RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 OR1M1Q8NGA1 313 aa12.22□□□□□ -0.45
CBX3-203ENST00000409747 LRRC29Q8WV35 223 aa12.22□□□□□ -0.45
CBX3-203ENST00000409747 C12orf43Q96C57 262 aaKnown RBP12.22□□□□□ -0.45
CBX3-203ENST00000409747 PGAM5Q96HS1 289 aa12.22□□□□□ -0.45
CBX3-203ENST00000409747 MICU1Q9BPX6 476 aa12.22□□□□□ -0.45
CBX3-203ENST00000409747 C1orf21Q9H246 121 aa12.22□□□□□ -0.45
CBX3-203ENST00000409747 ZNF556Q9HAH1 456 aa12.22□□□□□ -0.45
CBX3-203ENST00000409747 ZNF391Q9UJN7 358 aa12.22□□□□□ -0.45
CBX3-203ENST00000409747 MMP24Q9Y5R2 645 aa12.22□□□□□ -0.45
CBX3-203ENST00000409747 POMT1Q9Y6A1 747 aa12.22□□□□□ -0.45
CBX3-203ENST00000409747 PKD1L1Q8TDX9 2849 aa12.22□□□□□ -0.45
CBX3-203ENST00000409747 MGAM2Q2M2H8 2515 aa12.22□□□□□ -0.45
CBX3-203ENST00000409747 PRR23D1E9PI22 279 aaPredicted RBP12.21□□□□□ -0.45
CBX3-203ENST00000409747 PRODHO43272 600 aa12.21□□□□□ -0.45
CBX3-203ENST00000409747 LYNP07948 512 aa12.21□□□□□ -0.45
CBX3-203ENST00000409747 PRR23D2P0DMB1 279 aaPredicted RBP12.21□□□□□ -0.45
CBX3-203ENST00000409747 GSK3AP49840 483 aa12.21□□□□□ -0.45
CBX3-203ENST00000409747 RUSC1-AS1Q66K80 236 aa12.21□□□□□ -0.45
CBX3-203ENST00000409747 BTN2A1Q7KYR7 527 aa12.21□□□□□ -0.45
CBX3-203ENST00000409747 OTOSQ8NHW6 89 aa12.21□□□□□ -0.45
CBX3-203ENST00000409747 ST8SIA4Q92187 359 aa12.21□□□□□ -0.45
CBX3-203ENST00000409747 TBX15Q96SF7 602 aa12.21□□□□□ -0.45
CBX3-203ENST00000409747 RTL8AQ9BWD3 113 aa12.21□□□□□ -0.45
CBX3-203ENST00000409747 TEX12Q9BXU0 123 aa12.21□□□□□ -0.45
CBX3-203ENST00000409747 SIRPDQ9H106 197 aa12.21□□□□□ -0.45
CBX3-203ENST00000409747 OR51V1Q9H2C8 321 aa12.21□□□□□ -0.45
CBX3-203ENST00000409747 ACOXLQ9NUZ1 547 aa12.21□□□□□ -0.45
CBX3-203ENST00000409747 MPC1Q9Y5U8 109 aa12.21□□□□□ -0.45
CBX3-203ENST00000409747 MEGF8Q7Z7M0 2845 aa12.21□□□□□ -0.45
CBX3-203ENST00000409747 CENPVL3A0A0U1RRI6 287 aa12.2□□□□□ -0.46
CBX3-203ENST00000409747 AQP12BA6NM10 295 aa12.2□□□□□ -0.46
CBX3-203ENST00000409747 GPR37O15354 613 aa12.2□□□□□ -0.46
CBX3-203ENST00000409747 HMGN1P05114 100 aa12.2□□□□□ -0.46
CBX3-203ENST00000409747 POU1F1P28069 291 aa12.2□□□□□ -0.46
CBX3-203ENST00000409747 RPL15P61313 204 aaKnown RBP12.2□□□□□ -0.46
CBX3-203ENST00000409747 WDR82Q6UXN9 313 aa12.2□□□□□ -0.46
CBX3-203ENST00000409747 WDR86Q86TI4 376 aa12.2□□□□□ -0.46
CBX3-203ENST00000409747 AQP12AQ8IXF9 295 aa12.2□□□□□ -0.46
CBX3-203ENST00000409747 ADGRG5Q8IZF4 528 aa12.2□□□□□ -0.46
CBX3-203ENST00000409747 GALNT4Q8N4A0 578 aa12.2□□□□□ -0.46
CBX3-203ENST00000409747 OR4F5Q8NH21 305 aa12.2□□□□□ -0.46
CBX3-203ENST00000409747 SSMEM1Q8WWF3 244 aa12.2□□□□□ -0.46
CBX3-203ENST00000409747 DMRTB1Q96MA1 342 aa12.2□□□□□ -0.46
CBX3-203ENST00000409747 TLNRD1Q9H1K6 362 aa12.2□□□□□ -0.46
CBX3-203ENST00000409747 NIPAL2Q9H841 368 aa12.2□□□□□ -0.46
CBX3-203ENST00000409747 BRD7Q9NPI1 651 aa12.2□□□□□ -0.46
CBX3-203ENST00000409747 PDP1Q9P0J1 537 aaPredicted RBP12.2□□□□□ -0.46
CBX3-203ENST00000409747 RPUSD1Q9UJJ7 312 aaKnown RBP12.2□□□□□ -0.46
CBX3-203ENST00000409747 KPTNQ9Y664 436 aa12.2□□□□□ -0.46
CBX3-203ENST00000409747 IGHV3OR15-7A0A075B7D8 119 aa12.2□□□□□ -0.46
CBX3-203ENST00000409747 IGHV1-69DA0A0B4J2H0 117 aa12.2□□□□□ -0.46
CBX3-203ENST00000409747 TMEM210A6NLX4 147 aa12.2□□□□□ -0.46
CBX3-203ENST00000409747 E2F6O75461 281 aa12.2□□□□□ -0.46
CBX3-203ENST00000409747 IGHV1-69P01742 117 aa12.2□□□□□ -0.46
CBX3-203ENST00000409747 MELTFP08582 738 aa12.2□□□□□ -0.46
CBX3-203ENST00000409747 MDKP21741 143 aaPredicted RBP12.2□□□□□ -0.46
CBX3-203ENST00000409747 PLBD1Q6P4A8 553 aa12.2□□□□□ -0.46
CBX3-203ENST00000409747 C11orf53Q8IXP5 236 aa12.2□□□□□ -0.46
CBX3-203ENST00000409747 TBC1D15Q8TC07 691 aa12.2□□□□□ -0.46
CBX3-203ENST00000409747 THEM6Q8WUY1 208 aa12.2□□□□□ -0.46
CBX3-203ENST00000409747 RASSF4Q9H2L5 321 aa12.2□□□□□ -0.46
CBX3-203ENST00000409747 YY1AP1Q9H869 796 aa12.2□□□□□ -0.46
CBX3-203ENST00000409747 CNTD2Q9H8S5 307 aa12.2□□□□□ -0.46
CBX3-203ENST00000409747 BEX1Q9HBH7 125 aa12.2□□□□□ -0.46
CBX3-203ENST00000409747 RHBDD3Q9Y3P4 386 aa12.2□□□□□ -0.46
CBX3-203ENST00000409747 A0A1B0GVI7 797 aa12.19□□□□□ -0.46
CBX3-203ENST00000409747 FAM181BA6NEQ2 426 aa12.19□□□□□ -0.46
CBX3-203ENST00000409747 ACOT8O14734 319 aa12.19□□□□□ -0.46
CBX3-203ENST00000409747 T-ENOLP0DO92 83 aa12.19□□□□□ -0.46
CBX3-203ENST00000409747 OSMP13725 252 aa12.19□□□□□ -0.46
CBX3-203ENST00000409747 RAG2P55895 527 aa12.19□□□□□ -0.46
CBX3-203ENST00000409747 PSMA6P60900 246 aaKnown RBP12.19□□□□□ -0.46
CBX3-203ENST00000409747 ARF6P62330 175 aa12.19□□□□□ -0.46
CBX3-203ENST00000409747 CSNK2BP67870 215 aa12.19□□□□□ -0.46
CBX3-203ENST00000409747 GINS1Q14691 196 aa12.19□□□□□ -0.46
CBX3-203ENST00000409747 CDONQ4KMG0 1287 aa12.19□□□□□ -0.46
CBX3-203ENST00000409747 KLHL12Q53G59 568 aa12.19□□□□□ -0.46
CBX3-203ENST00000409747 WDR38Q5JTN6 314 aa12.19□□□□□ -0.46
CBX3-203ENST00000409747 SLC35D3Q5M8T2 416 aa12.19□□□□□ -0.46
CBX3-203ENST00000409747 FIP1L1Q6UN15 594 aaKnown RBP12.19□□□□□ -0.46
CBX3-203ENST00000409747 CMTM4Q8IZR5 234 aa12.19□□□□□ -0.46
CBX3-203ENST00000409747 SCCPDHQ8NBX0 429 aa12.19□□□□□ -0.46
CBX3-203ENST00000409747 OR10Z1Q8NGY1 313 aa12.19□□□□□ -0.46
CBX3-203ENST00000409747 LHX4Q969G2 390 aa12.19□□□□□ -0.46
CBX3-203ENST00000409747 ITPKCQ96DU7 683 aa12.19□□□□□ -0.46
CBX3-203ENST00000409747 AMELYQ99218 206 aa12.19□□□□□ -0.46
CBX3-203ENST00000409747 THTPAQ9BU02 230 aa12.19□□□□□ -0.46
CBX3-203ENST00000409747 DNTTIP1Q9H147 329 aa12.19□□□□□ -0.46
CBX3-203ENST00000409747 TAS2R1Q9NYW7 299 aa12.19□□□□□ -0.46
CBX3-203ENST00000409747 TRRAPQ9Y4A5 3859 aa12.19□□□□□ -0.46
CBX3-203ENST00000409747 NKX6-3A6NJ46 265 aa12.18□□□□□ -0.46
CBX3-203ENST00000409747 CDIPTO14735 213 aa12.18□□□□□ -0.46
CBX3-203ENST00000409747 NDUFB3O43676 98 aa12.18□□□□□ -0.46
CBX3-203ENST00000409747 SELENOFO60613 162 aa12.18□□□□□ -0.46
CBX3-203ENST00000409747 KNG1P01042 644 aa12.18□□□□□ -0.46
CBX3-203ENST00000409747 POU4F2Q12837 409 aa12.18□□□□□ -0.46
CBX3-203ENST00000409747 LRRC10Q5BKY1 277 aa12.18□□□□□ -0.46
CBX3-203ENST00000409747 KIR3DL3Q8N743 410 aa12.18□□□□□ -0.46
CBX3-203ENST00000409747 CANT1Q8WVQ1 401 aa12.18□□□□□ -0.46
CBX3-203ENST00000409747 ITFG2Q969R8 447 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms