RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 A0A0B4J2A0 478 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 MPTX1A8MV57 137 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 F8VVB4 439 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 F8VWA3 439 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 MFNGO00587 321 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 SFT2D2O95562 160 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 CCL1P22362 96 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 DHPSP49366 369 aaPredicted RBP13.19□□□□□ -0.3
TTC39A-208ENST00000413473 HIST3H3Q16695 136 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 PNLIPRP3Q17RR3 467 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 LCN10Q6JVE6 187 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 C1QL2Q7Z5L3 287 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 WDSUB1Q8N9V3 476 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 ZSCAN4Q8NAM6 433 aaPredicted RBP13.19□□□□□ -0.3
TTC39A-208ENST00000413473 OR51T1Q8NGJ9 327 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 NPRL2Q8WTW4 380 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 DNASE2BQ8WZ79 361 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 URM1Q9BTM9 101 aaKnown RBP13.19□□□□□ -0.3
TTC39A-208ENST00000413473 NKX6-2Q9C056 277 aaPredicted RBP13.19□□□□□ -0.3
TTC39A-208ENST00000413473 SHPKQ9UHJ6 478 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 CEACAM18A8MTB9 384 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 SDCBPO00560 298 aaPredicted RBP13.19□□□□□ -0.3
TTC39A-208ENST00000413473 AMY2BP19961 511 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 SUPT4H1P63272 117 aaKnown RBP13.19□□□□□ -0.3
TTC39A-208ENST00000413473 ACTBL2Q562R1 376 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 PRAMEF20Q5VT98 475 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 BAP18Q8IXM2 172 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 BHLHE23Q8NDY6 225 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 OR14K1Q8NGZ2 314 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 STOML3Q8TAV4 291 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 PAQR8Q8TEZ7 354 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 LIN37Q96GY3 246 aaPredicted RBP13.19□□□□□ -0.3
TTC39A-208ENST00000413473 SPSB2Q99619 263 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 RTBDNQ9BSG5 229 aaPredicted RBP13.19□□□□□ -0.3
TTC39A-208ENST00000413473 ZNF416Q9BWM5 594 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 OR10A2Q9H208 303 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 FLVCR1Q9Y5Y0 555 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 B3GALT1Q9Y5Z6 326 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 PI4KAP42356 2102 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 TOX3O15405 576 aaPredicted RBP13.19□□□□□ -0.3
TTC39A-208ENST00000413473 FGF16O43320 207 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 HTR3BO95264 441 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 TPT1P13693 172 aaKnown RBP13.19□□□□□ -0.3
TTC39A-208ENST00000413473 CLDN17P56750 224 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 ZNF169Q14929 603 aaPredicted RBP13.19□□□□□ -0.3
TTC39A-208ENST00000413473 SHBQ15464 509 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 KCNMB1Q16558 191 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 PDSS1Q5T2R2 415 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 SSC4DQ8WTU2 575 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 MAFIPQ8WZ33 124 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 RASL10BQ96S79 203 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 DEFB126Q9BYW3 111 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 AKIRIN1Q9H9L7 192 aaPredicted RBP13.19□□□□□ -0.3
TTC39A-208ENST00000413473 CYTL1Q9NRR1 136 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 RARRES3Q9UL19 164 aa13.19□□□□□ -0.3
TTC39A-208ENST00000413473 RAB19A4D1S5 217 aa13.18□□□□□ -0.3
TTC39A-208ENST00000413473 OR3A2P47893 321 aa13.18□□□□□ -0.3
TTC39A-208ENST00000413473 AIMP2Q13155 320 aaKnown RBP13.18□□□□□ -0.3
TTC39A-208ENST00000413473 KISS1Q15726 138 aa13.18□□□□□ -0.3
TTC39A-208ENST00000413473 ANKRD55Q3KP44 614 aa13.18□□□□□ -0.3
TTC39A-208ENST00000413473 UQCC3Q6UW78 93 aa13.18□□□□□ -0.3
TTC39A-208ENST00000413473 FAM219AQ8IW50 185 aa13.18□□□□□ -0.3
TTC39A-208ENST00000413473 SLC30A7Q8NEW0 376 aa13.18□□□□□ -0.3
TTC39A-208ENST00000413473 OR13G1Q8NGZ3 307 aa13.18□□□□□ -0.3
TTC39A-208ENST00000413473 SLC22A8Q8TCC7 542 aa13.18□□□□□ -0.3
TTC39A-208ENST00000413473 SPACA9Q96E40 222 aaPredicted RBP13.18□□□□□ -0.3
TTC39A-208ENST00000413473 PGAM5Q96HS1 289 aa13.18□□□□□ -0.3
TTC39A-208ENST00000413473 RAB18Q9NP72 206 aa13.18□□□□□ -0.3
TTC39A-208ENST00000413473 SLC39A1Q9NY26 324 aa13.18□□□□□ -0.3
TTC39A-208ENST00000413473 MRPS17Q9Y2R5 130 aaKnown RBP13.18□□□□□ -0.3
TTC39A-208ENST00000413473 TMEM218A2RU14 115 aa13.18□□□□□ -0.3
TTC39A-208ENST00000413473 MSGN1A6NI15 193 aa13.18□□□□□ -0.3
TTC39A-208ENST00000413473 AQP7P3A6NL99 342 aa13.18□□□□□ -0.3
TTC39A-208ENST00000413473 ATG12O94817 140 aa13.18□□□□□ -0.3
TTC39A-208ENST00000413473 ICAM2P13598 275 aa13.18□□□□□ -0.3
TTC39A-208ENST00000413473 GLRA1P23415 457 aa13.18□□□□□ -0.3
TTC39A-208ENST00000413473 FPR2P25090 351 aa13.18□□□□□ -0.3
TTC39A-208ENST00000413473 SNU13P55769 128 aaKnown RBP13.18□□□□□ -0.3
TTC39A-208ENST00000413473 GRB2P62993 217 aaKnown RBP13.18□□□□□ -0.3
TTC39A-208ENST00000413473 AADACL3Q5VUY0 350 aa13.18□□□□□ -0.3
TTC39A-208ENST00000413473 GUSBP11Q6P575 273 aa13.18□□□□□ -0.3
TTC39A-208ENST00000413473 TMED6Q8WW62 240 aa13.18□□□□□ -0.3
TTC39A-208ENST00000413473 LYZL4Q96KX0 146 aa13.18□□□□□ -0.3
TTC39A-208ENST00000413473 A0A1W2PQM1 296 aa13.17□□□□□ -0.3
TTC39A-208ENST00000413473 F5H5K5 113 aa13.17□□□□□ -0.3
TTC39A-208ENST00000413473 PTGFRP43088 359 aa13.17□□□□□ -0.3
TTC39A-208ENST00000413473 CSNK2A1P68400 391 aaPredicted RBP13.17□□□□□ -0.3
TTC39A-208ENST00000413473 FAM189A2Q15884 450 aa13.17□□□□□ -0.3
TTC39A-208ENST00000413473 NKAPLQ5M9Q1 402 aa13.17□□□□□ -0.3
TTC39A-208ENST00000413473 PEG10Q86TG7 708 aaKnown RBP13.17□□□□□ -0.3
TTC39A-208ENST00000413473 FAM89BQ8N5H3 189 aa13.17□□□□□ -0.3
TTC39A-208ENST00000413473 PNLDC1Q8NA58 520 aaKnown RBP13.17□□□□□ -0.3
TTC39A-208ENST00000413473 CLRN3Q8NCR9 226 aa13.17□□□□□ -0.3
TTC39A-208ENST00000413473 CSNK2A3Q8NEV1 391 aa13.17□□□□□ -0.3
TTC39A-208ENST00000413473 OR10C1Q96KK4 312 aa13.17□□□□□ -0.3
TTC39A-208ENST00000413473 TSNAXQ99598 290 aaKnown RBP13.17□□□□□ -0.3
TTC39A-208ENST00000413473 CDC6Q99741 560 aa13.17□□□□□ -0.3
TTC39A-208ENST00000413473 OR5AC2Q9NZP5 309 aa13.17□□□□□ -0.3
TTC39A-208ENST00000413473 HDGFL3Q9Y3E1 203 aa13.17□□□□□ -0.3
TTC39A-208ENST00000413473 STMND1H3BQB6 276 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms