RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 ATP6V0BQ99437 205 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 FEZ1Q99689 392 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 SIGMAR1Q99720 223 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 REEP2Q9BRK0 252 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 APOL6Q9BWW8 343 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 LRRC27Q9C0I9 530 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 YIPF3Q9GZM5 350 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 ABCG8Q9H221 673 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 HSD3B7Q9H2F3 369 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 MS4A6AQ9H2W1 248 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 RIMS4Q9H426 269 aaPredicted RBP-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 C3orf14Q9HBI5 128 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 PREBQ9HCU5 417 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 TMEM100Q9NV29 134 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 IFT80Q9P2H3 777 aaPredicted RBP-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 SEC14L4Q9UDX3 406 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 TAC3Q9UHF0 121 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 CES1P1Q9UKY3 287 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 APLNQ9ULZ1 77 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 PRDM15P57071 1507 aaPredicted RBP-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 PLXNC1O60486 1568 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 DOCK5Q9H7D0 1870 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 SCN8AQ9UQD0 1980 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 NISCHQ9Y2I1 1504 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 FAM236AA0A1B0GUQ0 79 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 FAM236BA0A1B0GV22 79 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 TRIM64A6NGJ6 449 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 OR5H1A6NKK0 313 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 SDR42E2A6NKP2 422 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 OR5B21A6NL26 309 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 HACD1B0YJ81 288 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 E9PBE3 544 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 I3L2K1 104 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 K7EPK0 472 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 O00370 1275 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 NUPR1O60356 82 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 NMT2O60551 498 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 TOM1O60784 492 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 GUCY1B2O75343 617 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 REM1O75628 298 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 SCO1O75880 301 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 OAS1P00973 400 aaKnown RBP-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 RPN1P04843 607 aaKnown RBP-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 APODP05090 189 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 SMIM10L1P0DMW3 83 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 PTHLHP12272 177 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 CTLA4P16410 223 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 ZNF24P17028 368 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 GABRG2P18507 467 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 NELFEP18615 380 aaKnown RBP-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 AGAP20933 346 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 CCNOP22674 350 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 SERPINA4P29622 427 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 SLC6A1P30531 599 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 CYLC1P35663 651 aaPredicted RBP-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 PTGFRP43088 359 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 RPL29P47914 159 aaKnown RBP-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 HSPA13P48723 471 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 NCBP2P52298 156 aaKnown RBP eCLIP-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 SLC16A1P53985 500 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 SLC26A5P58743 744 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 TAS2R43P59537 309 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 TAS2R50P59544 299 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 UBE2D3P61077 147 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 UBE2D2P62837 147 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 IFIT5Q13325 482 aaKnown RBP-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 FAM50AQ14320 339 aaKnown RBP-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 STARD3Q14849 445 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 ZNF56Q15929 161 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 POU2AF1Q16633 256 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 GPR33Q49SQ1 333 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 HSP90B2PQ58FF3 399 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 ZNF678Q5SXM1 525 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 LYPLAL1Q5VWZ2 237 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 NXNL2Q5VZ03 156 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 NEPROQ6NW34 567 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 H3F3CQ6NXT2 135 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 MZT2AQ6P582 158 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 TLDC1Q6P9B6 456 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 SARM1Q6SZW1 724 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 TEX261Q6UWH6 196 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 LDHAL6AQ6ZMR3 332 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 TPGS1Q6ZTW0 290 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 NIPA1Q7RTP0 329 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 APTXQ7Z2E3 356 aaKnown RBP-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 TMEM144Q7Z5S9 345 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 SLC35E3Q7Z769 313 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 ANKRD23Q86SG2 305 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 PPP1R3BQ86XI6 285 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 GUF1Q8N442 669 aaKnown RBP-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 ATP6V0D2Q8N8Y2 350 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 SREK1IP1Q8N9Q2 155 aaPredicted RBP-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 OR51S1Q8NGJ8 323 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 RAB3IL1Q8TBN0 382 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 METTL21AQ8WXB1 218 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 PIK3R3Q92569 461 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 PSMG2Q969U7 264 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 SYAP1Q96A49 352 aaPredicted RBP-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 DYNLL2Q96FJ2 89 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 SMIM10Q96HG1 83 aa-2.25□□□□□ -2.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms