RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 IL5RAQ01344 420 aa9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 GFOD2Q3B7J2 385 aa9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 WDR82Q6UXN9 313 aa9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 BTN2A1Q7KYR7 527 aa9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 SLC36A1Q7Z2H8 476 aa9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 WDR86Q86TI4 376 aa9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 TIGD4Q8IY51 512 aa9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 IQCF1Q8N6M8 205 aa9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 ZNF454Q8N9F8 522 aa9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 OR1M1Q8NGA1 313 aa9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 GIPC3Q8TF64 312 aa9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 ST8SIA4Q92187 359 aa9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 OTULINQ96BN8 352 aa9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 SGK3Q96BR1 496 aa9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 CCDC124Q96CT7 223 aaKnown RBP9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 NSL1Q96IY1 281 aa9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 MICU1Q9BPX6 476 aa9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 SIRPDQ9H106 197 aa9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 TLNRD1Q9H1K6 362 aa9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 DNAJC27Q9NZQ0 273 aa9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 KPTNQ9Y664 436 aa9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 IGHV3OR15-7A0A075B7D8 119 aa9.55□□□□□ -0.88
SQSTM1-203ENST00000422245 GPR37O15354 613 aa9.55□□□□□ -0.88
SQSTM1-203ENST00000422245 KNG1P01042 644 aa9.55□□□□□ -0.88
SQSTM1-203ENST00000422245 H2BFMP0C1H6 154 aa9.55□□□□□ -0.88
SQSTM1-203ENST00000422245 OMGP23515 440 aa9.55□□□□□ -0.88
SQSTM1-203ENST00000422245 CSNK2BP67870 215 aa9.55□□□□□ -0.88
SQSTM1-203ENST00000422245 MS4A2Q01362 244 aa9.55□□□□□ -0.88
SQSTM1-203ENST00000422245 CDONQ4KMG0 1287 aa9.55□□□□□ -0.88
SQSTM1-203ENST00000422245 KLHL12Q53G59 568 aa9.55□□□□□ -0.88
SQSTM1-203ENST00000422245 FIP1L1Q6UN15 594 aaKnown RBP9.55□□□□□ -0.88
SQSTM1-203ENST00000422245 C11orf53Q8IXP5 236 aa9.55□□□□□ -0.88
SQSTM1-203ENST00000422245 GALNT4Q8N4A0 578 aa9.55□□□□□ -0.88
SQSTM1-203ENST00000422245 OTOSQ8NHW6 89 aa9.55□□□□□ -0.88
SQSTM1-203ENST00000422245 WFDC12Q8WWY7 111 aa9.55□□□□□ -0.88
SQSTM1-203ENST00000422245 LHX4Q969G2 390 aa9.55□□□□□ -0.88
SQSTM1-203ENST00000422245 ITPKCQ96DU7 683 aa9.55□□□□□ -0.88
SQSTM1-203ENST00000422245 PGAM5Q96HS1 289 aa9.55□□□□□ -0.88
SQSTM1-203ENST00000422245 DMRTB1Q96MA1 342 aa9.55□□□□□ -0.88
SQSTM1-203ENST00000422245 AMELYQ99218 206 aa9.55□□□□□ -0.88
SQSTM1-203ENST00000422245 FEVQ99581 238 aa9.55□□□□□ -0.88
SQSTM1-203ENST00000422245 RTL8AQ9BWD3 113 aa9.55□□□□□ -0.88
SQSTM1-203ENST00000422245 CHID1Q9BWS9 393 aa9.55□□□□□ -0.88
SQSTM1-203ENST00000422245 CHIAQ9BZP6 476 aa9.55□□□□□ -0.88
SQSTM1-203ENST00000422245 MED20Q9H944 212 aa9.55□□□□□ -0.88
SQSTM1-203ENST00000422245 BEX1Q9HBH7 125 aa9.55□□□□□ -0.88
SQSTM1-203ENST00000422245 ACOXLQ9NUZ1 547 aa9.55□□□□□ -0.88
SQSTM1-203ENST00000422245 RPUSD1Q9UJJ7 312 aaKnown RBP9.55□□□□□ -0.88
SQSTM1-203ENST00000422245 ZNF391Q9UJN7 358 aa9.55□□□□□ -0.88
SQSTM1-203ENST00000422245 MPC1Q9Y5U8 109 aa9.55□□□□□ -0.88
SQSTM1-203ENST00000422245 A0A1B0GVI7 797 aa9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 NKX6-3A6NJ46 265 aa9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 TMEM210A6NLX4 147 aa9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 PRR23D1E9PI22 279 aaPredicted RBP9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 PRODHO43272 600 aa9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 FCN3O75636 299 aa9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 CST1P01037 141 aa9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 LYNP07948 512 aa9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 PRR23D2P0DMB1 279 aaPredicted RBP9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 PSMA6P60900 246 aaKnown RBP9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 WDR38Q5JTN6 314 aa9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 PLBD1Q6P4A8 553 aa9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 TREML4Q6UXN2 200 aa9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 C17orf107Q6ZR85 190 aa9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 LDLRAD3Q86YD5 345 aa9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 ADGRG5Q8IZF4 528 aa9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 CMTM4Q8IZR5 234 aa9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 KIR3DL3Q8N743 410 aa9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 FAM216BQ8N7L0 139 aa9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 SCCPDHQ8NBX0 429 aa9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 CCDC197Q8NCU1 140 aa9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 OR10Z1Q8NGY1 313 aa9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 TBC1D15Q8TC07 691 aa9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 DYRK2Q92630 601 aa9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 TAF15Q92804 592 aaKnown RBP eCLIP9.54□□□□□ -0.884e-7■□□□□ 10.7
SQSTM1-203ENST00000422245 CCT8L2Q96SF2 557 aa9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 CCL13Q99616 98 aa9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 OR51V1Q9H2C8 321 aa9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 RASSF4Q9H2L5 321 aa9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 NIPAL2Q9H841 368 aa9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 CNTD2Q9H8S5 307 aa9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 ZNF556Q9HAH1 456 aa9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 BRD7Q9NPI1 651 aa9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 TNFRSF19Q9NS68 423 aa9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 RHBDD3Q9Y3P4 386 aa9.54□□□□□ -0.88
SQSTM1-203ENST00000422245 A0A1B0GW55 424 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 AQP12BA6NM10 295 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 GNGT2O14610 69 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 ACOT8O14734 319 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 CDIPTO14735 213 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 NDUFB3O43676 98 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 SELENOFO60613 162 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 E2F6O75461 281 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 FAM107AO95990 144 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 CST4P01036 141 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 HMGN1P05114 100 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 DUX4L2P0CJ85 424 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 DUX4L3P0CJ86 424 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms