RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 BPIFB2Q8N4F0 458 aa13.12□□□□□ -0.31
MCF2L-211ENST00000413354 OR8B12Q8NGG6 310 aa13.12□□□□□ -0.31
MCF2L-211ENST00000413354 FAM81AQ8TBF8 368 aa13.12□□□□□ -0.31
MCF2L-211ENST00000413354 ZFAND2BQ8WV99 257 aa13.12□□□□□ -0.31
MCF2L-211ENST00000413354 OR8B4Q96RC9 309 aa13.12□□□□□ -0.31
MCF2L-211ENST00000413354 RBM4BQ9BQ04 359 aaKnown RBP13.12□□□□□ -0.31
MCF2L-211ENST00000413354 RTL8AQ9BWD3 113 aa13.12□□□□□ -0.31
MCF2L-211ENST00000413354 GABARAPL3Q9BY60 117 aa13.12□□□□□ -0.31
MCF2L-211ENST00000413354 SEMA6AQ9H2E6 1030 aa13.12□□□□□ -0.31
MCF2L-211ENST00000413354 RNPEPL1Q9HAU8 725 aa13.12□□□□□ -0.31
MCF2L-211ENST00000413354 OAZ3Q9UMX2 235 aa13.12□□□□□ -0.31
MCF2L-211ENST00000413354 IGHV2-70DA0A0C4DH43 119 aa13.11□□□□□ -0.31
MCF2L-211ENST00000413354 A0A0U1RQV5 110 aa13.11□□□□□ -0.31
MCF2L-211ENST00000413354 TMEM269A0A1B0GVZ9 245 aa13.11□□□□□ -0.31
MCF2L-211ENST00000413354 OOEPA6NGQ2 149 aa13.11□□□□□ -0.31
MCF2L-211ENST00000413354 FSHBP01225 129 aa13.11□□□□□ -0.31
MCF2L-211ENST00000413354 ATP6V1B1P15313 513 aa13.11□□□□□ -0.31
MCF2L-211ENST00000413354 FPR2P25090 351 aa13.11□□□□□ -0.31
MCF2L-211ENST00000413354 EPHA2P29317 976 aa13.11□□□□□ -0.31
MCF2L-211ENST00000413354 SRSF2Q01130 221 aaKnown RBP13.11□□□□□ -0.31
MCF2L-211ENST00000413354 AADACL4Q5VUY2 407 aa13.11□□□□□ -0.31
MCF2L-211ENST00000413354 SLC35F2Q8IXU6 374 aa13.11□□□□□ -0.31
MCF2L-211ENST00000413354 C10orf67Q8IYJ2 551 aa13.11□□□□□ -0.31
MCF2L-211ENST00000413354 BOLLQ8N9W6 283 aaKnown RBP13.11□□□□□ -0.31
MCF2L-211ENST00000413354 OR1M1Q8NGA1 313 aa13.11□□□□□ -0.31
MCF2L-211ENST00000413354 PYDC1Q8WXC3 89 aa13.11□□□□□ -0.31
MCF2L-211ENST00000413354 MOB1AQ9H8S9 216 aa13.11□□□□□ -0.31
MCF2L-211ENST00000413354 HAO2Q9NYQ3 351 aa13.11□□□□□ -0.31
MCF2L-211ENST00000413354 ERVK-18Q9QC07 812 aa13.11□□□□□ -0.31
MCF2L-211ENST00000413354 IKZF2Q9UKS7 526 aa13.11□□□□□ -0.31
MCF2L-211ENST00000413354 RHBDD3Q9Y3P4 386 aa13.11□□□□□ -0.31
MCF2L-211ENST00000413354 ORC6Q9Y5N6 252 aa13.11□□□□□ -0.31
MCF2L-211ENST00000413354 SAC3D1A6NKF1 404 aa13.1□□□□□ -0.31
MCF2L-211ENST00000413354 TMEM210A6NLX4 147 aa13.1□□□□□ -0.31
MCF2L-211ENST00000413354 ZNF670-ZNF695F2Z2N8 137 aa13.1□□□□□ -0.31
MCF2L-211ENST00000413354 C3orf80F5H4A9 247 aa13.1□□□□□ -0.31
MCF2L-211ENST00000413354 M0R129 80 aa13.1□□□□□ -0.31
MCF2L-211ENST00000413354 CST4P01036 141 aa13.1□□□□□ -0.31
MCF2L-211ENST00000413354 PPIAL4GP0DN37 164 aa13.1□□□□□ -0.31
MCF2L-211ENST00000413354 CD80P33681 288 aa13.1□□□□□ -0.31
MCF2L-211ENST00000413354 PSMB10P40306 273 aa13.1□□□□□ -0.31
MCF2L-211ENST00000413354 MAP2K3P46734 347 aa13.1□□□□□ -0.31
MCF2L-211ENST00000413354 HCCSP53701 268 aa13.1□□□□□ -0.31
MCF2L-211ENST00000413354 EFNB1P98172 346 aa13.1□□□□□ -0.31
MCF2L-211ENST00000413354 POU4F2Q12837 409 aa13.1□□□□□ -0.31
MCF2L-211ENST00000413354 WDR25Q64LD2 544 aaPredicted RBP13.1□□□□□ -0.31
MCF2L-211ENST00000413354 COMMD2Q86X83 199 aa13.1□□□□□ -0.31
MCF2L-211ENST00000413354 GALNT4Q8N4A0 578 aa13.1□□□□□ -0.31
MCF2L-211ENST00000413354 GCSAMQ8N6F7 178 aa13.1□□□□□ -0.31
MCF2L-211ENST00000413354 C19orf18Q8NEA5 215 aa13.1□□□□□ -0.31
MCF2L-211ENST00000413354 SEMA6DQ8NFY4 1073 aa13.1□□□□□ -0.31
MCF2L-211ENST00000413354 RAB40AQ8WXH6 277 aa13.1□□□□□ -0.31
MCF2L-211ENST00000413354 ITPKCQ96DU7 683 aa13.1□□□□□ -0.31
MCF2L-211ENST00000413354 TECTBQ96PL2 329 aa13.1□□□□□ -0.31
MCF2L-211ENST00000413354 IL4I1Q96RQ9 567 aa13.1□□□□□ -0.31
MCF2L-211ENST00000413354 RIBC2Q9H4K1 309 aa13.1□□□□□ -0.31
MCF2L-211ENST00000413354 CLN6Q9NWW5 311 aa13.1□□□□□ -0.31
MCF2L-211ENST00000413354 FAM206AQ9NX38 181 aa13.1□□□□□ -0.31
MCF2L-211ENST00000413354 WARS2Q9UGM6 360 aaKnown RBP13.1□□□□□ -0.31
MCF2L-211ENST00000413354 COPS3Q9UNS2 423 aa13.1□□□□□ -0.31
MCF2L-211ENST00000413354 ZNF816-ZNF321PA0A0X1KG74 233 aa13.09□□□□□ -0.31
MCF2L-211ENST00000413354 PSMD9O00233 223 aa13.09□□□□□ -0.31
MCF2L-211ENST00000413354 ADAM20O43506 726 aa13.09□□□□□ -0.31
MCF2L-211ENST00000413354 ENSAO43768 121 aaKnown RBP13.09□□□□□ -0.31
MCF2L-211ENST00000413354 VENTXO95231 258 aa13.09□□□□□ -0.31
MCF2L-211ENST00000413354 ACKR3P25106 362 aa13.09□□□□□ -0.31
MCF2L-211ENST00000413354 HILS1P60008 231 aa13.09□□□□□ -0.31
MCF2L-211ENST00000413354 CDC42P60953 191 aa13.09□□□□□ -0.31
MCF2L-211ENST00000413354 CXCR4P61073 352 aa13.09□□□□□ -0.31
MCF2L-211ENST00000413354 PAX2Q02962 417 aa13.09□□□□□ -0.31
MCF2L-211ENST00000413354 PAX8Q06710 450 aa13.09□□□□□ -0.31
MCF2L-211ENST00000413354 EGR3Q06889 387 aa13.09□□□□□ -0.31
MCF2L-211ENST00000413354 PRDX4Q13162 271 aa13.09□□□□□ -0.31
MCF2L-211ENST00000413354 KPNB1Q14974 876 aaKnown RBP13.09□□□□□ -0.31
MCF2L-211ENST00000413354 TEX36Q5VZQ5 186 aa13.09□□□□□ -0.31
MCF2L-211ENST00000413354 CD276Q5ZPR3 534 aa13.09□□□□□ -0.31
MCF2L-211ENST00000413354 SFRP4Q6FHJ7 346 aaPredicted RBP13.09□□□□□ -0.31
MCF2L-211ENST00000413354 ZNF322Q6U7Q0 402 aaPredicted RBP13.09□□□□□ -0.31
MCF2L-211ENST00000413354 ZNF826PQ6ZT77 177 aa13.09□□□□□ -0.31
MCF2L-211ENST00000413354 BCDIN3DQ7Z5W3 292 aaKnown RBP13.09□□□□□ -0.31
MCF2L-211ENST00000413354 ZDHHC23Q8IYP9 409 aa13.09□□□□□ -0.31
MCF2L-211ENST00000413354 OR8J1Q8NGP2 316 aa13.09□□□□□ -0.31
MCF2L-211ENST00000413354 LRRC29Q8WV35 223 aa13.09□□□□□ -0.31
MCF2L-211ENST00000413354 LYZL4Q96KX0 146 aa13.09□□□□□ -0.31
MCF2L-211ENST00000413354 HIST1H2AAQ96QV6 131 aa13.09□□□□□ -0.31
MCF2L-211ENST00000413354 SLC6A7Q99884 636 aa13.09□□□□□ -0.31
MCF2L-211ENST00000413354 NUDT16L1Q9BRJ7 211 aaKnown RBP13.09□□□□□ -0.31
MCF2L-211ENST00000413354 PBOV1Q9GZY1 135 aa13.09□□□□□ -0.31
MCF2L-211ENST00000413354 TLNRD1Q9H1K6 362 aa13.09□□□□□ -0.31
MCF2L-211ENST00000413354 ADGRL4Q9HBW9 690 aa13.09□□□□□ -0.31
MCF2L-211ENST00000413354 NUFIP1Q9UHK0 495 aaKnown RBP13.09□□□□□ -0.31
MCF2L-211ENST00000413354 NUP50Q9UKX7 468 aa13.09□□□□□ -0.31
MCF2L-211ENST00000413354 ZNF850A8MQ14 1090 aa13.08□□□□□ -0.32
MCF2L-211ENST00000413354 TRIM77I1YAP6 450 aa13.08□□□□□ -0.32
MCF2L-211ENST00000413354 EBAG9O00559 213 aa13.08□□□□□ -0.32
MCF2L-211ENST00000413354 MTRF1O75570 445 aaKnown RBP13.08□□□□□ -0.32
MCF2L-211ENST00000413354 LHBP01229 141 aa13.08□□□□□ -0.32
MCF2L-211ENST00000413354 MUC1P15941 1255 aaPredicted RBP13.08□□□□□ -0.32
MCF2L-211ENST00000413354 HTR1FP30939 366 aa13.08□□□□□ -0.32
MCF2L-211ENST00000413354 CFHR2P36980 270 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms