RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 HLA-DPB1P04440 258 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 CD1AP06126 327 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 HCKP08631 526 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 NAT2P11245 290 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 CD53P19397 219 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 PCMT1P22061 227 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 CCL1P22362 96 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 GABRA5P31644 462 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 CDKN1AP38936 164 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 SRP9P49458 86 aaKnown RBP7.24□□□□□ -1.25
TRIM48-201ENST00000417545 PPOXP50336 477 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 TNFAIP6P98066 277 aaPredicted RBP7.24□□□□□ -1.25
TRIM48-201ENST00000417545 TPBGQ13641 420 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 OR8B8Q15620 311 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 PCGF3Q3KNV8 242 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 TIMM50Q3ZCQ8 353 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 PAMR1Q6UXH9 720 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 GPR141Q7Z602 305 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 SPERTQ8NA61 448 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 ZNF485Q8NCK3 441 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 OR10AD1Q8NGE0 317 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 OR5D14Q8NGL3 314 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 OR13C5Q8NGS8 318 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 OR10AC1Q8NH08 325 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 PP6455Q8WZ26 134 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 MUL1Q969V5 352 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 TMEM106AQ96A25 262 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 FGGYQ96C11 551 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 C10orf35Q96D05 121 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 CPNE2Q96FN4 548 aaPredicted RBP7.24□□□□□ -1.25
TRIM48-201ENST00000417545 TECTBQ96PL2 329 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 OR14A2Q96R54 314 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 TRAF4Q9BUZ4 470 aaPredicted RBP7.24□□□□□ -1.25
TRIM48-201ENST00000417545 PLEKHF2Q9H8W4 249 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 GPR173Q9NS66 373 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 C14orf119Q9NWQ9 140 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 SSR3Q9UNL2 185 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 SIRT4Q9Y6E7 314 aaPredicted RBP7.24□□□□□ -1.25
TRIM48-201ENST00000417545 V9GYS6 101 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 LOC100506127A0A0U1RQW1 187 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 A0A1B0GTI1 187 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 A0A1W2PPR1 153 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 TRIM64A6NGJ6 449 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 A6NLC8 198 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 C17orf100A8MU93 164 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 ARL6IP5O75915 188 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 SOD3P08294 240 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 SMIM18P0DKX4 95 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 CD36P16671 472 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 TNFRSF1AP19438 455 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 RAB3AP20336 220 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 ANOS1P23352 680 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 MYL9P24844 172 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 RPS25P62851 125 aaKnown RBP7.23□□□□□ -1.25
TRIM48-201ENST00000417545 CARTPTQ16568 116 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 MSMPQ1L6U9 139 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 ACSM3Q53FZ2 586 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 HSD17B12Q53GQ0 312 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 CEP78Q5JTW2 689 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 CEACAM19Q7Z692 300 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 DTX2Q86UW9 622 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 SERPINA12Q8IW75 414 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 PHC2Q8IXK0 858 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 OR51A4Q8NGJ6 313 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 OR13C9Q8NGT0 318 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 OR14K1Q8NGZ2 314 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 TRMT10AQ8TBZ6 339 aaKnown RBP7.23□□□□□ -1.25
TRIM48-201ENST00000417545 NPRL2Q8WTW4 380 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 DVL3Q92997 716 aaPredicted RBP7.23□□□□□ -1.25
TRIM48-201ENST00000417545 BORCS8Q96FH0 119 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 RNF170Q96K19 258 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 PGLYRP3Q96LB9 341 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 GPER1Q99527 375 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 SOX7Q9BT81 388 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 CXXC4Q9H2H0 198 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 SAP30LQ9HAJ7 183 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 TCF7L1Q9HCS4 588 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 ZNF275Q9NSD4 429 aaPredicted RBP7.23□□□□□ -1.25
TRIM48-201ENST00000417545 NDUFB11Q9NX14 153 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 PLEKHA6Q9Y2H5 1048 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 GSTK1Q9Y2Q3 226 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 RHBDD3Q9Y3P4 386 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 DSCAMO60469 2012 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 PKDREJQ9NTG1 2253 aa7.23□□□□□ -1.25
TRIM48-201ENST00000417545 GCN1Q92616 2671 aaKnown RBP7.22□□□□□ -1.25
TRIM48-201ENST00000417545 RAI1Q7Z5J4 1906 aaPredicted RBP7.22□□□□□ -1.25
TRIM48-201ENST00000417545 FAM230AA0A1W2PPH8 454 aa7.22□□□□□ -1.25
TRIM48-201ENST00000417545 A0A1W2PPK0 400 aa7.22□□□□□ -1.25
TRIM48-201ENST00000417545 hCG_1807616A0A1W2PRN6 198 aa7.22□□□□□ -1.25
TRIM48-201ENST00000417545 CCDC160A6NGH7 325 aa7.22□□□□□ -1.25
TRIM48-201ENST00000417545 ZSCAN5BA6NJL1 495 aa7.22□□□□□ -1.25
TRIM48-201ENST00000417545 GABRPO00591 440 aa7.22□□□□□ -1.25
TRIM48-201ENST00000417545 LMX1BO60663 402 aa7.22□□□□□ -1.25
TRIM48-201ENST00000417545 CYB5AP00167 134 aa7.22□□□□□ -1.25
TRIM48-201ENST00000417545 CST4P01036 141 aa7.22□□□□□ -1.25
TRIM48-201ENST00000417545 IGLV3-1P01715 115 aa7.22□□□□□ -1.25
TRIM48-201ENST00000417545 GRPP07492 148 aa7.22□□□□□ -1.25
TRIM48-201ENST00000417545 DANCRP0C864 163 aa7.22□□□□□ -1.25
TRIM48-201ENST00000417545 IRF2P14316 349 aa7.22□□□□□ -1.25
TRIM48-201ENST00000417545 PRKACBP22694 351 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms