RNA–Protein interactions for RNA: ENST00000409809.5

COL6A3-206, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-206ENST00000409809 A0A1B0GWA3 101 aa11.71□□□□□ -0.54
COL6A3-206ENST00000409809 SERTM2A0A1B0GWG4 89 aa11.71□□□□□ -0.54
COL6A3-206ENST00000409809 SLC35E2P0CK97 266 aa11.71□□□□□ -0.54
COL6A3-206ENST00000409809 SEMG2Q02383 582 aa11.71□□□□□ -0.54
COL6A3-206ENST00000409809 ZNF273Q14593 569 aa11.71□□□□□ -0.54
COL6A3-206ENST00000409809 IGSF8Q969P0 613 aa11.71□□□□□ -0.54
COL6A3-206ENST00000409809 HES1Q14469 280 aa11.71□□□□□ -0.54
COL6A3-206ENST00000409809 ZNF385BQ569K4 471 aa11.71□□□□□ -0.54
COL6A3-206ENST00000409809 C1orf220Q5T0J3 134 aa11.71□□□□□ -0.54
COL6A3-206ENST00000409809 DOLPP1Q86YN1 238 aa11.71□□□□□ -0.54
COL6A3-206ENST00000409809 WDR83Q9BRX9 315 aaKnown RBP11.71□□□□□ -0.54
COL6A3-206ENST00000409809 BOCQ9BWV1 1114 aa11.71□□□□□ -0.54
COL6A3-206ENST00000409809 PARP12Q9H0J9 701 aaKnown RBP11.71□□□□□ -0.54
COL6A3-206ENST00000409809 DOCK8Q8NF50 2099 aa11.71□□□□□ -0.54
COL6A3-206ENST00000409809 DIRC3C9JPN6 131 aa11.71□□□□□ -0.54
COL6A3-206ENST00000409809 XRCC2O43543 280 aa11.71□□□□□ -0.54
COL6A3-206ENST00000409809 DCTDP32321 178 aa11.71□□□□□ -0.54
COL6A3-206ENST00000409809 NKAIN2Q5VXU1 208 aa11.71□□□□□ -0.54
COL6A3-206ENST00000409809 C5AR2Q9P296 337 aa11.71□□□□□ -0.54
COL6A3-206ENST00000409809 DOT1LQ8TEK3 1739 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 LIPFP07098 398 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 PNLIPRP2P54317 469 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 FPGSQ05932 587 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 DUSP8Q13202 625 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 ST3GAL2Q16842 350 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 CD300LDQ6UXZ3 194 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 Q6ZPB1 254 aaPredicted RBP11.7□□□□□ -0.54
COL6A3-206ENST00000409809 TNFRSF13CQ96RJ3 184 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 DOCK2Q92608 1830 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 A0A1W2PNV4 684 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 OIT3Q8WWZ8 545 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 CST5P28325 142 aaPredicted RBP11.7□□□□□ -0.54
COL6A3-206ENST00000409809 HHEXQ03014 270 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 DUSP5Q16690 384 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 SAPCD1Q5SSQ6 148 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 PRSS45Q7RTY3 260 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 LRRC15Q8TF66 581 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 ERGIC1Q969X5 290 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 CSF3RQ99062 836 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 MED12Q93074 2177 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 DRGXA6NNA5 263 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 MRPL33O75394 65 aaKnown RBP11.7□□□□□ -0.54
COL6A3-206ENST00000409809 EMP3P54852 163 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 CLDN15P56746 228 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 OR2A5Q96R48 311 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 ADOQ96SZ5 270 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 COMMD5Q9GZQ3 224 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 PRSS50Q9UI38 385 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 MYLKQ15746 1914 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 HRO43593 1189 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 NLGN4XQ8N0W4 816 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 C11orf42Q8N5U0 333 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 GKN1Q9NS71 199 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 SPTA1P02549 2419 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 UBE2L5PA0A1B0GUS4 154 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 GAPDHP04406 335 aaKnown RBP11.7□□□□□ -0.54
COL6A3-206ENST00000409809 SCGB1A1P11684 91 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 MEOX1P50221 254 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 MPV17LQ2QL34 196 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 TAS2R4Q9NYW5 299 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 ANKRD61A6NGH8 418 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 C2orf27AQ580R0 203 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 LY6G5CQ5SRR4 150 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 OR10G8Q8NGN5 311 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 SAP30LQ9HAJ7 183 aa11.7□□□□□ -0.54
COL6A3-206ENST00000409809 SLCO2B1O94956 709 aa11.69□□□□□ -0.54
COL6A3-206ENST00000409809 VASPP50552 380 aaPredicted RBP11.69□□□□□ -0.54
COL6A3-206ENST00000409809 OR1C1Q15619 314 aa11.69□□□□□ -0.54
COL6A3-206ENST00000409809 HLA-DRB5Q30154 266 aa11.69□□□□□ -0.54
COL6A3-206ENST00000409809 LIPNQ5VXI9 398 aa11.69□□□□□ -0.54
COL6A3-206ENST00000409809 ZNF687Q8N1G0 1237 aa11.69□□□□□ -0.54
COL6A3-206ENST00000409809 STXBP6Q8NFX7 210 aa11.69□□□□□ -0.54
COL6A3-206ENST00000409809 UBE2ZQ9H832 354 aaPredicted RBP11.69□□□□□ -0.54
COL6A3-206ENST00000409809 ATG2BQ96BY7 2078 aa11.69□□□□□ -0.54
COL6A3-206ENST00000409809 ZNF816-ZNF321PA0A0X1KG74 233 aa11.69□□□□□ -0.54
COL6A3-206ENST00000409809 SCGB1D4Q6XE38 83 aa11.69□□□□□ -0.54
COL6A3-206ENST00000409809 C20orf27Q9GZN8 174 aa11.69□□□□□ -0.54
COL6A3-206ENST00000409809 PIPOXQ9P0Z9 390 aa11.69□□□□□ -0.54
COL6A3-206ENST00000409809 OPN4Q9UHM6 478 aa11.69□□□□□ -0.54
COL6A3-206ENST00000409809 AHCTF1Q8WYP5 2266 aa11.69□□□□□ -0.54
COL6A3-206ENST00000409809 PKD1L3Q7Z443 1732 aa11.69□□□□□ -0.54
COL6A3-206ENST00000409809 ALPK2Q86TB3 2170 aa11.69□□□□□ -0.54
COL6A3-206ENST00000409809 C7orf77A4D0Y5 90 aa11.69□□□□□ -0.54
COL6A3-206ENST00000409809 SEC11BP0C7V7 166 aa11.69□□□□□ -0.54
COL6A3-206ENST00000409809 SPNP16150 400 aa11.69□□□□□ -0.54
COL6A3-206ENST00000409809 BCL3P20749 454 aa11.69□□□□□ -0.54
COL6A3-206ENST00000409809 RIGQ13278 110 aa11.69□□□□□ -0.54
COL6A3-206ENST00000409809 ZNF468Q5VIY5 522 aaPredicted RBP11.69□□□□□ -0.54
COL6A3-206ENST00000409809 AMMECR1LQ6DCA0 310 aa11.69□□□□□ -0.54
COL6A3-206ENST00000409809 ZNF813Q6ZN06 617 aa11.69□□□□□ -0.54
COL6A3-206ENST00000409809 POM121L2Q96KW2 1035 aa11.69□□□□□ -0.54
COL6A3-206ENST00000409809 MAGT1Q9H0U3 335 aa11.69□□□□□ -0.54
COL6A3-206ENST00000409809 IGSF23A1L1A6 192 aa11.69□□□□□ -0.54
COL6A3-206ENST00000409809 CBR3O75828 277 aa11.69□□□□□ -0.54
COL6A3-206ENST00000409809 GPANK1O95872 356 aa11.69□□□□□ -0.54
COL6A3-206ENST00000409809 TGFBR1P36897 503 aa11.69□□□□□ -0.54
COL6A3-206ENST00000409809 JMJD6Q6NYC1 403 aaPredicted RBP11.69□□□□□ -0.54
COL6A3-206ENST00000409809 HMGN2P46Q86SG4 172 aa11.69□□□□□ -0.54
COL6A3-206ENST00000409809 MYPOPQ86VE0 399 aaPredicted RBP11.69□□□□□ -0.54
COL6A3-206ENST00000409809 TMEM255BQ8WV15 326 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms