RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 FOXRED1Q96CU9 486 aaPredicted RBP4.8□□□□□ -1.64
EPHA4-202ENST00000409854 ZNF486Q96H40 463 aaPredicted RBP4.8□□□□□ -1.64
EPHA4-202ENST00000409854 APC2O95996 2303 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 INTS1Q8N201 2190 aaKnown RBP4.79□□□□□ -1.64
EPHA4-202ENST00000409854 LDLRAD4O15165 306 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 FAM87AP0C7U9 286 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 EDN3P14138 238 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 ZNF20P17024 532 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 BDKRB2P30411 391 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 TNK1Q13470 666 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 OXA1LQ15070 435 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 P2RY14Q15391 338 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 GABRA6Q16445 453 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 BAK1Q16611 211 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 CD163Q86VB7 1156 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 OR5D14Q8NGL3 314 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 STARD4Q96DR4 205 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 POM121L2Q96KW2 1035 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 METTL17Q9H7H0 456 aaPredicted RBP4.79□□□□□ -1.64
EPHA4-202ENST00000409854 RNF121Q9H920 327 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 TMEM138Q9NPI0 162 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 DMXL2Q8TDJ6 3036 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 hCG_38984A0A1B0GV85 526 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 XRCC2O43543 280 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 S100A9P06702 114 aaKnown RBP4.79□□□□□ -1.64
EPHA4-202ENST00000409854 ERCC1P07992 297 aaPredicted RBP4.79□□□□□ -1.64
EPHA4-202ENST00000409854 CSF3P09919 207 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 IL7P13232 177 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 ABOP16442 354 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 RAB3AP20336 220 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 STOMP27105 288 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 PITPNBP48739 271 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 CLDN12P56749 244 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 RAB4BP61018 213 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 RAB1AP62820 205 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 TGFBR3Q03167 851 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 OR8B8Q15620 311 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 RAB11BQ15907 218 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 CARTPTQ16568 116 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 GSG1Q2KHT4 349 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 HIKESHIQ53FT3 197 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 GLYATL3Q5SZD4 288 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 C11orf88Q6PI97 169 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 CRIP3Q6Q6R5 217 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 UNQ6494/PRO21346Q6UXR6 183 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 CMTM4Q8IZR5 234 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 ZNF671Q8TAW3 534 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 SETD6Q8TBK2 473 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 RAB40AQ8WXH6 277 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 PP6455Q8WZ26 134 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 HAVCR1Q96D42 359 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 REEP6Q96HR9 211 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 FAM71F1Q96KD3 344 aaPredicted RBP4.79□□□□□ -1.64
EPHA4-202ENST00000409854 CHST5Q9GZS9 411 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 ZNF71Q9NQZ8 489 aaPredicted RBP4.79□□□□□ -1.64
EPHA4-202ENST00000409854 ABCB10Q9NRK6 738 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 DMRT1Q9Y5R6 373 aa4.79□□□□□ -1.64
EPHA4-202ENST00000409854 IGKV1-9A0A0C4DH69 117 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 A0A0G2JMP0 313 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 A0A0X1KG70 313 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 CTDSPLO15194 276 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 TPOP07202 933 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 TMIGD3P0DMS9 266 aaPredicted RBP4.78□□□□□ -1.64
EPHA4-202ENST00000409854 PRF1P14222 555 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 ZNF14P17017 642 aaPredicted RBP4.78□□□□□ -1.64
EPHA4-202ENST00000409854 HTR2CP28335 458 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 CAPZA1P52907 286 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 SPOCK1Q08629 439 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 IL18Q14116 193 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 ZBTB37Q5TC79 503 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 TMEM42Q69YG0 159 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 PYHIN1Q6K0P9 492 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 COMMD2Q86X83 199 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 C17orf78Q8N4C9 275 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 CNEP1R1Q8N9A8 125 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 NAXEQ8NCW5 288 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 OR4M2Q8NGB6 313 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 PTX4Q96A99 478 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 SORCS2Q96PQ0 1159 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 TP63Q9H3D4 680 aaPredicted RBP4.78□□□□□ -1.64
EPHA4-202ENST00000409854 NPAP1Q9NZP6 1156 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 FBLN5Q9UBX5 448 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 TBC1D24Q9ULP9 559 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 ANKRD11Q6UB99 2663 aaPredicted RBP4.78□□□□□ -1.64
EPHA4-202ENST00000409854 MGAQ8IWI9 3026 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 MYO7BQ6PIF6 2116 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 LOC100289279A0A1B0GTE1 492 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 J3QW42 95 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 NOS1APO75052 506 aaPredicted RBP4.78□□□□□ -1.64
EPHA4-202ENST00000409854 PTTG1O95997 202 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 LCATP04180 440 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 SERPINA5P05154 406 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 CD79AP11912 226 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 ACKR3P25106 362 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 AZGP1P25311 298 aaKnown RBP4.78□□□□□ -1.64
EPHA4-202ENST00000409854 PLA2G5P39877 138 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 QRFPP83859 136 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 FAM3AP98173 230 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 P2RY6Q15077 328 aa4.78□□□□□ -1.64
EPHA4-202ENST00000409854 MZT2BQ6NZ67 158 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms