RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 POC1AQ8NBT0 407 aa8.68□□□□□ -1.02
SS18-203ENST00000415083 NOXO1Q8NFA2 376 aa8.68□□□□□ -1.02
SS18-203ENST00000415083 OR4K17Q8NGC6 315 aa8.68□□□□□ -1.02
SS18-203ENST00000415083 PAQR8Q8TEZ7 354 aa8.68□□□□□ -1.02
SS18-203ENST00000415083 TMED6Q8WW62 240 aa8.68□□□□□ -1.02
SS18-203ENST00000415083 OCSTAMPQ9BR26 566 aa8.68□□□□□ -1.02
SS18-203ENST00000415083 SLC6A15Q9H2J7 730 aa8.68□□□□□ -1.02
SS18-203ENST00000415083 ALKBH4Q9NXW9 302 aa8.68□□□□□ -1.02
SS18-203ENST00000415083 MRPS28Q9Y2Q9 187 aaKnown RBP8.68□□□□□ -1.02
SS18-203ENST00000415083 METTL21EPA6NDL7 271 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 MPIG6BO95866 241 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 CD63P08962 238 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 RCC1P18754 421 aaPredicted RBP8.67□□□□□ -1.02
SS18-203ENST00000415083 C17orf67Q0P5P2 114 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 UBE2V2Q15819 145 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 SGCAQ16586 387 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 Q6ZPA2 131 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 OR5D18Q8NGL1 313 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 DCUN1D4Q92564 292 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 BSCL2Q96G97 398 aaPredicted RBP8.67□□□□□ -1.02
SS18-203ENST00000415083 SLC5A7Q9GZV3 580 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 LMAN1LQ9HAT1 526 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 FAM96BQ9Y3D0 163 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 LY6G6EA0A0G2JKS1 128 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 SFT2D2O95562 160 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 CELA2AP08217 269 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 SLC6A9P48067 706 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 PNLIPRP3Q17RR3 467 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.67□□□□□ -1.02
SS18-203ENST00000415083 TSTD1Q8NFU3 115 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 CPNE2Q96FN4 548 aaPredicted RBP8.67□□□□□ -1.02
SS18-203ENST00000415083 FAM71F1Q96KD3 344 aaPredicted RBP8.67□□□□□ -1.02
SS18-203ENST00000415083 MCTS1Q9ULC4 181 aaKnown RBP8.67□□□□□ -1.02
SS18-203ENST00000415083 FLVCR1Q9Y5Y0 555 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 U3KQA8 63 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 IGLV3-32A0A0A0MS00 114 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 ZNF98A6NK75 572 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 H7C2Y5 167 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 LINC01387J3KSC0 135 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 WDPCPO95876 746 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 HPNP05981 417 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 NFYBP25208 207 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 PTGER4P35408 488 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 GSK3AP49840 483 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 AKIRIN2Q53H80 203 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 C5orf46Q6UWT4 87 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 ABHD12BQ7Z5M8 362 aaPredicted RBP8.67□□□□□ -1.02
SS18-203ENST00000415083 OR5D14Q8NGL3 314 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 HDHD3Q9BSH5 251 aaPredicted RBP8.67□□□□□ -1.02
SS18-203ENST00000415083 SLC26A1Q9H2B4 701 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 PIGMQ9H3S5 423 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 COMMD9Q9P000 198 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 PRELID3BQ9Y3B1 194 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 ZNF175Q9Y473 711 aa8.67□□□□□ -1.02
SS18-203ENST00000415083 TRBV11-1A0A0K0K1C0 115 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 RAB19A4D1S5 217 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 ACY1Q03154 408 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 RAB32Q13637 225 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 ZNF528Q3MIS6 628 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 TMEM128Q5BJH2 165 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 OR2A2Q6IF42 318 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 HAGHLQ6PII5 290 aaPredicted RBP8.66□□□□□ -1.02
SS18-203ENST00000415083 ETV3LQ6ZN32 361 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 RAB3CQ96E17 227 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 ZNF837Q96EG3 531 aaPredicted RBP8.66□□□□□ -1.02
SS18-203ENST00000415083 B3GALT5Q9Y2C3 310 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 RPH3AQ9Y2J0 694 aaPredicted RBP8.66□□□□□ -1.02
SS18-203ENST00000415083 ZFHX4Q86UP3 3567 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 PCSK5Q92824 1860 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 C5orf51A6NDU8 294 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 SIGLEC6O43699 453 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 LPAR6P43657 344 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 CX3CR1P49238 355 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 ZNF84P51523 738 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 DAZAP2Q15038 168 aaPredicted RBP8.66□□□□□ -1.02
SS18-203ENST00000415083 THEM4Q5T1C6 240 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 RHBDD2Q6NTF9 364 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 TMEM17Q86X19 198 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 ZNF248Q8NDW4 579 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 OR2M3Q8NG83 312 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 TMEM234Q8WY98 164 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 NABP1Q96AH0 204 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 DDIT4LQ96D03 193 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 C12orf57Q99622 126 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 SCRT1Q9BWW7 348 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 SEC61A2Q9H9S3 476 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 CARHSP1Q9Y2V2 147 aaKnown RBP8.66□□□□□ -1.02
SS18-203ENST00000415083 MEX3AA1L020 520 aaKnown RBP8.66□□□□□ -1.02
SS18-203ENST00000415083 ZNF878C9JN71 531 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 OR2J2O76002 312 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 ZNF205O95201 554 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 HTR3BO95264 441 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 NAT2P11245 290 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 NTF4P34130 210 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 GPR85P60893 370 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 HGFACQ04756 655 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 ENDOGQ14249 297 aaKnown RBP8.66□□□□□ -1.02
SS18-203ENST00000415083 KCNMB1Q16558 191 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 DNM1P34Q6PK57 102 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms