RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 OR11A1Q9GZK7 315 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 SMCO3A2RU48 225 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 ZNF705GA8MUZ8 300 aaPredicted RBP13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 SFTPCP11686 197 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 PVRP15151 417 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 KLK2P20151 261 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 NTSR1P30989 418 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 UBE2KP61086 200 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 ZNF776Q68DI1 518 aaPredicted RBP13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 TCEAL6Q6IPX3 200 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 ZNF101Q8IZC7 436 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 TSACCQ96A04 125 aaPredicted RBP13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 GALNT14Q96FL9 552 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 TSPAN32Q96QS1 320 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 NICN1Q9BSH3 213 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 PBDC1Q9BVG4 233 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 LRIT1Q9P2V4 623 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 ZNF107Q9UII5 783 aaPredicted RBP13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 HS3ST3B1Q9Y662 390 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 COLEC10Q9Y6Z7 277 aa13.09□□□□□ -0.31
NCKIPSD-204ENST00000416649 A0A087WZY1 265 aa13.08□□□□□ -0.32
NCKIPSD-204ENST00000416649 ATXN7O15265 892 aaPredicted RBP13.08□□□□□ -0.32
NCKIPSD-204ENST00000416649 HEXBP07686 556 aa13.08□□□□□ -0.32
NCKIPSD-204ENST00000416649 ZNF708P17019 499 aa13.08□□□□□ -0.32
NCKIPSD-204ENST00000416649 PPM1FP49593 454 aaPredicted RBP13.08□□□□□ -0.32
NCKIPSD-204ENST00000416649 SUPT4H1P63272 117 aaKnown RBP13.08□□□□□ -0.32
NCKIPSD-204ENST00000416649 NFATC4Q14934 902 aa13.08□□□□□ -0.32
NCKIPSD-204ENST00000416649 COL13A1Q5TAT6 717 aaPredicted RBP13.08□□□□□ -0.32
NCKIPSD-204ENST00000416649 DGAT2L6Q6ZPD8 337 aa13.08□□□□□ -0.32
NCKIPSD-204ENST00000416649 OR4C3Q8NH37 302 aa13.08□□□□□ -0.32
NCKIPSD-204ENST00000416649 MUCL1Q96DR8 90 aa13.08□□□□□ -0.32
NCKIPSD-204ENST00000416649 SH3BGRL3Q9H299 93 aa13.08□□□□□ -0.32
NCKIPSD-204ENST00000416649 C19orf12Q9NSK7 152 aa13.08□□□□□ -0.32
NCKIPSD-204ENST00000416649 MEMO1Q9Y316 297 aa13.08□□□□□ -0.32
NCKIPSD-204ENST00000416649 MRPS2Q9Y399 296 aaKnown RBP13.08□□□□□ -0.32
NCKIPSD-204ENST00000416649 CLDN4O14493 209 aa13.08□□□□□ -0.32
NCKIPSD-204ENST00000416649 IFNA10P01566 189 aa13.08□□□□□ -0.32
NCKIPSD-204ENST00000416649 POU2F2P09086 479 aa13.08□□□□□ -0.32
NCKIPSD-204ENST00000416649 S1PR1P21453 382 aa13.08□□□□□ -0.32
NCKIPSD-204ENST00000416649 ZP2Q05996 745 aa13.08□□□□□ -0.32
NCKIPSD-204ENST00000416649 SPEM2Q0P670 501 aa13.08□□□□□ -0.32
NCKIPSD-204ENST00000416649 PHF19Q5T6S3 580 aa13.08□□□□□ -0.32
NCKIPSD-204ENST00000416649 ZNF765Q7L2R6 523 aa13.08□□□□□ -0.32
NCKIPSD-204ENST00000416649 DEFB119Q8N690 84 aa13.08□□□□□ -0.32
NCKIPSD-204ENST00000416649 POC1AQ8NBT0 407 aa13.08□□□□□ -0.32
NCKIPSD-204ENST00000416649 GPBAR1Q8TDU6 330 aa13.08□□□□□ -0.32
NCKIPSD-204ENST00000416649 THRSPQ92748 146 aa13.08□□□□□ -0.32
NCKIPSD-204ENST00000416649 SRMSQ9H3Y6 488 aa13.08□□□□□ -0.32
NCKIPSD-204ENST00000416649 OBP2AQ9NY56 170 aa13.08□□□□□ -0.32
NCKIPSD-204ENST00000416649 A0A0A6YYH2 397 aa13.07□□□□□ -0.32
NCKIPSD-204ENST00000416649 A0A1W2PQF6 199 aa13.07□□□□□ -0.32
NCKIPSD-204ENST00000416649 A6NJ64 397 aa13.07□□□□□ -0.32
NCKIPSD-204ENST00000416649 XKRYO14609 159 aa13.07□□□□□ -0.32
NCKIPSD-204ENST00000416649 EML2O95834 649 aa13.07□□□□□ -0.32
NCKIPSD-204ENST00000416649 ERVFRD-1P60508 538 aa13.07□□□□□ -0.32
NCKIPSD-204ENST00000416649 RPS4XP62701 263 aaKnown RBP13.07□□□□□ -0.32
NCKIPSD-204ENST00000416649 ZNHIT3Q15649 155 aaPredicted RBP13.07□□□□□ -0.32
NCKIPSD-204ENST00000416649 CHRDL2Q6WN34 429 aa13.07□□□□□ -0.32
NCKIPSD-204ENST00000416649 RAB39BQ96DA2 213 aa13.07□□□□□ -0.32
NCKIPSD-204ENST00000416649 WDR92Q96MX6 357 aa13.07□□□□□ -0.32
NCKIPSD-204ENST00000416649 MRPL37Q9BZE1 423 aaKnown RBP13.07□□□□□ -0.32
NCKIPSD-204ENST00000416649 ADAM19Q9H013 955 aa13.07□□□□□ -0.32
NCKIPSD-204ENST00000416649 BCO1Q9HAY6 547 aa13.07□□□□□ -0.32
NCKIPSD-204ENST00000416649 RAB22AQ9UL26 194 aa13.07□□□□□ -0.32
NCKIPSD-204ENST00000416649 GPR132Q9UNW8 380 aa13.07□□□□□ -0.32
NCKIPSD-204ENST00000416649 IGKV1D-42A0A075B6H8 117 aa13.07□□□□□ -0.32
NCKIPSD-204ENST00000416649 LOC107986453A0A1B0GWG9 222 aa13.07□□□□□ -0.32
NCKIPSD-204ENST00000416649 RNH1P13489 461 aaKnown RBP13.07□□□□□ -0.32
NCKIPSD-204ENST00000416649 MDKP21741 143 aaPredicted RBP13.07□□□□□ -0.32
NCKIPSD-204ENST00000416649 IL2RGP31785 369 aa13.07□□□□□ -0.32
NCKIPSD-204ENST00000416649 OR3A2P47893 321 aa13.07□□□□□ -0.32
NCKIPSD-204ENST00000416649 ASCL1P50553 236 aa13.07□□□□□ -0.32
NCKIPSD-204ENST00000416649 ADPRHP54922 357 aa13.07□□□□□ -0.32
NCKIPSD-204ENST00000416649 PSG6Q00889 435 aa13.07□□□□□ -0.32
NCKIPSD-204ENST00000416649 UNC119Q13432 240 aa13.07□□□□□ -0.32
NCKIPSD-204ENST00000416649 PRICKLE4Q2TBC4 344 aa13.07□□□□□ -0.32
NCKIPSD-204ENST00000416649 GGNBP1Q5YKI7 109 aa13.07□□□□□ -0.32
NCKIPSD-204ENST00000416649 TMEM92Q6UXU6 159 aa13.07□□□□□ -0.32
NCKIPSD-204ENST00000416649 MED25Q71SY5 747 aa13.07□□□□□ -0.32
NCKIPSD-204ENST00000416649 ST6GALNAC5Q9BVH7 336 aa13.07□□□□□ -0.32
NCKIPSD-204ENST00000416649 FGF22Q9HCT0 170 aa13.07□□□□□ -0.32
NCKIPSD-204ENST00000416649 HHLA2Q9UM44 414 aa13.07□□□□□ -0.32
NCKIPSD-204ENST00000416649 SLCO1B1Q9Y6L6 691 aa13.07□□□□□ -0.32
NCKIPSD-204ENST00000416649 H0YL77 283 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 P2RY10O00398 339 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 SLC16A7O60669 478 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 TRGC1P0CF51 173 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 DHPSP49366 369 aaPredicted RBP13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 SLC35A1P78382 337 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 RELQ04864 619 aaPredicted RBP13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 ZNF74Q16587 644 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 HIST2H3PS2Q5TEC6 136 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 SLC18B1Q6NT16 456 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 OPN5Q6U736 354 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 TMEM182Q6ZP80 229 aaPredicted RBP13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 Q6ZS52 159 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 LCN9Q8WX39 176 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 FGGYQ96C11 551 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 COX14Q96I36 57 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms