RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 ALDH3B1P43353 468 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 CCL18P55774 89 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 CCL8P80075 99 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 FZD5Q13467 585 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 DCST2Q5T1A1 773 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 HES5Q5TA89 166 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 ZNF546Q86UE3 836 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 TMEM256Q8N2U0 113 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 KLHDC1Q8N7A1 406 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 OR4A16Q8NH70 328 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 LRRC29Q8WV35 223 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 LIPHQ8WWY8 451 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 SLC35C1Q96A29 364 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 ZNF501Q96CX3 271 aaPredicted RBP3.11□□□□□ -1.91
TOP2A-201ENST00000423485 SLC25A33Q9BSK2 321 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 MND1Q9BWT6 205 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 IFT22Q9H7X7 185 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 ACKR4Q9NPB9 350 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 NUP210LQ5VU65 1888 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 PI4KAP42356 2102 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 TPRP12270 2363 aaKnown RBP3.11□□□□□ -1.91
TOP2A-201ENST00000423485 OR2M5A3KFT3 312 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 NUPR2A6NF83 97 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 F12P00748 615 aaPredicted RBP3.11□□□□□ -1.91
TOP2A-201ENST00000423485 GBX2P52951 348 aaPredicted RBP3.11□□□□□ -1.91
TOP2A-201ENST00000423485 MTCP1P56278 107 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 GAB4Q2WGN9 574 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 IFI44LQ53G44 452 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 SFRP4Q6FHJ7 346 aaPredicted RBP3.11□□□□□ -1.91
TOP2A-201ENST00000423485 PYHIN1Q6K0P9 492 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 FAM198BQ6UWH4 519 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 NPNTQ6UXI9 565 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 KRT74Q7RTS7 529 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 ZSWIM9Q86XI8 627 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 PLPP7Q8NBV4 271 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 DOK4Q8TEW6 326 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 SCMH1Q96GD3 660 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 TMEM19Q96HH6 336 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 P2RX4Q99571 388 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 MCHR1Q99705 422 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 RHOJQ9H4E5 214 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 REEP4Q9H6H4 257 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 METTL8Q9H825 291 aaKnown RBP3.11□□□□□ -1.91
TOP2A-201ENST00000423485 ASCL3Q9NQ33 180 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 MBNL3Q9NUK0 354 aaKnown RBP3.11□□□□□ -1.91
TOP2A-201ENST00000423485 SLC25A10Q9UBX3 287 aaPredicted RBP3.11□□□□□ -1.91
TOP2A-201ENST00000423485 DAPK2Q9UIK4 370 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 MYRFQ9Y2G1 1151 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 TIMM22Q9Y584 194 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 EXPH5Q8NEV8 1989 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 FLNBO75369 2602 aaKnown RBP3.11□□□□□ -1.91
TOP2A-201ENST00000423485 SPG11Q96JI7 2443 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 H3BMQ9 156 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 MYF6P23409 242 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 HTR1DP28221 377 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 ARF6P62330 175 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 FLI1Q01543 452 aaPredicted RBP3.11□□□□□ -1.91
TOP2A-201ENST00000423485 GPNMBQ14956 572 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 QPRTQ15274 297 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 ZNF672Q499Z4 452 aaPredicted RBP3.11□□□□□ -1.91
TOP2A-201ENST00000423485 PRR30Q53SZ7 412 aaPredicted RBP3.11□□□□□ -1.91
TOP2A-201ENST00000423485 TOR2AQ5JU69 321 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 FAM74A1Q5RGS3 127 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 PEAR1Q5VY43 1037 aaPredicted RBP3.11□□□□□ -1.91
TOP2A-201ENST00000423485 ZNF600Q6ZNG1 722 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 TSEN54Q7Z6J9 526 aaKnown RBP3.11□□□□□ -1.91
TOP2A-201ENST00000423485 TMEM135Q86UB9 458 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 MOGAT3Q86VF5 341 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 C1QL4Q86Z23 238 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 ODF3L1Q8IXM7 274 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 Q8IYB0 196 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 TCTE3Q8IZS6 198 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 ADAD2Q8NCV1 583 aaKnown RBP3.11□□□□□ -1.91
TOP2A-201ENST00000423485 GPR26Q8NDV2 337 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 PTP4A1Q93096 173 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 IL22RA2Q969J5 263 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 GATA5Q9BWX5 397 aaPredicted RBP3.11□□□□□ -1.91
TOP2A-201ENST00000423485 ABCD2Q9UBJ2 740 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 EXO1Q9UQ84 846 aaKnown RBP3.11□□□□□ -1.91
TOP2A-201ENST00000423485 ICE1Q9Y2F5 2266 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 TMEM238LA0A1B0GVL6 79 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 SERINC4A6NH21 518 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 C3orf84H3BNL1 204 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 J3QR06 171 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 ATP6V1B2P21281 511 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 TAGLN2P37802 199 aaKnown RBP3.11□□□□□ -1.91
TOP2A-201ENST00000423485 NPBWR2P48146 333 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 HOXA1P49639 335 aaPredicted RBP3.11□□□□□ -1.91
TOP2A-201ENST00000423485 SNRPD3P62318 126 aaKnown RBP3.11□□□□□ -1.91
TOP2A-201ENST00000423485 GRB2P62993 217 aaKnown RBP3.11□□□□□ -1.91
TOP2A-201ENST00000423485 PRKCDQ05655 676 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 CRYZQ08257 329 aaKnown RBP3.11□□□□□ -1.91
TOP2A-201ENST00000423485 CD300CQ08708 224 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 BNIP2Q12982 314 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 SMN1Q16637 294 aaKnown RBP3.11□□□□□ -1.91
TOP2A-201ENST00000423485 PAN3Q58A45 887 aaKnown RBP3.11□□□□□ -1.91
TOP2A-201ENST00000423485 RNF165Q6ZSG1 346 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 OR10G3Q8NGC4 313 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 FNDC9Q8TBE3 224 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 NPRL2Q8WTW4 380 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms