RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 MSMBP08118 114 aa26.18■■□□□ 1.78
TRAF3IP1-203ENST00000409739 DBTP11182 482 aaKnown RBP26.18■■□□□ 1.78
TRAF3IP1-203ENST00000409739 GNALP38405 381 aa26.18■■□□□ 1.78
TRAF3IP1-203ENST00000409739 MDH2P40926 338 aaKnown RBP26.18■■□□□ 1.78
TRAF3IP1-203ENST00000409739 DVL1P1P54792 670 aaPredicted RBP26.18■■□□□ 1.78
TRAF3IP1-203ENST00000409739 ACTC1P68032 377 aa26.18■■□□□ 1.78
TRAF3IP1-203ENST00000409739 ACTA1P68133 377 aa26.18■■□□□ 1.78
TRAF3IP1-203ENST00000409739 MZT1Q08AG7 82 aa26.18■■□□□ 1.78
TRAF3IP1-203ENST00000409739 OGFRL1Q5TC84 451 aaPredicted RBP26.18■■□□□ 1.78
TRAF3IP1-203ENST00000409739 LIPNQ5VXI9 398 aa26.18■■□□□ 1.78
TRAF3IP1-203ENST00000409739 C1orf87Q8N0U7 546 aa26.18■■□□□ 1.78
TRAF3IP1-203ENST00000409739 SPICQ8N5J4 248 aa26.18■■□□□ 1.78
TRAF3IP1-203ENST00000409739 OR11L1Q8NGX0 322 aa26.18■■□□□ 1.78
TRAF3IP1-203ENST00000409739 FAM71F1Q96KD3 344 aaPredicted RBP26.18■■□□□ 1.78
TRAF3IP1-203ENST00000409739 Q96MT0 163 aa26.18■■□□□ 1.78
TRAF3IP1-203ENST00000409739 C14orf119Q9NWQ9 140 aa26.18■■□□□ 1.78
TRAF3IP1-203ENST00000409739 SNX5Q9Y5X3 404 aa26.18■■□□□ 1.78
TRAF3IP1-203ENST00000409739 ZNF205O95201 554 aa26.17■■□□□ 1.78
TRAF3IP1-203ENST00000409739 CST4P01036 141 aa26.17■■□□□ 1.78
TRAF3IP1-203ENST00000409739 IRF2P14316 349 aa26.17■■□□□ 1.78
TRAF3IP1-203ENST00000409739 FAM201AQ5SY85 155 aa26.17■■□□□ 1.78
TRAF3IP1-203ENST00000409739 WDR86Q86TI4 376 aa26.17■■□□□ 1.78
TRAF3IP1-203ENST00000409739 ELMOD2Q8IZ81 293 aa26.17■■□□□ 1.78
TRAF3IP1-203ENST00000409739 OR51F2Q8NH61 342 aa26.17■■□□□ 1.78
TRAF3IP1-203ENST00000409739 LGALS12Q96DT0 336 aa26.17■■□□□ 1.78
TRAF3IP1-203ENST00000409739 ITPKCQ96DU7 683 aa26.17■■□□□ 1.78
TRAF3IP1-203ENST00000409739 DCLRE1BQ9H816 532 aa26.17■■□□□ 1.78
TRAF3IP1-203ENST00000409739 EXOGQ9Y2C4 368 aaKnown RBP26.17■■□□□ 1.78
TRAF3IP1-203ENST00000409739 SVEP1Q4LDE5 3571 aa26.17■■□□□ 1.78
TRAF3IP1-203ENST00000409739 JMJD1CQ15652 2540 aa26.17■■□□□ 1.78
TRAF3IP1-203ENST00000409739 GRPP07492 148 aa26.16■■□□□ 1.78
TRAF3IP1-203ENST00000409739 MAP2K3P46734 347 aa26.16■■□□□ 1.78
TRAF3IP1-203ENST00000409739 ISL1P61371 349 aa26.16■■□□□ 1.78
TRAF3IP1-203ENST00000409739 PRDX4Q13162 271 aa26.16■■□□□ 1.78
TRAF3IP1-203ENST00000409739 GLCCI1Q86VQ1 547 aa26.16■■□□□ 1.78
TRAF3IP1-203ENST00000409739 MUC20Q8N307 709 aaPredicted RBP26.16■■□□□ 1.78
TRAF3IP1-203ENST00000409739 KLHL36Q8N4N3 616 aa26.16■■□□□ 1.78
TRAF3IP1-203ENST00000409739 MPC1Q9Y5U8 109 aa26.16■■□□□ 1.78
TRAF3IP1-203ENST00000409739 ZNF850A8MQ14 1090 aa26.15■■□□□ 1.78
TRAF3IP1-203ENST00000409739 CLIC3O95833 236 aa26.15■■□□□ 1.78
TRAF3IP1-203ENST00000409739 ATP6V1B1P15313 513 aa26.15■■□□□ 1.78
TRAF3IP1-203ENST00000409739 TP53I3Q53FA7 332 aa26.15■■□□□ 1.78
TRAF3IP1-203ENST00000409739 ZNF691Q5VV52 312 aa26.15■■□□□ 1.78
TRAF3IP1-203ENST00000409739 CATSPERDQ86XM0 798 aa26.15■■□□□ 1.78
TRAF3IP1-203ENST00000409739 CYGBQ8WWM9 190 aa26.15■■□□□ 1.78
TRAF3IP1-203ENST00000409739 RORBQ92753 470 aa26.15■■□□□ 1.78
TRAF3IP1-203ENST00000409739 ITFG2Q969R8 447 aa26.15■■□□□ 1.78
TRAF3IP1-203ENST00000409739 TMEM186Q96B77 213 aa26.15■■□□□ 1.78
TRAF3IP1-203ENST00000409739 AMBNQ9NP70 447 aa26.15■■□□□ 1.78
TRAF3IP1-203ENST00000409739 ABCB9Q9NP78 766 aa26.15■■□□□ 1.78
TRAF3IP1-203ENST00000409739 ACOXLQ9NUZ1 547 aa26.15■■□□□ 1.78
TRAF3IP1-203ENST00000409739 GNG8Q9UK08 70 aa26.15■■□□□ 1.78
TRAF3IP1-203ENST00000409739 CDC42EP3Q9UKI2 254 aa26.15■■□□□ 1.78
TRAF3IP1-203ENST00000409739 PCDHB10Q9UN67 800 aa26.15■■□□□ 1.78
TRAF3IP1-203ENST00000409739 SLC22A13Q9Y226 551 aa26.15■■□□□ 1.78
TRAF3IP1-203ENST00000409739 ZNF816-ZNF321PA0A0X1KG74 233 aa26.14■■□□□ 1.78
TRAF3IP1-203ENST00000409739 A6NLC8 198 aa26.14■■□□□ 1.78
TRAF3IP1-203ENST00000409739 ANXA2P2A6NMY6 339 aa26.14■■□□□ 1.78
TRAF3IP1-203ENST00000409739 HOXA4Q00056 320 aaPredicted RBP26.14■■□□□ 1.78
TRAF3IP1-203ENST00000409739 IL5RAQ01344 420 aa26.14■■□□□ 1.78
TRAF3IP1-203ENST00000409739 CHRFAM7AQ494W8 412 aa26.14■■□□□ 1.78
TRAF3IP1-203ENST00000409739 KRT74Q7RTS7 529 aa26.14■■□□□ 1.78
TRAF3IP1-203ENST00000409739 FAM220AQ7Z4H9 259 aa26.14■■□□□ 1.78
TRAF3IP1-203ENST00000409739 SEMA6DQ8NFY4 1073 aa26.14■■□□□ 1.78
TRAF3IP1-203ENST00000409739 PIGCQ92535 297 aa26.14■■□□□ 1.78
TRAF3IP1-203ENST00000409739 PATZ1Q9HBE1 687 aaKnown RBP26.14■■□□□ 1.78
TRAF3IP1-203ENST00000409739 C1orf123Q9NWV4 160 aa26.14■■□□□ 1.78
TRAF3IP1-203ENST00000409739 RNF7Q9UBF6 113 aa26.14■■□□□ 1.78
TRAF3IP1-203ENST00000409739 NKX1-2Q9UD57 310 aaPredicted RBP26.14■■□□□ 1.78
TRAF3IP1-203ENST00000409739 PCDHGB1Q9Y5G3 927 aa26.14■■□□□ 1.78
TRAF3IP1-203ENST00000409739 PPIAL4EA0A075B759 164 aa26.13■■□□□ 1.77
TRAF3IP1-203ENST00000409739 DAPL1A0PJW8 107 aa26.13■■□□□ 1.77
TRAF3IP1-203ENST00000409739 CEACAM18A8MTB9 384 aa26.13■■□□□ 1.77
TRAF3IP1-203ENST00000409739 PPIAL4DF5H284 164 aa26.13■■□□□ 1.77
TRAF3IP1-203ENST00000409739 WBP4O75554 376 aaKnown RBP26.13■■□□□ 1.77
TRAF3IP1-203ENST00000409739 DHRS3O75911 302 aa26.13■■□□□ 1.77
TRAF3IP1-203ENST00000409739 FSTL3O95633 263 aa26.13■■□□□ 1.77
TRAF3IP1-203ENST00000409739 PPIAL4FP0DN26 164 aa26.13■■□□□ 1.77
TRAF3IP1-203ENST00000409739 ZNF154Q13106 437 aa26.13■■□□□ 1.77
TRAF3IP1-203ENST00000409739 CR1LQ2VPA4 569 aa26.13■■□□□ 1.77
TRAF3IP1-203ENST00000409739 CDONQ4KMG0 1287 aa26.13■■□□□ 1.77
TRAF3IP1-203ENST00000409739 FAM120AOSQ5T036 256 aa26.13■■□□□ 1.77
TRAF3IP1-203ENST00000409739 ZNF826PQ6ZT77 177 aa26.13■■□□□ 1.77
TRAF3IP1-203ENST00000409739 ZDHHC23Q8IYP9 409 aa26.13■■□□□ 1.77
TRAF3IP1-203ENST00000409739 ACBD7Q8N6N7 88 aa26.13■■□□□ 1.77
TRAF3IP1-203ENST00000409739 OR1M1Q8NGA1 313 aa26.13■■□□□ 1.77
TRAF3IP1-203ENST00000409739 HPSE2Q8WWQ2 592 aa26.13■■□□□ 1.77
TRAF3IP1-203ENST00000409739 MICU1Q9BPX6 476 aa26.13■■□□□ 1.77
TRAF3IP1-203ENST00000409739 FGF23Q9GZV9 251 aaPredicted RBP26.13■■□□□ 1.77
TRAF3IP1-203ENST00000409739 TMEM165Q9HC07 324 aa26.13■■□□□ 1.77
TRAF3IP1-203ENST00000409739 HIF1ANQ9NWT6 349 aa26.13■■□□□ 1.77
TRAF3IP1-203ENST00000409739 PPIAL4AQ9Y536 164 aa26.13■■□□□ 1.77
TRAF3IP1-203ENST00000409739 F5H0A9 414 aaPredicted RBP26.12■■□□□ 1.77
TRAF3IP1-203ENST00000409739 P2RY10O00398 339 aa26.12■■□□□ 1.77
TRAF3IP1-203ENST00000409739 PLPP2O43688 288 aa26.12■■□□□ 1.77
TRAF3IP1-203ENST00000409739 ADARB1P78563 741 aaKnown RBP26.12■■□□□ 1.77
TRAF3IP1-203ENST00000409739 RIPPLY1Q0D2K3 151 aa26.12■■□□□ 1.77
TRAF3IP1-203ENST00000409739 ZNF404Q494X3 552 aa26.12■■□□□ 1.77
TRAF3IP1-203ENST00000409739 TTC23Q5W5X9 447 aa26.12■■□□□ 1.77
TRAF3IP1-203ENST00000409739 DHRSXQ8N5I4 330 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms