RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 OR51B6Q9H340 312 aa12.15□□□□□ -0.46
GPNMB-203ENST00000409458 MYEF2Q9P2K5 600 aaKnown RBP12.15□□□□□ -0.46
GPNMB-203ENST00000409458 DSPP15924 2871 aaKnown RBP12.14□□□□□ -0.47
GPNMB-203ENST00000409458 TLN1Q9Y490 2541 aaKnown RBP12.14□□□□□ -0.47
GPNMB-203ENST00000409458 MAGEB3O15480 346 aa12.14□□□□□ -0.47
GPNMB-203ENST00000409458 CTAG2O75638 210 aa12.14□□□□□ -0.47
GPNMB-203ENST00000409458 ALX3O95076 343 aa12.14□□□□□ -0.47
GPNMB-203ENST00000409458 IGKV3-15P01624 115 aa12.14□□□□□ -0.47
GPNMB-203ENST00000409458 OCMP0CE72 109 aaPredicted RBP12.14□□□□□ -0.47
GPNMB-203ENST00000409458 CBR1P16152 277 aa12.14□□□□□ -0.47
GPNMB-203ENST00000409458 CDK2P24941 298 aa12.14□□□□□ -0.47
GPNMB-203ENST00000409458 OPRM1P35372 400 aa12.14□□□□□ -0.47
GPNMB-203ENST00000409458 NR4A2P43354 598 aa12.14□□□□□ -0.47
GPNMB-203ENST00000409458 MALLQ13021 153 aa12.14□□□□□ -0.47
GPNMB-203ENST00000409458 BAIAP2L2Q6UXY1 529 aa12.14□□□□□ -0.47
GPNMB-203ENST00000409458 DCDC5Q6ZRR9 648 aa12.14□□□□□ -0.47
GPNMB-203ENST00000409458 MRPL21Q7Z2W9 205 aaKnown RBP12.14□□□□□ -0.47
GPNMB-203ENST00000409458 POC5Q8NA72 575 aa12.14□□□□□ -0.47
GPNMB-203ENST00000409458 UBASH3BQ8TF42 649 aa12.14□□□□□ -0.47
GPNMB-203ENST00000409458 RFT1Q96AA3 541 aa12.14□□□□□ -0.47
GPNMB-203ENST00000409458 REPIN1Q9BWE0 567 aaKnown RBP12.14□□□□□ -0.47
GPNMB-203ENST00000409458 ZNF816-ZNF321PA0A0X1KG74 233 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 OR5H1A6NKK0 313 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 EEF1E1-BLOC1S5C9J1V9 151 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 EEF1E1O43324 174 aaKnown RBP12.13□□□□□ -0.47
GPNMB-203ENST00000409458 GMDSO60547 372 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 HLA-DQB1P01920 261 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 IL32P24001 234 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 LY6DQ14210 128 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 OXA1LQ15070 435 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 TMEM69Q5SWH9 247 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 CLVS2Q5SYC1 327 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 AWAT2Q6E213 333 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 OR10K2Q6IF99 312 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 CDH26Q8IXH8 852 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 OR56B2PQ8NGI1 322 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 S100A16Q96FQ6 103 aaKnown RBP12.13□□□□□ -0.47
GPNMB-203ENST00000409458 CDH20Q9HBT6 801 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 OBP2BQ9NPH6 170 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 CRIM1Q9NZV1 1036 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 MRPS7Q9Y2R9 242 aaKnown RBP12.13□□□□□ -0.47
GPNMB-203ENST00000409458 MSTNO14793 375 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 LANCL1O43813 399 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 SMPD2O60906 423 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 KDM4BO94953 1096 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 BPNT1O95861 308 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 PTH2RP49190 550 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 QRFPP83859 136 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 UNC119Q13432 240 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 CNN3Q15417 329 aaKnown RBP12.13□□□□□ -0.47
GPNMB-203ENST00000409458 KISS1Q15726 138 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 RNASE12Q5GAN4 147 aaKnown RBP12.13□□□□□ -0.47
GPNMB-203ENST00000409458 TRIQKQ629K1 86 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 Q6ZNX1 250 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 ANGPTL5Q86XS5 388 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 OR5D18Q8NGL1 313 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 GCDHQ92947 438 aaPredicted RBP12.13□□□□□ -0.47
GPNMB-203ENST00000409458 TRIM63Q969Q1 353 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 S100PBPQ96BU1 408 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 GPER1Q99527 375 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 PIGMQ9H3S5 423 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 TBCCD1Q9NVR7 557 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 MRPS28Q9Y2Q9 187 aaKnown RBP12.13□□□□□ -0.47
GPNMB-203ENST00000409458 AMDHD2Q9Y303 409 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 SLC25A15Q9Y619 301 aa12.13□□□□□ -0.47
GPNMB-203ENST00000409458 LINC00854A0A1B0GVQ3 168 aa12.12□□□□□ -0.47
GPNMB-203ENST00000409458 A8MXE2 369 aa12.12□□□□□ -0.47
GPNMB-203ENST00000409458 ICMTO60725 284 aa12.12□□□□□ -0.47
GPNMB-203ENST00000409458 NRASP01111 189 aa12.12□□□□□ -0.47
GPNMB-203ENST00000409458 IGLV1-44P01699 117 aa12.12□□□□□ -0.47
GPNMB-203ENST00000409458 FAM157BP0CG42 384 aa12.12□□□□□ -0.47
GPNMB-203ENST00000409458 VSIG8P0DPA2 414 aa12.12□□□□□ -0.47
GPNMB-203ENST00000409458 CAPZA1P52907 286 aa12.12□□□□□ -0.47
GPNMB-203ENST00000409458 TAS2R20P59543 309 aa12.12□□□□□ -0.47
GPNMB-203ENST00000409458 DEFA1P59665 94 aa12.12□□□□□ -0.47
GPNMB-203ENST00000409458 DEFA3P59666 94 aa12.12□□□□□ -0.47
GPNMB-203ENST00000409458 DGCR2P98153 550 aa12.12□□□□□ -0.47
GPNMB-203ENST00000409458 PITPNAQ00169 270 aa12.12□□□□□ -0.47
GPNMB-203ENST00000409458 SCN1BQ07699 218 aa12.12□□□□□ -0.47
GPNMB-203ENST00000409458 TRIM16LQ309B1 348 aa12.12□□□□□ -0.47
GPNMB-203ENST00000409458 SPATA46Q5T0L3 261 aa12.12□□□□□ -0.47
GPNMB-203ENST00000409458 ZBTB37Q5TC79 503 aa12.12□□□□□ -0.47
GPNMB-203ENST00000409458 GLIPR1L1Q6UWM5 242 aa12.12□□□□□ -0.47
GPNMB-203ENST00000409458 LIX1LQ8IVB5 337 aa12.12□□□□□ -0.47
GPNMB-203ENST00000409458 RELL2Q8NC24 303 aaPredicted RBP12.12□□□□□ -0.47
GPNMB-203ENST00000409458 PIGCQ92535 297 aa12.12□□□□□ -0.47
GPNMB-203ENST00000409458 SPSB1Q96BD6 273 aa12.12□□□□□ -0.47
GPNMB-203ENST00000409458 C1orf147Q96MC9 270 aaPredicted RBP12.12□□□□□ -0.47
GPNMB-203ENST00000409458 GAL3ST1Q99999 423 aa12.12□□□□□ -0.47
GPNMB-203ENST00000409458 OPA3Q9H6K4 179 aa12.12□□□□□ -0.47
GPNMB-203ENST00000409458 AUNIPQ9H7T9 357 aa12.12□□□□□ -0.47
GPNMB-203ENST00000409458 KCNN3Q9UGI6 736 aa12.12□□□□□ -0.47
GPNMB-203ENST00000409458 GPR160Q9UJ42 338 aa12.12□□□□□ -0.47
GPNMB-203ENST00000409458 SHANK1Q9Y566 2161 aa12.11□□□□□ -0.47
GPNMB-203ENST00000409458 IGHV1-18A0A0C4DH31 117 aa12.11□□□□□ -0.47
GPNMB-203ENST00000409458 GGT3PA6NGU5 568 aa12.11□□□□□ -0.47
GPNMB-203ENST00000409458 CTDSPLO15194 276 aa12.11□□□□□ -0.47
GPNMB-203ENST00000409458 SSX4O60224 188 aa12.11□□□□□ -0.47
GPNMB-203ENST00000409458 CECR9P0C854 216 aa12.11□□□□□ -0.47
GPNMB-203ENST00000409458 RAB6AP20340 208 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms