RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 MRPL3P09001 348 aaKnown RBP13.73□□□□□ -0.21
LINC00404-201ENST00000418660 PPIAL4GP0DN37 164 aa13.73□□□□□ -0.21
LINC00404-201ENST00000418660 EPHA2P29317 976 aa13.73□□□□□ -0.21
LINC00404-201ENST00000418660 DCTDP32321 178 aa13.73□□□□□ -0.21
LINC00404-201ENST00000418660 NPY4RP50391 375 aa13.73□□□□□ -0.21
LINC00404-201ENST00000418660 IL5RAQ01344 420 aa13.73□□□□□ -0.21
LINC00404-201ENST00000418660 ROM1Q03395 351 aa13.73□□□□□ -0.21
LINC00404-201ENST00000418660 KLF17Q5JT82 389 aaPredicted RBP13.73□□□□□ -0.21
LINC00404-201ENST00000418660 WDR86Q86TI4 376 aa13.73□□□□□ -0.21
LINC00404-201ENST00000418660 C11orf53Q8IXP5 236 aa13.73□□□□□ -0.21
LINC00404-201ENST00000418660 GALNT4Q8N4A0 578 aa13.73□□□□□ -0.21
LINC00404-201ENST00000418660 GCSAMQ8N6F7 178 aa13.73□□□□□ -0.21
LINC00404-201ENST00000418660 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.73□□□□□ -0.21
LINC00404-201ENST00000418660 TCEANCQ8N8B7 351 aa13.73□□□□□ -0.21
LINC00404-201ENST00000418660 OR1M1Q8NGA1 313 aa13.73□□□□□ -0.21
LINC00404-201ENST00000418660 OR8B12Q8NGG6 310 aa13.73□□□□□ -0.21
LINC00404-201ENST00000418660 TMEM163Q8TC26 289 aa13.73□□□□□ -0.21
LINC00404-201ENST00000418660 ASB17Q8WXJ9 295 aa13.73□□□□□ -0.21
LINC00404-201ENST00000418660 LYZL4Q96KX0 146 aa13.73□□□□□ -0.21
LINC00404-201ENST00000418660 MICU1Q9BPX6 476 aa13.73□□□□□ -0.21
LINC00404-201ENST00000418660 PAPOLGQ9BWT3 736 aaKnown RBP13.73□□□□□ -0.21
LINC00404-201ENST00000418660 MROQ9BYG7 248 aa13.73□□□□□ -0.21
LINC00404-201ENST00000418660 PPP1R3EQ9H7J1 279 aa13.73□□□□□ -0.21
LINC00404-201ENST00000418660 H2AFY2Q9P0M6 372 aaPredicted RBP13.73□□□□□ -0.21
LINC00404-201ENST00000418660 MPC1Q9Y5U8 109 aa13.73□□□□□ -0.21
LINC00404-201ENST00000418660 SLC22A31A6NKX4 558 aa13.72□□□□□ -0.21
LINC00404-201ENST00000418660 ANXA2P2A6NMY6 339 aa13.72□□□□□ -0.21
LINC00404-201ENST00000418660 PSMD9O00233 223 aa13.72□□□□□ -0.21
LINC00404-201ENST00000418660 ZNF254O75437 659 aa13.72□□□□□ -0.21
LINC00404-201ENST00000418660 CST4P01036 141 aa13.72□□□□□ -0.21
LINC00404-201ENST00000418660 ACKR3P25106 362 aa13.72□□□□□ -0.21
LINC00404-201ENST00000418660 AADACL4Q5VUY2 407 aa13.72□□□□□ -0.21
LINC00404-201ENST00000418660 NXNL2Q5VZ03 156 aa13.72□□□□□ -0.21
LINC00404-201ENST00000418660 ASRGL1Q7L266 308 aa13.72□□□□□ -0.21
LINC00404-201ENST00000418660 BCDIN3DQ7Z5W3 292 aaKnown RBP13.72□□□□□ -0.21
LINC00404-201ENST00000418660 ZNF679Q8IYX0 411 aa13.72□□□□□ -0.21
LINC00404-201ENST00000418660 C22orf15Q8WYQ4 148 aa13.72□□□□□ -0.21
LINC00404-201ENST00000418660 ITFG2Q969R8 447 aa13.72□□□□□ -0.21
LINC00404-201ENST00000418660 ITPKCQ96DU7 683 aa13.72□□□□□ -0.21
LINC00404-201ENST00000418660 CENPNQ96H22 339 aaPredicted RBP13.72□□□□□ -0.21
LINC00404-201ENST00000418660 OR8B4Q96RC9 309 aa13.72□□□□□ -0.21
LINC00404-201ENST00000418660 CNN2Q99439 309 aaKnown RBP13.72□□□□□ -0.21
LINC00404-201ENST00000418660 CIB1Q99828 191 aa13.72□□□□□ -0.21
LINC00404-201ENST00000418660 NUDT16L1Q9BRJ7 211 aaKnown RBP13.72□□□□□ -0.21
LINC00404-201ENST00000418660 ABCB9Q9NP78 766 aa13.72□□□□□ -0.21
LINC00404-201ENST00000418660 FAM206AQ9NX38 181 aa13.72□□□□□ -0.21
LINC00404-201ENST00000418660 ERVK-18Q9QC07 812 aa13.72□□□□□ -0.21
LINC00404-201ENST00000418660 A0A0U1RQV5 110 aa13.71□□□□□ -0.21
LINC00404-201ENST00000418660 TMEM269A0A1B0GVZ9 245 aa13.71□□□□□ -0.21
LINC00404-201ENST00000418660 TRIM77I1YAP6 450 aa13.71□□□□□ -0.21
LINC00404-201ENST00000418660 M0R129 80 aa13.71□□□□□ -0.21
LINC00404-201ENST00000418660 ADAM20O43506 726 aa13.71□□□□□ -0.21
LINC00404-201ENST00000418660 PRDX4Q13162 271 aa13.71□□□□□ -0.21
LINC00404-201ENST00000418660 TUSC1Q2TAM9 212 aa13.71□□□□□ -0.21
LINC00404-201ENST00000418660 TEX36Q5VZQ5 186 aa13.71□□□□□ -0.21
LINC00404-201ENST00000418660 CD276Q5ZPR3 534 aa13.71□□□□□ -0.21
LINC00404-201ENST00000418660 WDR82Q6UXN9 313 aa13.71□□□□□ -0.21
LINC00404-201ENST00000418660 LRRC29Q8WV35 223 aa13.71□□□□□ -0.21
LINC00404-201ENST00000418660 UPRTQ96BW1 309 aa13.71□□□□□ -0.21
LINC00404-201ENST00000418660 MNTQ99583 582 aa13.71□□□□□ -0.21
LINC00404-201ENST00000418660 RTL8AQ9BWD3 113 aa13.71□□□□□ -0.21
LINC00404-201ENST00000418660 TLNRD1Q9H1K6 362 aa13.71□□□□□ -0.21
LINC00404-201ENST00000418660 SEMA6AQ9H2E6 1030 aa13.71□□□□□ -0.21
LINC00404-201ENST00000418660 HAO2Q9NYQ3 351 aa13.71□□□□□ -0.21
LINC00404-201ENST00000418660 CTSZQ9UBR2 303 aa13.71□□□□□ -0.21
LINC00404-201ENST00000418660 ZNF69Q9UC07 566 aa13.71□□□□□ -0.21
LINC00404-201ENST00000418660 COPS3Q9UNS2 423 aa13.71□□□□□ -0.21
LINC00404-201ENST00000418660 WNK2Q9Y3S1 2297 aa13.7□□□□□ -0.22
LINC00404-201ENST00000418660 ZNF850A8MQ14 1090 aa13.7□□□□□ -0.22
LINC00404-201ENST00000418660 PRR32B1ATL7 298 aa13.7□□□□□ -0.22
LINC00404-201ENST00000418660 GYPAP02724 150 aa13.7□□□□□ -0.22
LINC00404-201ENST00000418660 EGR1P18146 543 aa13.7□□□□□ -0.22
LINC00404-201ENST00000418660 CFHR2P36980 270 aa13.7□□□□□ -0.22
LINC00404-201ENST00000418660 MAP2K3P46734 347 aa13.7□□□□□ -0.22
LINC00404-201ENST00000418660 RIDAP52758 137 aaKnown RBP13.7□□□□□ -0.22
LINC00404-201ENST00000418660 CSNK2BP67870 215 aa13.7□□□□□ -0.22
LINC00404-201ENST00000418660 KRT74Q7RTS7 529 aa13.7□□□□□ -0.22
LINC00404-201ENST00000418660 FAM90A1Q86YD7 464 aa13.7□□□□□ -0.22
LINC00404-201ENST00000418660 GID4Q8IVV7 300 aa13.7□□□□□ -0.22
LINC00404-201ENST00000418660 FAM216AQ8WUB2 273 aa13.7□□□□□ -0.22
LINC00404-201ENST00000418660 OR5P3Q8WZ94 311 aa13.7□□□□□ -0.22
LINC00404-201ENST00000418660 PIGCQ92535 297 aa13.7□□□□□ -0.22
LINC00404-201ENST00000418660 TECTBQ96PL2 329 aa13.7□□□□□ -0.22
LINC00404-201ENST00000418660 IL4I1Q96RQ9 567 aa13.7□□□□□ -0.22
LINC00404-201ENST00000418660 OSBPL10Q9BXB5 764 aa13.7□□□□□ -0.22
LINC00404-201ENST00000418660 PBOV1Q9GZY1 135 aa13.7□□□□□ -0.22
LINC00404-201ENST00000418660 ADGRL4Q9HBW9 690 aa13.7□□□□□ -0.22
LINC00404-201ENST00000418660 IKZF2Q9UKS7 526 aa13.7□□□□□ -0.22
LINC00404-201ENST00000418660 OAZ3Q9UMX2 235 aa13.7□□□□□ -0.22
LINC00404-201ENST00000418660 TMEM210A6NLX4 147 aa13.69□□□□□ -0.22
LINC00404-201ENST00000418660 C22orf46C9J442 243 aa13.69□□□□□ -0.22
LINC00404-201ENST00000418660 CDIPTO14735 213 aa13.69□□□□□ -0.22
LINC00404-201ENST00000418660 ENSAO43768 121 aaKnown RBP13.69□□□□□ -0.22
LINC00404-201ENST00000418660 ATP6V1B1P15313 513 aa13.69□□□□□ -0.22
LINC00404-201ENST00000418660 MUC1P15941 1255 aaPredicted RBP13.69□□□□□ -0.22
LINC00404-201ENST00000418660 ACTR3P61158 418 aa13.69□□□□□ -0.22
LINC00404-201ENST00000418660 MICBQ29980 383 aa13.69□□□□□ -0.22
LINC00404-201ENST00000418660 ZNF829Q3KNS6 432 aaPredicted RBP13.69□□□□□ -0.22
LINC00404-201ENST00000418660 ZNF322Q6U7Q0 402 aaPredicted RBP13.69□□□□□ -0.22
LINC00404-201ENST00000418660 RBMS3Q6XE24 437 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms