RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 FBXW4P57775 412 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 CLRN1P58418 232 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 CFHR1Q03591 330 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 TGIF1Q15583 401 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 SLC9A3R2Q15599 337 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 GFOD2Q3B7J2 385 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 PLAC9Q5JTB6 97 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 NKAPLQ5M9Q1 402 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 LANCL3Q6ZV70 420 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 DOK3Q7L591 496 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 LHFPL1Q86WI0 220 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 UEVLDQ8IX04 471 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 PRSS58Q8IYP2 241 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 APCDD1LQ8NCL9 501 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 TSTD1Q8NFU3 115 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 RHBDD1Q8TEB9 315 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 RLN3Q8WXF3 142 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 TMEM230Q96A57 120 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 ZNF501Q96CX3 271 aaPredicted RBP8.65□□□□□ -1.02
CD44-206ENST00000415148 TMEM41AQ96HV5 264 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 SEC11CQ9BY50 192 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 HRH4Q9H3N8 390 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 C5orf66Q9H5L9 145 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 OR2S2Q9NQN1 319 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 B3GAT1Q9P2W7 334 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 LHFPL6Q9Y693 200 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 MED12Q93074 2177 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 IGLV3-12A0A075B6K2 115 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 A0A1W2PP11 408 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 FIGNL2A6NMB9 653 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 ZNF705EA8MWA4 302 aaPredicted RBP8.65□□□□□ -1.02
CD44-206ENST00000415148 AGPAT2O15120 278 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 SNAPINO95295 136 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 IGHG1P01857 330 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 ACAA1P09110 424 aaPredicted RBP8.65□□□□□ -1.02
CD44-206ENST00000415148 RCC1P18754 421 aaPredicted RBP8.65□□□□□ -1.02
CD44-206ENST00000415148 CTSSP25774 331 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 FKBP2P26885 142 aaKnown RBP8.65□□□□□ -1.02
CD44-206ENST00000415148 ALDH3B1P43353 468 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 MEOX2P50222 304 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 TMEM50BP56557 158 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 GABREP78334 506 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 FOXF1Q12946 379 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 ARL6IP1Q15041 203 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 SURF2Q15527 256 aaPredicted RBP8.65□□□□□ -1.02
CD44-206ENST00000415148 ZNF239Q16600 458 aaKnown RBP8.65□□□□□ -1.02
CD44-206ENST00000415148 AKIRIN2Q53H80 203 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 C1orf189Q5VU69 101 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 EIF5AL1Q6IS14 154 aaKnown RBP8.65□□□□□ -1.02
CD44-206ENST00000415148 SLC25A47Q6Q0C1 308 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 CLEC18BQ6UXF7 455 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 Q7L0L9 218 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 SPAG16Q8N0X2 631 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 SMRP1Q8NCR6 262 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 NOXO1Q8NFA2 376 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 OR5H2Q8NGV7 314 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 SSC4DQ8WTU2 575 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 GLYATL2Q8WU03 294 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 C2orf50Q96LR7 162 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 CRB3Q9BUF7 120 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 TMEM59Q9BXS4 323 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 UQCC1Q9NVA1 299 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 LINC00587B1AMM8 73 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 MFNGO00587 321 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 SOCS1O15524 211 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 CA11O75493 328 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 MPIG6BO95866 241 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 ECI1P42126 302 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 NPY4RP50391 375 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 ZNF41P51814 821 aaPredicted RBP8.64□□□□□ -1.03
CD44-206ENST00000415148 NXPH1P58417 271 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 TAS2R46P59540 309 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 GRB2P62993 217 aaKnown RBP8.64□□□□□ -1.03
CD44-206ENST00000415148 PJVKQ0ZLH3 352 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 PDZK1IP1Q13113 114 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 PPA1Q15181 289 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 SMAD2Q15796 467 aaKnown RBP8.64□□□□□ -1.03
CD44-206ENST00000415148 RTL6Q6ICC9 239 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 WDR74Q6RFH5 385 aaPredicted RBP8.64□□□□□ -1.03
CD44-206ENST00000415148 SLC16A13Q7RTY0 426 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 ANKRD37Q7Z713 158 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 OR5L2Q8NGL0 311 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 OR6X1Q8NH79 312 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 OR10C1Q96KK4 312 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 RTBDNQ9BSG5 229 aaPredicted RBP8.64□□□□□ -1.03
CD44-206ENST00000415148 EMC6Q9BV81 110 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 SLC26A1Q9H2B4 701 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 VDAC3Q9Y277 283 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 LOC102725191A0A1B0GVB3 256 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 C2orf72A6NCS6 295 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 C2CD4DB7Z1M9 353 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 EFNA2O43921 213 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 RAD51DO75771 328 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 CSTBP04080 98 aaKnown RBP8.64□□□□□ -1.03
CD44-206ENST00000415148 GLB1P16278 677 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 ABOP16442 354 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 BCKDHBP21953 392 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 PTGFRP43088 359 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 LPAR6P43657 344 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 ZNF121P58317 390 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms