RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 CDC14BO60729 498 aa21.51■■□□□ 1.03
DNMT3A-206ENST00000406659 RAB3DO95716 219 aa21.51■■□□□ 1.03
DNMT3A-206ENST00000406659 HPXP02790 462 aa21.51■■□□□ 1.03
DNMT3A-206ENST00000406659 CPN1P15169 458 aa21.51■■□□□ 1.03
DNMT3A-206ENST00000406659 ZNF24P17028 368 aa21.51■■□□□ 1.03
DNMT3A-206ENST00000406659 ERP29P30040 261 aaKnown RBP21.51■■□□□ 1.03
DNMT3A-206ENST00000406659 PTGFRP43088 359 aa21.51■■□□□ 1.03
DNMT3A-206ENST00000406659 NOVA1P51513 510 aaKnown RBP21.51■■□□□ 1.03
DNMT3A-206ENST00000406659 RIPPLY1Q0D2K3 151 aa21.51■■□□□ 1.03
DNMT3A-206ENST00000406659 FJX1Q86VR8 437 aa21.51■■□□□ 1.03
DNMT3A-206ENST00000406659 ZNF584Q8IVC4 421 aa21.51■■□□□ 1.03
DNMT3A-206ENST00000406659 OR51S1Q8NGJ8 323 aa21.51■■□□□ 1.03
DNMT3A-206ENST00000406659 TMEM59Q9BXS4 323 aa21.51■■□□□ 1.03
DNMT3A-206ENST00000406659 SELENOIQ9C0D9 397 aa21.51■■□□□ 1.03
DNMT3A-206ENST00000406659 LPAR5Q9H1C0 372 aa21.51■■□□□ 1.03
DNMT3A-206ENST00000406659 ZDHHC11Q9H8X9 412 aa21.51■■□□□ 1.03
DNMT3A-206ENST00000406659 SPRR3Q9UBC9 169 aa21.51■■□□□ 1.03
DNMT3A-206ENST00000406659 ZNF391Q9UJN7 358 aa21.51■■□□□ 1.03
DNMT3A-206ENST00000406659 ING4Q9UNL4 249 aa21.51■■□□□ 1.03
DNMT3A-206ENST00000406659 CSAG2Q9Y5P2 127 aa21.51■■□□□ 1.03
DNMT3A-206ENST00000406659 PTPRBP23467 1997 aa21.51■■□□□ 1.03
DNMT3A-206ENST00000406659 RTTNQ86VV8 2226 aa21.51■■□□□ 1.03
DNMT3A-206ENST00000406659 CRTAPO75718 401 aaPredicted RBP21.51■■□□□ 1.03
DNMT3A-206ENST00000406659 MELTFP08582 738 aa21.51■■□□□ 1.03
DNMT3A-206ENST00000406659 GZMKP49863 264 aa21.51■■□□□ 1.03
DNMT3A-206ENST00000406659 TRAPPC6BQ86SZ2 158 aa21.51■■□□□ 1.03
DNMT3A-206ENST00000406659 TMEM104Q8NE00 496 aa21.51■■□□□ 1.03
DNMT3A-206ENST00000406659 BANF2Q9H503 90 aa21.51■■□□□ 1.03
DNMT3A-206ENST00000406659 GPN1Q9HCN4 374 aaPredicted RBP21.51■■□□□ 1.03
DNMT3A-206ENST00000406659 GHRLQ9UBU3 117 aa21.51■■□□□ 1.03
DNMT3A-206ENST00000406659 KLK13Q9UKR3 277 aa21.51■■□□□ 1.03
DNMT3A-206ENST00000406659 DNAJC13O75165 2243 aa21.5■■□□□ 1.03
DNMT3A-206ENST00000406659 ZNF736B4DX44 427 aaPredicted RBP21.5■■□□□ 1.03
DNMT3A-206ENST00000406659 IL5P05113 134 aa21.5■■□□□ 1.03
DNMT3A-206ENST00000406659 ANXA3P12429 323 aa21.5■■□□□ 1.03
DNMT3A-206ENST00000406659 ANXA7P20073 488 aaKnown RBP21.5■■□□□ 1.03
DNMT3A-206ENST00000406659 GLDNQ6ZMI3 551 aaPredicted RBP21.5■■□□□ 1.03
DNMT3A-206ENST00000406659 MED30Q96HR3 178 aa21.5■■□□□ 1.03
DNMT3A-206ENST00000406659 NICN1Q9BSH3 213 aa21.5■■□□□ 1.03
DNMT3A-206ENST00000406659 URM1Q9BTM9 101 aaKnown RBP21.5■■□□□ 1.03
DNMT3A-206ENST00000406659 A0A096LPE4 126 aa21.49■■□□□ 1.03
DNMT3A-206ENST00000406659 A0A1W2PPZ6 126 aa21.49■■□□□ 1.03
DNMT3A-206ENST00000406659 SMLR1H3BR10 107 aa21.49■■□□□ 1.03
DNMT3A-206ENST00000406659 PYCARD-AS1I3L0S3 204 aa21.49■■□□□ 1.03
DNMT3A-206ENST00000406659 SULT1A3P0DMM9 295 aa21.49■■□□□ 1.03
DNMT3A-206ENST00000406659 SULT1A4P0DMN0 295 aa21.49■■□□□ 1.03
DNMT3A-206ENST00000406659 GNB3P16520 340 aa21.49■■□□□ 1.03
DNMT3A-206ENST00000406659 PMP22Q01453 160 aa21.49■■□□□ 1.03
DNMT3A-206ENST00000406659 FAPQ12884 760 aa21.49■■□□□ 1.03
DNMT3A-206ENST00000406659 SLC22A6Q4U2R8 563 aa21.49■■□□□ 1.03
DNMT3A-206ENST00000406659 NUFIP2Q7Z417 695 aaKnown RBP21.49■■□□□ 1.03
DNMT3A-206ENST00000406659 OR5D18Q8NGL1 313 aa21.49■■□□□ 1.03
DNMT3A-206ENST00000406659 TNFAIP8L1Q8WVP5 186 aa21.49■■□□□ 1.03
DNMT3A-206ENST00000406659 PIGTQ969N2 578 aa21.49■■□□□ 1.03
DNMT3A-206ENST00000406659 MS4A3Q96HJ5 214 aa21.49■■□□□ 1.03
DNMT3A-206ENST00000406659 S100A13Q99584 98 aa21.49■■□□□ 1.03
DNMT3A-206ENST00000406659 TRAF4Q9BUZ4 470 aaPredicted RBP21.49■■□□□ 1.03
DNMT3A-206ENST00000406659 CST11Q9H112 138 aa21.49■■□□□ 1.03
DNMT3A-206ENST00000406659 RGCCQ9H4X1 137 aa21.49■■□□□ 1.03
DNMT3A-206ENST00000406659 GPR173Q9NS66 373 aa21.49■■□□□ 1.03
DNMT3A-206ENST00000406659 ACKR3P25106 362 aa21.48■■□□□ 1.03
DNMT3A-206ENST00000406659 ALDH3B1P43353 468 aa21.48■■□□□ 1.03
DNMT3A-206ENST00000406659 MECP2P51608 486 aaKnown RBP21.48■■□□□ 1.03
DNMT3A-206ENST00000406659 IFITM2Q01629 132 aa21.48■■□□□ 1.03
DNMT3A-206ENST00000406659 SEC22CQ9BRL7 303 aa21.48■■□□□ 1.03
DNMT3A-206ENST00000406659 ATPIF1Q9UII2 106 aa21.48■■□□□ 1.03
DNMT3A-206ENST00000406659 A0A0A6YYD4 124 aa21.48■■□□□ 1.03
DNMT3A-206ENST00000406659 M0QYG6 137 aa21.48■■□□□ 1.03
DNMT3A-206ENST00000406659 RLN1P04808 185 aa21.48■■□□□ 1.03
DNMT3A-206ENST00000406659 CXCL3P19876 107 aa21.48■■□□□ 1.03
DNMT3A-206ENST00000406659 CDK10Q15131 360 aa21.48■■□□□ 1.03
DNMT3A-206ENST00000406659 DEFB109BQ30KR1 87 aa21.48■■□□□ 1.03
DNMT3A-206ENST00000406659 CPEB3Q8NE35 698 aaKnown RBP21.48■■□□□ 1.03
DNMT3A-206ENST00000406659 OR56B1Q8NGI3 324 aa21.48■■□□□ 1.03
DNMT3A-206ENST00000406659 RAB3CQ96E17 227 aa21.48■■□□□ 1.03
DNMT3A-206ENST00000406659 NPDC1Q9NQX5 325 aaPredicted RBP21.48■■□□□ 1.03
DNMT3A-206ENST00000406659 SLC22A20A6NK97 555 aa21.47■■□□□ 1.03
DNMT3A-206ENST00000406659 FABP7O15540 132 aa21.47■■□□□ 1.03
DNMT3A-206ENST00000406659 NAT2P11245 290 aa21.47■■□□□ 1.03
DNMT3A-206ENST00000406659 FOXG1P55316 489 aaPredicted RBP21.47■■□□□ 1.03
DNMT3A-206ENST00000406659 CRIP3Q6Q6R5 217 aa21.47■■□□□ 1.03
DNMT3A-206ENST00000406659 IGFL2Q6UWQ7 119 aa21.47■■□□□ 1.03
DNMT3A-206ENST00000406659 PIAS4Q8N2W9 510 aaPredicted RBP21.47■■□□□ 1.03
DNMT3A-206ENST00000406659 NUDCD2Q8WVJ2 157 aa21.47■■□□□ 1.03
DNMT3A-206ENST00000406659 TINAGL1Q9GZM7 467 aaPredicted RBP21.47■■□□□ 1.03
DNMT3A-206ENST00000406659 IFT46Q9NQC8 304 aa21.47■■□□□ 1.03
DNMT3A-206ENST00000406659 BOLA1Q9Y3E2 137 aa21.47■■□□□ 1.03
DNMT3A-206ENST00000406659 A0A1W2PP11 408 aa21.46■■□□□ 1.03
DNMT3A-206ENST00000406659 FAM172BPA6NC97 362 aa21.46■■□□□ 1.03
DNMT3A-206ENST00000406659 ZNF891A8MT65 544 aaPredicted RBP21.46■■□□□ 1.03
DNMT3A-206ENST00000406659 SOCS1O15524 211 aa21.46■■□□□ 1.03
DNMT3A-206ENST00000406659 CD74P04233 296 aa21.46■■□□□ 1.03
DNMT3A-206ENST00000406659 AMY2AP04746 511 aa21.46■■□□□ 1.03
DNMT3A-206ENST00000406659 GSTP1P09211 210 aaKnown RBP21.46■■□□□ 1.03
DNMT3A-206ENST00000406659 C1QL2Q7Z5L3 287 aa21.46■■□□□ 1.03
DNMT3A-206ENST00000406659 SPSB1Q96BD6 273 aa21.46■■□□□ 1.03
DNMT3A-206ENST00000406659 ZNF69Q9UC07 566 aa21.46■■□□□ 1.03
DNMT3A-206ENST00000406659 MEIKINA0A087WXM9 373 aa21.46■■□□□ 1.03
DNMT3A-206ENST00000406659 XRCC2O43543 280 aa21.46■■□□□ 1.03
DNMT3A-206ENST00000406659 CREBL2O60519 120 aaPredicted RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms