10Q9NRK6 738 aa10.06□□□□□ -0.8
HLA-DQB3-203ENST00000425319 MRPL22Q9NWU5 206 aaKnown RBP10.06□□□□□ -0.8
HLA-DQB3-203ENST00000425319 TRBV23-1A0A0A0MS06 115 aa10.05□□□□□ -0.8
HLA-DQB3-203ENST00000425319 NME4O00746 187 aa10.05□□□□□ -0.8
HLA-DQB3-203ENST00000425319 ACOT8O14734 319 aa10.05□□□□□ -0.8
HLA-DQB3-203ENST00000425319 DIRAS1O95057 198 aa10.05□□□□□ -0.8
HLA-DQB3-203ENST00000425319 H2BFMP0C1H6 154 aa10.05□□□□□ -0.8
HLA-DQB3-203ENST00000425319 VSIG10L2P0DP72 767 aa10.05□□□□□ -0.8
HLA-DQB3-203ENST00000425319 SLC2A1P11166 492 aa10.05□□□□□ -0.8
HLA-DQB3-203ENST00000425319 GLRA1P23415 457 aa10.05□□□□□ -0.8
HLA-DQB3-203ENST00000425319 CAV3P56539 151 aa10.05□□□□□ -0.8
HLA-DQB3-203ENST00000425319 FXYD6P3P58550 94 aa10.05□□□□□ -0.8
HLA-DQB3-203ENST00000425319 GMFBP60983 142 aa10.05□□□□□ -0.8
HLA-DQB3-203ENST00000425319 PSME3P61289 254 aa10.05□□□□□ -0.8
HLA-DQB3-203ENST00000425319 FAM3AP98173 230 aa10.05□□□□□ -0.8
HLA-DQB3-203ENST00000425319 EIF2B1Q14232 305 aaKnown RBP10.05□□□□□ -0.8
HLA-DQB3-203ENST00000425319 SEC23BQ15437 767 aa10.05□□□□□ -0.8
HLA-DQB3-203ENST00000425319 LY6EQ16553 131 aa10.05□□□□□ -0.8
HLA-DQB3-203ENST00000425319 LRRC75BQ2VPJ9 315 aa10.05□□□□□ -0.8
HLA-DQB3-203ENST00000425319 FAM216BQ8N7L0 139 aa10.05□□□□□ -0.8
HLA-DQB3-203ENST00000425319 DUS3LQ96G46 650 aaKnown RBP10.05□□□□□ -0.8
HLA-DQB3-203ENST00000425319 RNF170Q96K19 258 aa10.05□□□□□ -0.8
HLA-DQB3-203ENST00000425319 C7orf34Q96L11 122 aa10.05□□□□□ -0.8
HLA-DQB3-203ENST00000425319 DHRS1Q96LJ7 313 aa10.05□□□□□ -0.8
HLA-DQB3-203ENST00000425319 NKX3-1Q99801 234 aaPredicted RBP10.05□□□□□ -0.8
HLA-DQB3-203ENST00000425319 MEGF9Q9H1U4 602 aa10.05□□□□□ -0.8
HLA-DQB3-203ENST00000425319 GORASP2Q9H8Y8 452 aa10.05□□□□□ -0.8
HLA-DQB3-203ENST00000425319 IL1RAPQ9NPH3 570 aa10.05□□□□□ -0.8
HLA-DQB3-203ENST00000425319 NECAP2Q9NVZ3 263 aa10.05□□□□□ -0.8
HLA-DQB3-203ENST00000425319 MAGEL2Q9UJ55 1249 aa10.05□□□□□ -0.8
HLA-DQB3-203ENST00000425319 PITPNC1Q9UKF7 332 aa10.05□□□□□ -0.8
HLA-DQB3-203ENST00000425319 ANGPTL7O43827 346 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms