RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 SLC22A4Q9H015 551 aa12.67□□□□□ -0.38
USB1-202ENST00000423271 RNPEPL1Q9HAU8 725 aa12.67□□□□□ -0.38
USB1-202ENST00000423271 C8orf4Q9NR00 106 aa12.67□□□□□ -0.38
USB1-202ENST00000423271 MRPL15Q9P015 296 aaKnown RBP12.67□□□□□ -0.38
USB1-202ENST00000423271 AASSQ9UDR5 926 aa12.67□□□□□ -0.38
USB1-202ENST00000423271 KLHDC2Q9Y2U9 406 aa12.67□□□□□ -0.38
USB1-202ENST00000423271 TMEM89A2RUT3 159 aa12.66□□□□□ -0.38
USB1-202ENST00000423271 SLC22A31A6NKX4 558 aa12.66□□□□□ -0.38
USB1-202ENST00000423271 TBX1O43435 398 aa12.66□□□□□ -0.38
USB1-202ENST00000423271 GMDSO60547 372 aa12.66□□□□□ -0.38
USB1-202ENST00000423271 ANXA2P07355 339 aaKnown RBP12.66□□□□□ -0.38
USB1-202ENST00000423271 IGHV4-38-2P0DP08 117 aa12.66□□□□□ -0.38
USB1-202ENST00000423271 CFPP27918 469 aa12.66□□□□□ -0.38
USB1-202ENST00000423271 HCCSP53701 268 aa12.66□□□□□ -0.38
USB1-202ENST00000423271 UBA52P62987 128 aaKnown RBP12.66□□□□□ -0.38
USB1-202ENST00000423271 GRB2P62993 217 aaKnown RBP12.66□□□□□ -0.38
USB1-202ENST00000423271 SFRP4Q6FHJ7 346 aaPredicted RBP12.66□□□□□ -0.38
USB1-202ENST00000423271 DCDC5Q6ZRR9 648 aa12.66□□□□□ -0.38
USB1-202ENST00000423271 ZNF826PQ6ZT77 177 aa12.66□□□□□ -0.38
USB1-202ENST00000423271 NLRC3Q7RTR2 1065 aa12.66□□□□□ -0.38
USB1-202ENST00000423271 SLC16A9Q7RTY1 509 aa12.66□□□□□ -0.38
USB1-202ENST00000423271 BOLLQ8N9W6 283 aaKnown RBP12.66□□□□□ -0.38
USB1-202ENST00000423271 OTOSQ8NHW6 89 aa12.66□□□□□ -0.38
USB1-202ENST00000423271 THEM6Q8WUY1 208 aa12.66□□□□□ -0.38
USB1-202ENST00000423271 RNF133Q8WVZ7 376 aa12.66□□□□□ -0.38
USB1-202ENST00000423271 TRUB1Q8WWH5 349 aaKnown RBP12.66□□□□□ -0.38
USB1-202ENST00000423271 RAB40AQ8WXH6 277 aa12.66□□□□□ -0.38
USB1-202ENST00000423271 GCDHQ92947 438 aaPredicted RBP12.66□□□□□ -0.38
USB1-202ENST00000423271 SPSB4Q96A44 273 aa12.66□□□□□ -0.38
USB1-202ENST00000423271 ZNF48Q96MX3 618 aaPredicted RBP12.66□□□□□ -0.38
USB1-202ENST00000423271 DUX5Q96PT3 197 aa12.66□□□□□ -0.38
USB1-202ENST00000423271 CNN2Q99439 309 aaKnown RBP12.66□□□□□ -0.38
USB1-202ENST00000423271 FN3KRPQ9HA64 309 aa12.66□□□□□ -0.38
USB1-202ENST00000423271 RNF7Q9UBF6 113 aa12.66□□□□□ -0.38
USB1-202ENST00000423271 CTSZQ9UBR2 303 aa12.66□□□□□ -0.38
USB1-202ENST00000423271 NOP16Q9Y3C1 178 aaKnown RBP12.66□□□□□ -0.38
USB1-202ENST00000423271 SOX21Q9Y651 276 aaPredicted RBP12.66□□□□□ -0.38
USB1-202ENST00000423271 C22orf46C9J442 243 aa12.65□□□□□ -0.38
USB1-202ENST00000423271 C3orf80F5H4A9 247 aa12.65□□□□□ -0.38
USB1-202ENST00000423271 SLC16A6O15403 523 aa12.65□□□□□ -0.38
USB1-202ENST00000423271 XRCC2O43543 280 aa12.65□□□□□ -0.38
USB1-202ENST00000423271 ENTPD6O75354 484 aa12.65□□□□□ -0.38
USB1-202ENST00000423271 CPT2P23786 658 aa12.65□□□□□ -0.38
USB1-202ENST00000423271 HSD11B1P28845 292 aa12.65□□□□□ -0.38
USB1-202ENST00000423271 HTR1FP30939 366 aa12.65□□□□□ -0.38
USB1-202ENST00000423271 COMPP49747 757 aaPredicted RBP12.65□□□□□ -0.38
USB1-202ENST00000423271 SNRPGP62308 76 aaKnown RBP12.65□□□□□ -0.38
USB1-202ENST00000423271 WDR25Q64LD2 544 aaPredicted RBP12.65□□□□□ -0.38
USB1-202ENST00000423271 BTNL3Q6UXE8 466 aa12.65□□□□□ -0.38
USB1-202ENST00000423271 ZNF841Q6ZN19 808 aa12.65□□□□□ -0.38
USB1-202ENST00000423271 FAM57BQ71RH2 274 aa12.65□□□□□ -0.38
USB1-202ENST00000423271 DOK3Q7L591 496 aa12.65□□□□□ -0.38
USB1-202ENST00000423271 PRSS45Q7RTY3 260 aa12.65□□□□□ -0.38
USB1-202ENST00000423271 ENTHD1Q8IYW4 607 aa12.65□□□□□ -0.38
USB1-202ENST00000423271 ZNF454Q8N9F8 522 aa12.65□□□□□ -0.38
USB1-202ENST00000423271 ZNF555Q8NEP9 628 aa12.65□□□□□ -0.38
USB1-202ENST00000423271 NRG4Q8WWG1 115 aa12.65□□□□□ -0.38
USB1-202ENST00000423271 C1orf147Q96MC9 270 aaPredicted RBP12.65□□□□□ -0.38
USB1-202ENST00000423271 YIPF3Q9GZM5 350 aa12.65□□□□□ -0.38
USB1-202ENST00000423271 OPA3Q9H6K4 179 aa12.65□□□□□ -0.38
USB1-202ENST00000423271 ADGRL4Q9HBW9 690 aa12.65□□□□□ -0.38
USB1-202ENST00000423271 C1orf123Q9NWV4 160 aa12.65□□□□□ -0.38
USB1-202ENST00000423271 HAO2Q9NYQ3 351 aa12.65□□□□□ -0.38
USB1-202ENST00000423271 ZNF319Q9P2F9 582 aa12.65□□□□□ -0.38
USB1-202ENST00000423271 CLN8Q9UBY8 286 aa12.65□□□□□ -0.38
USB1-202ENST00000423271 WARS2Q9UGM6 360 aaKnown RBP12.65□□□□□ -0.38
USB1-202ENST00000423271 COPS3Q9UNS2 423 aa12.65□□□□□ -0.38
USB1-202ENST00000423271 TRAV40A0A0B4J280 105 aa12.64□□□□□ -0.39
USB1-202ENST00000423271 A6NLC8 198 aa12.64□□□□□ -0.39
USB1-202ENST00000423271 LGALS8O00214 317 aa12.64□□□□□ -0.39
USB1-202ENST00000423271 GRPP07492 148 aa12.64□□□□□ -0.39
USB1-202ENST00000423271 LYNP07948 512 aa12.64□□□□□ -0.39
USB1-202ENST00000423271 GABRB1P18505 474 aa12.64□□□□□ -0.39
USB1-202ENST00000423271 ALOX5APP20292 161 aa12.64□□□□□ -0.39
USB1-202ENST00000423271 PSMB10P40306 273 aa12.64□□□□□ -0.39
USB1-202ENST00000423271 OPRL1P41146 370 aa12.64□□□□□ -0.39
USB1-202ENST00000423271 SLC15A1P46059 708 aa12.64□□□□□ -0.39
USB1-202ENST00000423271 ZNF121P58317 390 aaPredicted RBP12.64□□□□□ -0.39
USB1-202ENST00000423271 FAM3AP98173 230 aa12.64□□□□□ -0.39
USB1-202ENST00000423271 OCLNQ16625 522 aa12.64□□□□□ -0.39
USB1-202ENST00000423271 TIGD6Q17RP2 521 aa12.64□□□□□ -0.39
USB1-202ENST00000423271 GFOD2Q3B7J2 385 aa12.64□□□□□ -0.39
USB1-202ENST00000423271 SLC25A30Q5SVS4 291 aa12.64□□□□□ -0.39
USB1-202ENST00000423271 LRRN1Q6UXK5 716 aa12.64□□□□□ -0.39
USB1-202ENST00000423271 WDR86Q86TI4 376 aa12.64□□□□□ -0.39
USB1-202ENST00000423271 PIP4P2Q8N4L2 257 aa12.64□□□□□ -0.39
USB1-202ENST00000423271 OR51G2Q8NGK0 314 aa12.64□□□□□ -0.39
USB1-202ENST00000423271 CYGBQ8WWM9 190 aa12.64□□□□□ -0.39
USB1-202ENST00000423271 SGK3Q96BR1 496 aa12.64□□□□□ -0.39
USB1-202ENST00000423271 UPRTQ96BW1 309 aa12.64□□□□□ -0.39
USB1-202ENST00000423271 REEP6Q96HR9 211 aa12.64□□□□□ -0.39
USB1-202ENST00000423271 NUDT16L1Q9BRJ7 211 aaKnown RBP12.64□□□□□ -0.39
USB1-202ENST00000423271 PPP1R3EQ9H7J1 279 aa12.64□□□□□ -0.39
USB1-202ENST00000423271 BRD7Q9NPI1 651 aa12.64□□□□□ -0.39
USB1-202ENST00000423271 LAMP5Q9UJQ1 280 aa12.64□□□□□ -0.39
USB1-202ENST00000423271 KIR2DS1A0A191URI9 304 aa12.63□□□□□ -0.39
USB1-202ENST00000423271 hCG_38984A0A1B0GV85 526 aa12.63□□□□□ -0.39
USB1-202ENST00000423271 DNAJC9-AS1A6NH13 148 aa12.63□□□□□ -0.39
USB1-202ENST00000423271 PRR32B1ATL7 298 aa12.63□□□□□ -0.39
USB1-202ENST00000423271 PHYHO14832 338 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms