RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 ZADH2Q8N4Q0 377 aa5.47□□□□□ -1.53
GTF3C3-202ENST00000409364 TMEM229BQ8NBD8 167 aa5.47□□□□□ -1.53
GTF3C3-202ENST00000409364 SSC4DQ8WTU2 575 aa5.47□□□□□ -1.53
GTF3C3-202ENST00000409364 AKAP1Q92667 903 aaKnown RBP eCLIP5.47□□□□□ -1.53
GTF3C3-202ENST00000409364 GCDHQ92947 438 aaPredicted RBP5.47□□□□□ -1.53
GTF3C3-202ENST00000409364 SEH1LQ96EE3 360 aa5.47□□□□□ -1.53
GTF3C3-202ENST00000409364 REEP6Q96HR9 211 aa5.47□□□□□ -1.53
GTF3C3-202ENST00000409364 GMPPAQ96IJ6 420 aaPredicted RBP5.47□□□□□ -1.53
GTF3C3-202ENST00000409364 S100A13Q99584 98 aa5.47□□□□□ -1.53
GTF3C3-202ENST00000409364 SOX7Q9BT81 388 aa5.47□□□□□ -1.53
GTF3C3-202ENST00000409364 URM1Q9BTM9 101 aaKnown RBP5.47□□□□□ -1.53
GTF3C3-202ENST00000409364 C1QTNF5Q9BXJ0 243 aa5.47□□□□□ -1.53
GTF3C3-202ENST00000409364 CHST5Q9GZS9 411 aa5.47□□□□□ -1.53
GTF3C3-202ENST00000409364 PRDM14Q9GZV8 571 aa5.47□□□□□ -1.53
GTF3C3-202ENST00000409364 MED28Q9H204 178 aa5.47□□□□□ -1.53
GTF3C3-202ENST00000409364 GHITMQ9H3K2 345 aa5.47□□□□□ -1.53
GTF3C3-202ENST00000409364 NOX3Q9HBY0 568 aa5.47□□□□□ -1.53
GTF3C3-202ENST00000409364 MCUBQ9NWR8 336 aa5.47□□□□□ -1.53
GTF3C3-202ENST00000409364 MRPL15Q9P015 296 aaKnown RBP5.47□□□□□ -1.53
GTF3C3-202ENST00000409364 KCNMB2Q9Y691 235 aa5.47□□□□□ -1.53
GTF3C3-202ENST00000409364 GVINP1Q7Z2Y8 2422 aa5.47□□□□□ -1.53
GTF3C3-202ENST00000409364 FAM186AA6NE01 2351 aa5.46□□□□□ -1.53
GTF3C3-202ENST00000409364 PTPRZ1P23471 2315 aaPredicted RBP5.46□□□□□ -1.53
GTF3C3-202ENST00000409364 PHF3Q92576 2039 aaKnown RBP5.46□□□□□ -1.53
GTF3C3-202ENST00000409364 IGKV1-9A0A0C4DH69 117 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 C5orf63A6NC05 138 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 AQP7O14520 342 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 PAX4O43316 350 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 XRCC2O43543 280 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 GMDSO60547 372 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 NDUFB6O95139 128 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 PATE4P0C8F1 98 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 NAT2P11245 290 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 GTF2F2P13984 249 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 FAHP16930 419 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 STOMP27105 288 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 MPGP29372 298 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 TAS2R19P59542 299 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 PLP2Q04941 152 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 FAPQ12884 760 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 SRSF6Q13247 344 aaKnown RBP5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 ARL6IP1Q15041 203 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 UBE2V2Q15819 145 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 GSG1Q2KHT4 349 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 SNAI3Q3KNW1 292 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 ZNF260Q3ZCT1 412 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 ZFP69Q49AA0 526 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 ZBTB37Q5TC79 503 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 FBXW9Q5XUX1 488 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 STEAP1BQ6NZ63 245 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 TMEM53Q6P2H8 277 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 IGFL3Q6UXB1 125 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 COLCA1Q6ZS62 124 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 NUFIP2Q7Z417 695 aaKnown RBP5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 P4HA3Q7Z4N8 544 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 FGD2Q7Z6J4 655 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 TCTE3Q8IZS6 198 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 ZBTB8BQ8NAP8 495 aaPredicted RBP5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 CHST4Q8NCG5 386 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 OR56B1Q8NGI3 324 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 OR10R2Q8NGX6 335 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 FGFBP3Q8TAT2 258 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 AQP3Q92482 292 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 SPSB1Q96BD6 273 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 SARAFQ96BY9 339 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 NKX3-1Q99801 234 aaPredicted RBP5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 TRAF4Q9BUZ4 470 aaPredicted RBP5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 CST11Q9H112 138 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 TP63Q9H3D4 680 aaPredicted RBP5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 KCNK15Q9H427 330 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 ZNF224Q9NZL3 707 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 MYEF2Q9P2K5 600 aaKnown RBP5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 SPRR3Q9UBC9 169 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 LIPGQ9Y5X9 500 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 MED13Q9UHV7 2174 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 ZNF292O60281 2723 aa5.46□□□□□ -1.54
GTF3C3-202ENST00000409364 ICMTO60725 284 aa5.45□□□□□ -1.54
GTF3C3-202ENST00000409364 TGM6O95932 706 aa5.45□□□□□ -1.54
GTF3C3-202ENST00000409364 CYB5AP00167 134 aa5.45□□□□□ -1.54
GTF3C3-202ENST00000409364 IL5P05113 134 aa5.45□□□□□ -1.54
GTF3C3-202ENST00000409364 SERPINA5P05154 406 aa5.45□□□□□ -1.54
GTF3C3-202ENST00000409364 GSTP1P09211 210 aaKnown RBP5.45□□□□□ -1.54
GTF3C3-202ENST00000409364 OR3A2P47893 321 aa5.45□□□□□ -1.54
GTF3C3-202ENST00000409364 VEGFCP49767 419 aa5.45□□□□□ -1.54
GTF3C3-202ENST00000409364 MECP2P51608 486 aaKnown RBP5.45□□□□□ -1.54
GTF3C3-202ENST00000409364 RAB1AP62820 205 aa5.45□□□□□ -1.54
GTF3C3-202ENST00000409364 CD83Q01151 205 aa5.45□□□□□ -1.54
GTF3C3-202ENST00000409364 TGFBR3Q03167 851 aa5.45□□□□□ -1.54
GTF3C3-202ENST00000409364 MAB21L1Q13394 359 aa5.45□□□□□ -1.54
GTF3C3-202ENST00000409364 UNC119Q13432 240 aa5.45□□□□□ -1.54
GTF3C3-202ENST00000409364 CNN3Q15417 329 aaKnown RBP5.45□□□□□ -1.54
GTF3C3-202ENST00000409364 SF3B4Q15427 424 aaKnown RBP eCLIP5.45□□□□□ -1.54
GTF3C3-202ENST00000409364 KCNJ8Q15842 424 aa5.45□□□□□ -1.54
GTF3C3-202ENST00000409364 C3AR1Q16581 482 aa5.45□□□□□ -1.54
GTF3C3-202ENST00000409364 CLVS2Q5SYC1 327 aa5.45□□□□□ -1.54
GTF3C3-202ENST00000409364 METTL11BQ5VVY1 283 aa5.45□□□□□ -1.54
GTF3C3-202ENST00000409364 CD276Q5ZPR3 534 aa5.45□□□□□ -1.54
GTF3C3-202ENST00000409364 ZNF782Q6ZMW2 699 aaPredicted RBP5.45□□□□□ -1.54
GTF3C3-202ENST00000409364 Q6ZTK2 550 aa5.45□□□□□ -1.54
GTF3C3-202ENST00000409364 CCDC36Q8IYA8 594 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms