RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 ALG5Q9Y673 324 aa23■■□□□ 1.27
LDB1-202ENST00000425280 OR14I1A6ND48 311 aa22.99■■□□□ 1.27
LDB1-202ENST00000425280 WIPF3A6NGB9 483 aa22.99■■□□□ 1.27
LDB1-202ENST00000425280 CCNOP22674 350 aa22.99■■□□□ 1.27
LDB1-202ENST00000425280 OLFML2AQ68BL7 652 aa22.99■■□□□ 1.27
LDB1-202ENST00000425280 DPPA2Q7Z7J5 298 aa22.99■■□□□ 1.27
LDB1-202ENST00000425280 ZNF584Q8IVC4 421 aa22.99■■□□□ 1.27
LDB1-202ENST00000425280 PNLDC1Q8NA58 520 aaKnown RBP22.99■■□□□ 1.27
LDB1-202ENST00000425280 TMEM104Q8NE00 496 aa22.99■■□□□ 1.27
LDB1-202ENST00000425280 UBASH3BQ8TF42 649 aa22.99■■□□□ 1.27
LDB1-202ENST00000425280 RNF170Q96K19 258 aa22.99■■□□□ 1.27
LDB1-202ENST00000425280 NUDT15Q9NV35 164 aa22.99■■□□□ 1.27
LDB1-202ENST00000425280 COPZ2Q9P299 210 aa22.99■■□□□ 1.27
LDB1-202ENST00000425280 NUBP2Q9Y5Y2 271 aa22.99■■□□□ 1.27
LDB1-202ENST00000425280 DOCK7Q96N67 2140 aa22.99■■□□□ 1.27
LDB1-202ENST00000425280 AHRRA9YTQ3 701 aa22.99■■□□□ 1.27
LDB1-202ENST00000425280 RAB25P57735 213 aa22.99■■□□□ 1.27
LDB1-202ENST00000425280 BTG1P62324 171 aa22.99■■□□□ 1.27
LDB1-202ENST00000425280 PLEKHN1Q494U1 663 aaPredicted RBP22.99■■□□□ 1.27
LDB1-202ENST00000425280 POM121L2Q96KW2 1035 aa22.99■■□□□ 1.27
LDB1-202ENST00000425280 NAP1L6A6NFF2 107 aa22.98■■□□□ 1.27
LDB1-202ENST00000425280 MKRN2OSH3BPM6 223 aa22.98■■□□□ 1.27
LDB1-202ENST00000425280 PTGFRP43088 359 aa22.98■■□□□ 1.27
LDB1-202ENST00000425280 PLP2Q04941 152 aa22.98■■□□□ 1.27
LDB1-202ENST00000425280 OR8B8Q15620 311 aa22.98■■□□□ 1.27
LDB1-202ENST00000425280 PCGF3Q3KNV8 242 aa22.98■■□□□ 1.27
LDB1-202ENST00000425280 TBRG1Q3YBR2 411 aa22.98■■□□□ 1.27
LDB1-202ENST00000425280 TMEM42Q69YG0 159 aa22.98■■□□□ 1.27
LDB1-202ENST00000425280 RPUSD3Q6P087 351 aaKnown RBP22.98■■□□□ 1.27
LDB1-202ENST00000425280 OR5D18Q8NGL1 313 aa22.98■■□□□ 1.27
LDB1-202ENST00000425280 KCNG3Q8TAE7 436 aa22.98■■□□□ 1.27
LDB1-202ENST00000425280 SEH1LQ96EE3 360 aa22.98■■□□□ 1.27
LDB1-202ENST00000425280 ZMAT3Q9HA38 289 aaKnown RBP22.98■■□□□ 1.27
LDB1-202ENST00000425280 MYO7BQ6PIF6 2116 aa22.98■■□□□ 1.27
LDB1-202ENST00000425280 TRAV6A0A075B6T7 132 aa22.97■■□□□ 1.27
LDB1-202ENST00000425280 MEIS3P1A6NDR6 274 aa22.97■■□□□ 1.27
LDB1-202ENST00000425280 SULT1C2O00338 296 aa22.97■■□□□ 1.27
LDB1-202ENST00000425280 UBBP0CG47 229 aa22.97■■□□□ 1.27
LDB1-202ENST00000425280 EIF2S3P41091 472 aaKnown RBP22.97■■□□□ 1.27
LDB1-202ENST00000425280 KIR2DL2P43627 348 aaPredicted RBP22.97■■□□□ 1.27
LDB1-202ENST00000425280 DRAXINQ8NBI3 349 aaPredicted RBP22.97■■□□□ 1.27
LDB1-202ENST00000425280 CMBLQ96DG6 245 aa22.97■■□□□ 1.27
LDB1-202ENST00000425280 ELF5Q9UKW6 265 aaPredicted RBP22.97■■□□□ 1.27
LDB1-202ENST00000425280 MSRB2Q9Y3D2 182 aa22.97■■□□□ 1.27
LDB1-202ENST00000425280 HMX3A6NHT5 357 aa22.97■■□□□ 1.27
LDB1-202ENST00000425280 CDC14BO60729 498 aa22.97■■□□□ 1.27
LDB1-202ENST00000425280 NAT2P11245 290 aa22.97■■□□□ 1.27
LDB1-202ENST00000425280 IGHV1-2P23083 117 aa22.97■■□□□ 1.27
LDB1-202ENST00000425280 HLA-DMAP28067 261 aa22.97■■□□□ 1.27
LDB1-202ENST00000425280 ALDH3B1P43353 468 aa22.97■■□□□ 1.27
LDB1-202ENST00000425280 GSG1Q2KHT4 349 aa22.97■■□□□ 1.27
LDB1-202ENST00000425280 SFRP4Q6FHJ7 346 aaPredicted RBP22.97■■□□□ 1.27
LDB1-202ENST00000425280 ZNF585AQ6P3V2 769 aa22.97■■□□□ 1.27
LDB1-202ENST00000425280 C1QL2Q7Z5L3 287 aa22.97■■□□□ 1.27
LDB1-202ENST00000425280 CNEP1R1Q8N9A8 125 aa22.97■■□□□ 1.27
LDB1-202ENST00000425280 NANOS1Q8WY41 292 aaKnown RBP22.97■■□□□ 1.27
LDB1-202ENST00000425280 LPAR5Q9H1C0 372 aa22.97■■□□□ 1.27
LDB1-202ENST00000425280 SCPEP1Q9HB40 452 aa22.97■■□□□ 1.27
LDB1-202ENST00000425280 APC2O95996 2303 aa22.96■■□□□ 1.27
LDB1-202ENST00000425280 CCNKO75909 580 aa22.96■■□□□ 1.27
LDB1-202ENST00000425280 MPIG6BO95866 241 aa22.96■■□□□ 1.27
LDB1-202ENST00000425280 LPLP06858 475 aa22.96■■□□□ 1.27
LDB1-202ENST00000425280 VEGFCP49767 419 aa22.96■■□□□ 1.27
LDB1-202ENST00000425280 ZNF260Q3ZCT1 412 aa22.96■■□□□ 1.27
LDB1-202ENST00000425280 CLVS2Q5SYC1 327 aa22.96■■□□□ 1.27
LDB1-202ENST00000425280 AQP3Q92482 292 aa22.96■■□□□ 1.27
LDB1-202ENST00000425280 SPSB1Q96BD6 273 aa22.96■■□□□ 1.27
LDB1-202ENST00000425280 BANF2Q9H503 90 aa22.96■■□□□ 1.27
LDB1-202ENST00000425280 TAS2R8Q9NYW2 309 aa22.96■■□□□ 1.27
LDB1-202ENST00000425280 LUZP4Q9P127 313 aa22.96■■□□□ 1.27
LDB1-202ENST00000425280 DKK4Q9UBT3 224 aa22.96■■□□□ 1.27
LDB1-202ENST00000425280 A0A1W2PP11 408 aa22.96■■□□□ 1.27
LDB1-202ENST00000425280 CSF1P09603 554 aa22.96■■□□□ 1.27
LDB1-202ENST00000425280 SDHBP21912 280 aa22.96■■□□□ 1.27
LDB1-202ENST00000425280 SSBP1Q04837 148 aaKnown RBP22.96■■□□□ 1.27
LDB1-202ENST00000425280 FAAP20Q6NZ36 180 aa22.96■■□□□ 1.27
LDB1-202ENST00000425280 BTN2A1Q7KYR7 527 aa22.96■■□□□ 1.27
LDB1-202ENST00000425280 MDP1Q86V88 176 aa22.96■■□□□ 1.27
LDB1-202ENST00000425280 TNFAIP8L1Q8WVP5 186 aa22.96■■□□□ 1.27
LDB1-202ENST00000425280 NICN1Q9BSH3 213 aa22.96■■□□□ 1.27
LDB1-202ENST00000425280 PRRC2CQ9Y520 2896 aaKnown RBP22.96■■□□□ 1.27
LDB1-202ENST00000425280 A0A0A6YYD4 124 aa22.95■■□□□ 1.26
LDB1-202ENST00000425280 TMEM235A6NFC5 223 aa22.95■■□□□ 1.26
LDB1-202ENST00000425280 SCGNO76038 276 aa22.95■■□□□ 1.26
LDB1-202ENST00000425280 TRAPPC2P0DI81 140 aa22.95■■□□□ 1.26
LDB1-202ENST00000425280 TRAPPC2BP0DI82 140 aa22.95■■□□□ 1.26
LDB1-202ENST00000425280 CNN3Q15417 329 aaKnown RBP22.95■■□□□ 1.26
LDB1-202ENST00000425280 SLC22A6Q4U2R8 563 aa22.95■■□□□ 1.26
LDB1-202ENST00000425280 NSUN5P2Q63ZY6 315 aa22.95■■□□□ 1.26
LDB1-202ENST00000425280 VWA1Q6PCB0 445 aa22.95■■□□□ 1.26
LDB1-202ENST00000425280 APOBEC3DQ96AK3 386 aaPredicted RBP22.95■■□□□ 1.26
LDB1-202ENST00000425280 MS4A3Q96HJ5 214 aa22.95■■□□□ 1.26
LDB1-202ENST00000425280 NUDT16L1Q9BRJ7 211 aaKnown RBP22.95■■□□□ 1.26
LDB1-202ENST00000425280 GHRLQ9UBU3 117 aa22.95■■□□□ 1.26
LDB1-202ENST00000425280 ING4Q9UNL4 249 aa22.95■■□□□ 1.26
LDB1-202ENST00000425280 LAMA5O15230 3695 aa22.95■■□□□ 1.26
LDB1-202ENST00000425280 SPENQ96T58 3664 aaKnown RBP22.95■■□□□ 1.26
LDB1-202ENST00000425280 CRTAPO75718 401 aaPredicted RBP22.94■■□□□ 1.26
LDB1-202ENST00000425280 NRASP01111 189 aa22.94■■□□□ 1.26
LDB1-202ENST00000425280 OR2A2Q6IF42 318 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms