RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 TMEM156Q8N614 296 aa11.72□□□□□ -0.53
TNFRSF8-203ENST00000417814 TMEM217Q8N7C4 229 aa11.72□□□□□ -0.53
TNFRSF8-203ENST00000417814 ZNF721Q8TF20 911 aa11.72□□□□□ -0.53
TNFRSF8-203ENST00000417814 SGK3Q96BR1 496 aa11.72□□□□□ -0.53
TNFRSF8-203ENST00000417814 RRNAD1Q96FB5 475 aaKnown RBP11.72□□□□□ -0.53
TNFRSF8-203ENST00000417814 CDC6Q99741 560 aa11.72□□□□□ -0.53
TNFRSF8-203ENST00000417814 LAT2Q9GZY6 243 aa11.72□□□□□ -0.53
TNFRSF8-203ENST00000417814 DNTTIP1Q9H147 329 aa11.72□□□□□ -0.53
TNFRSF8-203ENST00000417814 PRMT8Q9NR22 394 aaPredicted RBP11.72□□□□□ -0.53
TNFRSF8-203ENST00000417814 TLCD2A6NGC4 264 aa11.72□□□□□ -0.53
TNFRSF8-203ENST00000417814 A8MXK9 166 aa11.72□□□□□ -0.53
TNFRSF8-203ENST00000417814 RAB27BO00194 218 aa11.72□□□□□ -0.53
TNFRSF8-203ENST00000417814 CPN1P15169 458 aa11.72□□□□□ -0.53
TNFRSF8-203ENST00000417814 RAB11FIP2Q7L804 512 aa11.72□□□□□ -0.53
TNFRSF8-203ENST00000417814 GRINAQ7Z429 371 aa11.72□□□□□ -0.53
TNFRSF8-203ENST00000417814 PEG10Q86TG7 708 aaKnown RBP11.72□□□□□ -0.53
TNFRSF8-203ENST00000417814 LRRC75AQ8NAA5 344 aa11.72□□□□□ -0.53
TNFRSF8-203ENST00000417814 OR5M8Q8NGP6 311 aa11.72□□□□□ -0.53
TNFRSF8-203ENST00000417814 ZNF285Q96NJ3 590 aa11.72□□□□□ -0.53
TNFRSF8-203ENST00000417814 CNTNAP3BQ96NU0 1288 aa11.72□□□□□ -0.53
TNFRSF8-203ENST00000417814 ZNF814B7Z6K7 855 aa11.71□□□□□ -0.53
TNFRSF8-203ENST00000417814 ACTL6AO96019 429 aa11.71□□□□□ -0.53
TNFRSF8-203ENST00000417814 LCATP04180 440 aa11.71□□□□□ -0.53
TNFRSF8-203ENST00000417814 CCL2P13500 99 aa11.71□□□□□ -0.53
TNFRSF8-203ENST00000417814 ADH6P28332 368 aa11.71□□□□□ -0.53
TNFRSF8-203ENST00000417814 CX3CR1P49238 355 aa11.71□□□□□ -0.53
TNFRSF8-203ENST00000417814 PPIAP62937 165 aaKnown RBP11.71□□□□□ -0.53
TNFRSF8-203ENST00000417814 S100A12P80511 92 aa11.71□□□□□ -0.53
TNFRSF8-203ENST00000417814 ZNF684Q5T5D7 378 aa11.71□□□□□ -0.53
TNFRSF8-203ENST00000417814 OGFOD3Q6PK18 319 aa11.71□□□□□ -0.53
TNFRSF8-203ENST00000417814 DNM1P34Q6PK57 102 aa11.71□□□□□ -0.53
TNFRSF8-203ENST00000417814 TMEM234Q8WY98 164 aa11.71□□□□□ -0.53
TNFRSF8-203ENST00000417814 C14orf79Q96F83 325 aa11.71□□□□□ -0.53
TNFRSF8-203ENST00000417814 UCN2Q96RP3 112 aa11.71□□□□□ -0.53
TNFRSF8-203ENST00000417814 ALKBH4Q9NXW9 302 aa11.71□□□□□ -0.53
TNFRSF8-203ENST00000417814 NCOA6Q14686 2063 aaPredicted RBP11.71□□□□□ -0.54
TNFRSF8-203ENST00000417814 TTRP02766 147 aa11.71□□□□□ -0.54
TNFRSF8-203ENST00000417814 ARG1P05089 322 aa11.71□□□□□ -0.54
TNFRSF8-203ENST00000417814 POU2F2P09086 479 aa11.71□□□□□ -0.54
TNFRSF8-203ENST00000417814 MGMTP16455 207 aa11.71□□□□□ -0.54
TNFRSF8-203ENST00000417814 ABCA11PQ4W5N1 156 aa11.71□□□□□ -0.54
TNFRSF8-203ENST00000417814 OR10C1Q96KK4 312 aa11.71□□□□□ -0.54
TNFRSF8-203ENST00000417814 SLC25A21Q9BQT8 299 aaPredicted RBP11.71□□□□□ -0.54
TNFRSF8-203ENST00000417814 FBRSQ9HAH7 460 aa11.71□□□□□ -0.54
TNFRSF8-203ENST00000417814 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.71□□□□□ -0.54
TNFRSF8-203ENST00000417814 LANCL2Q9NS86 450 aa11.71□□□□□ -0.54
TNFRSF8-203ENST00000417814 ARHGAP21Q5T5U3 1957 aa11.71□□□□□ -0.54
TNFRSF8-203ENST00000417814 CAV2P51636 162 aa11.71□□□□□ -0.54
TNFRSF8-203ENST00000417814 JMJD6Q6NYC1 403 aaPredicted RBP11.71□□□□□ -0.54
TNFRSF8-203ENST00000417814 CATSPERDQ86XM0 798 aa11.71□□□□□ -0.54
TNFRSF8-203ENST00000417814 TCEAL3Q969E4 200 aa11.71□□□□□ -0.54
TNFRSF8-203ENST00000417814 FAAP24Q9BTP7 215 aa11.71□□□□□ -0.54
TNFRSF8-203ENST00000417814 S1PR5Q9H228 398 aa11.71□□□□□ -0.54
TNFRSF8-203ENST00000417814 SERINC1Q9NRX5 453 aa11.71□□□□□ -0.54
TNFRSF8-203ENST00000417814 PUS1Q9Y606 427 aaKnown RBP eCLIP11.71□□□□□ -0.54
TNFRSF8-203ENST00000417814 IGLV1-36A0A0B4J1U3 117 aa11.7□□□□□ -0.54
TNFRSF8-203ENST00000417814 RPS27AP62979 156 aaKnown RBP11.7□□□□□ -0.54
TNFRSF8-203ENST00000417814 UBA52P62987 128 aaKnown RBP11.7□□□□□ -0.54
TNFRSF8-203ENST00000417814 IL10RAQ13651 578 aa11.7□□□□□ -0.54
TNFRSF8-203ENST00000417814 CCDC36Q8IYA8 594 aa11.7□□□□□ -0.54
TNFRSF8-203ENST00000417814 SLC22A24Q8N4F4 322 aa11.7□□□□□ -0.54
TNFRSF8-203ENST00000417814 PHYHIPQ92561 330 aa11.7□□□□□ -0.54
TNFRSF8-203ENST00000417814 MRPL38Q96DV4 380 aaKnown RBP11.7□□□□□ -0.54
TNFRSF8-203ENST00000417814 CHST11Q9NPF2 352 aa11.7□□□□□ -0.54
TNFRSF8-203ENST00000417814 FREM1Q5H8C1 2179 aa11.7□□□□□ -0.54
TNFRSF8-203ENST00000417814 EML5Q05BV3 1969 aa11.7□□□□□ -0.54
TNFRSF8-203ENST00000417814 MED13LQ71F56 2210 aa11.7□□□□□ -0.54
TNFRSF8-203ENST00000417814 TRBV5-7A0A0A0MS05 114 aa11.7□□□□□ -0.54
TNFRSF8-203ENST00000417814 A0A0D9SG52 128 aa11.7□□□□□ -0.54
TNFRSF8-203ENST00000417814 MS4A18H0YCH9 400 aa11.7□□□□□ -0.54
TNFRSF8-203ENST00000417814 HPP00738 406 aa11.7□□□□□ -0.54
TNFRSF8-203ENST00000417814 EPHA1P21709 976 aa11.7□□□□□ -0.54
TNFRSF8-203ENST00000417814 MPGP29372 298 aa11.7□□□□□ -0.54
TNFRSF8-203ENST00000417814 SLC6A8P48029 635 aa11.7□□□□□ -0.54
TNFRSF8-203ENST00000417814 HNRNPKP61978 463 aaKnown RBP eCLIP11.7□□□□□ -0.54
TNFRSF8-203ENST00000417814 SNRPEP62304 92 aaKnown RBP11.7□□□□□ -0.54
TNFRSF8-203ENST00000417814 GABREP78334 506 aa11.7□□□□□ -0.54
TNFRSF8-203ENST00000417814 CLEC12BQ2HXU8 276 aa11.7□□□□□ -0.54
TNFRSF8-203ENST00000417814 MS4A18Q3C1V0 323 aa11.7□□□□□ -0.54
TNFRSF8-203ENST00000417814 CLEC18BQ6UXF7 455 aa11.7□□□□□ -0.54
TNFRSF8-203ENST00000417814 RNASE11Q8TAA1 199 aaKnown RBP11.7□□□□□ -0.54
TNFRSF8-203ENST00000417814 SECTM1Q8WVN6 248 aa11.7□□□□□ -0.54
TNFRSF8-203ENST00000417814 ZNF2Q9BSG1 426 aaPredicted RBP11.7□□□□□ -0.54
TNFRSF8-203ENST00000417814 SLC19A3Q9BZV2 496 aa11.7□□□□□ -0.54
TNFRSF8-203ENST00000417814 ZNF275Q9NSD4 429 aaPredicted RBP11.7□□□□□ -0.54
TNFRSF8-203ENST00000417814 ZNF629Q9UEG4 869 aaPredicted RBP11.7□□□□□ -0.54
TNFRSF8-203ENST00000417814 RNF222A6NCQ9 220 aa11.69□□□□□ -0.54
TNFRSF8-203ENST00000417814 TUBAL3A6NHL2 446 aa11.69□□□□□ -0.54
TNFRSF8-203ENST00000417814 DUX1O43812 170 aa11.69□□□□□ -0.54
TNFRSF8-203ENST00000417814 RAD51DO75771 328 aa11.69□□□□□ -0.54
TNFRSF8-203ENST00000417814 FGF2P09038 288 aa11.69□□□□□ -0.54
TNFRSF8-203ENST00000417814 TPT1P13693 172 aaKnown RBP11.69□□□□□ -0.54
TNFRSF8-203ENST00000417814 ZNF16P17020 682 aaPredicted RBP11.69□□□□□ -0.54
TNFRSF8-203ENST00000417814 MTCP1P56278 107 aa11.69□□□□□ -0.54
TNFRSF8-203ENST00000417814 SLC25A24Q6NUK1 477 aa11.69□□□□□ -0.54
TNFRSF8-203ENST00000417814 YRDCQ86U90 279 aaKnown RBP11.69□□□□□ -0.54
TNFRSF8-203ENST00000417814 LDLRAD3Q86YD5 345 aa11.69□□□□□ -0.54
TNFRSF8-203ENST00000417814 BAP18Q8IXM2 172 aa11.69□□□□□ -0.54
TNFRSF8-203ENST00000417814 OR8B12Q8NGG6 310 aa11.69□□□□□ -0.54
TNFRSF8-203ENST00000417814 AKR7LQ8NHP1 331 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms