RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 MTFR2Q6P444 385 aa18.18■□□□□ 0.5
TPM1-208ENST00000404484 BAIAP2L2Q6UXY1 529 aa18.18■□□□□ 0.5
TPM1-208ENST00000404484 JAGN1Q8N5M9 183 aa18.18■□□□□ 0.5
TPM1-208ENST00000404484 GDPD1Q8N9F7 314 aa18.18■□□□□ 0.5
TPM1-208ENST00000404484 OR5L1Q8NGL2 311 aa18.18■□□□□ 0.5
TPM1-208ENST00000404484 OR5H6Q8NGV6 325 aa18.18■□□□□ 0.5
TPM1-208ENST00000404484 ITLN2Q8WWU7 325 aaPredicted RBP18.18■□□□□ 0.5
TPM1-208ENST00000404484 RAB40AQ8WXH6 277 aa18.18■□□□□ 0.5
TPM1-208ENST00000404484 ZNF75AQ96N20 296 aa18.18■□□□□ 0.5
TPM1-208ENST00000404484 CHST5Q9GZS9 411 aa18.18■□□□□ 0.5
TPM1-208ENST00000404484 METTL17Q9H7H0 456 aaPredicted RBP18.18■□□□□ 0.5
TPM1-208ENST00000404484 A0A0B4J203 849 aa18.17■□□□□ 0.5
TPM1-208ENST00000404484 hCG_38984A0A1B0GV85 526 aa18.17■□□□□ 0.5
TPM1-208ENST00000404484 A6NIN4 97 aa18.17■□□□□ 0.5
TPM1-208ENST00000404484 EIF4EP06730 217 aaKnown RBP18.17■□□□□ 0.5
TPM1-208ENST00000404484 ZNF14P17017 642 aaPredicted RBP18.17■□□□□ 0.5
TPM1-208ENST00000404484 C1orf100Q5SVJ3 147 aa18.17■□□□□ 0.5
TPM1-208ENST00000404484 FAM166AQ6J272 317 aa18.17■□□□□ 0.5
TPM1-208ENST00000404484 SOSTQ9BQB4 213 aa18.17■□□□□ 0.5
TPM1-208ENST00000404484 TBCCD1Q9NVR7 557 aa18.17■□□□□ 0.5
TPM1-208ENST00000404484 OR5V1Q9UGF6 321 aa18.17■□□□□ 0.5
TPM1-208ENST00000404484 RTTNQ86VV8 2226 aa18.17■□□□□ 0.5
TPM1-208ENST00000404484 OR5H1A6NKK0 313 aa18.17■□□□□ 0.5
TPM1-208ENST00000404484 FAHP16930 419 aa18.17■□□□□ 0.5
TPM1-208ENST00000404484 NR4A2P43354 598 aa18.17■□□□□ 0.5
TPM1-208ENST00000404484 GSK3AP49840 483 aa18.17■□□□□ 0.5
TPM1-208ENST00000404484 CLDN12P56749 244 aa18.17■□□□□ 0.5
TPM1-208ENST00000404484 ZNF92Q03936 586 aa18.17■□□□□ 0.5
TPM1-208ENST00000404484 RIN1Q13671 783 aa18.17■□□□□ 0.5
TPM1-208ENST00000404484 IL18Q14116 193 aa18.17■□□□□ 0.5
TPM1-208ENST00000404484 OR8B8Q15620 311 aa18.17■□□□□ 0.5
TPM1-208ENST00000404484 MRGPRGQ86SM5 289 aa18.17■□□□□ 0.5
TPM1-208ENST00000404484 FAM169BQ8N8A8 192 aa18.17■□□□□ 0.5
TPM1-208ENST00000404484 WDR31Q8NA23 367 aa18.17■□□□□ 0.5
TPM1-208ENST00000404484 SRRQ9GZT4 340 aa18.17■□□□□ 0.5
TPM1-208ENST00000404484 CDH20Q9HBT6 801 aa18.17■□□□□ 0.5
TPM1-208ENST00000404484 EIF3KQ9UBQ5 218 aaKnown RBP18.17■□□□□ 0.5
TPM1-208ENST00000404484 LOC100289279A0A1B0GTE1 492 aa18.16■□□□□ 0.5
TPM1-208ENST00000404484 ISPDA4D126 451 aa18.16■□□□□ 0.5
TPM1-208ENST00000404484 CCL2P13500 99 aa18.16■□□□□ 0.5
TPM1-208ENST00000404484 PSMB1P20618 241 aaKnown RBP18.16■□□□□ 0.5
TPM1-208ENST00000404484 IDH3GP51553 393 aaPredicted RBP18.16■□□□□ 0.5
TPM1-208ENST00000404484 FAM3AP98173 230 aa18.16■□□□□ 0.5
TPM1-208ENST00000404484 ZNF79Q15937 498 aa18.16■□□□□ 0.5
TPM1-208ENST00000404484 OR52N4Q8NGI2 321 aa18.16■□□□□ 0.5
TPM1-208ENST00000404484 FAM3DQ96BQ1 224 aa18.16■□□□□ 0.5
TPM1-208ENST00000404484 CPNE2Q96FN4 548 aaPredicted RBP18.16■□□□□ 0.5
TPM1-208ENST00000404484 MS4A3Q96HJ5 214 aa18.16■□□□□ 0.5
TPM1-208ENST00000404484 TECTBQ96PL2 329 aa18.16■□□□□ 0.5
TPM1-208ENST00000404484 ABCG5Q9H222 651 aa18.16■□□□□ 0.5
TPM1-208ENST00000404484 CGGBP1Q9UFW8 167 aaPredicted RBP18.16■□□□□ 0.5
TPM1-208ENST00000404484 NBPF19A0A087WUL8 3843 aa18.15■□□□□ 0.5
TPM1-208ENST00000404484 A0A0G2JNJ9 132 aa18.15■□□□□ 0.5
TPM1-208ENST00000404484 IGKV3-15P01624 115 aa18.15■□□□□ 0.5
TPM1-208ENST00000404484 HCKP08631 526 aa18.15■□□□□ 0.5
TPM1-208ENST00000404484 ZNF93P35789 620 aaPredicted RBP18.15■□□□□ 0.5
TPM1-208ENST00000404484 ART1P52961 327 aa18.15■□□□□ 0.5
TPM1-208ENST00000404484 P2RY14Q15391 338 aa18.15■□□□□ 0.5
TPM1-208ENST00000404484 TSC22D1Q15714 1073 aa18.15■□□□□ 0.5
TPM1-208ENST00000404484 PYDC2Q56P42 97 aa18.15■□□□□ 0.5
TPM1-208ENST00000404484 ZNF474Q6S9Z5 364 aaPredicted RBP18.15■□□□□ 0.5
TPM1-208ENST00000404484 UNQ6126/PRO20091Q6UXV3 157 aa18.15■□□□□ 0.5
TPM1-208ENST00000404484 MRPL21Q7Z2W9 205 aaKnown RBP18.15■□□□□ 0.5
TPM1-208ENST00000404484 LYPD6Q86Y78 171 aa18.15■□□□□ 0.5
TPM1-208ENST00000404484 OR5AS1Q8N127 324 aa18.15■□□□□ 0.5
TPM1-208ENST00000404484 OR4M1Q8NGD0 313 aa18.15■□□□□ 0.5
TPM1-208ENST00000404484 SPSB1Q96BD6 273 aa18.15■□□□□ 0.5
TPM1-208ENST00000404484 USB1Q9BQ65 265 aaKnown RBP18.15■□□□□ 0.5
TPM1-208ENST00000404484 ABCB10Q9NRK6 738 aa18.15■□□□□ 0.5
TPM1-208ENST00000404484 Q9UFV3 132 aa18.15■□□□□ 0.5
TPM1-208ENST00000404484 A8MXE2 369 aa18.14■□□□□ 0.49
TPM1-208ENST00000404484 ICMTO60725 284 aa18.14■□□□□ 0.49
TPM1-208ENST00000404484 PRF1P14222 555 aa18.14■□□□□ 0.49
TPM1-208ENST00000404484 BMP5P22003 454 aa18.14■□□□□ 0.49
TPM1-208ENST00000404484 PITPNBP48739 271 aa18.14■□□□□ 0.49
TPM1-208ENST00000404484 CNN3Q15417 329 aaKnown RBP18.14■□□□□ 0.49
TPM1-208ENST00000404484 TIMM23BQ5SRD1 257 aa18.14■□□□□ 0.49
TPM1-208ENST00000404484 CLVS2Q5SYC1 327 aa18.14■□□□□ 0.49
TPM1-208ENST00000404484 HIST2H2BCQ6DN03 193 aa18.14■□□□□ 0.49
TPM1-208ENST00000404484 PYHIN1Q6K0P9 492 aa18.14■□□□□ 0.49
TPM1-208ENST00000404484 FTMTQ8N4E7 242 aa18.14■□□□□ 0.49
TPM1-208ENST00000404484 ZNF808Q8N4W9 903 aaPredicted RBP18.14■□□□□ 0.49
TPM1-208ENST00000404484 SLC25A28Q96A46 364 aa18.14■□□□□ 0.49
TPM1-208ENST00000404484 S100A16Q96FQ6 103 aaKnown RBP18.14■□□□□ 0.49
TPM1-208ENST00000404484 REPIN1Q9BWE0 567 aaKnown RBP18.14■□□□□ 0.49
TPM1-208ENST00000404484 PPP1R3EQ9H7J1 279 aa18.14■□□□□ 0.49
TPM1-208ENST00000404484 RHBDL2Q9NX52 303 aa18.14■□□□□ 0.49
TPM1-208ENST00000404484 ZNF816-ZNF321PA0A0X1KG74 233 aa18.13■□□□□ 0.49
TPM1-208ENST00000404484 EEF1E1-BLOC1S5C9J1V9 151 aa18.13■□□□□ 0.49
TPM1-208ENST00000404484 EEF1E1O43324 174 aaKnown RBP18.13■□□□□ 0.49
TPM1-208ENST00000404484 ARSBP15848 533 aa18.13■□□□□ 0.49
TPM1-208ENST00000404484 PRKACBP22694 351 aa18.13■□□□□ 0.49
TPM1-208ENST00000404484 ACKR3P25106 362 aa18.13■□□□□ 0.49
TPM1-208ENST00000404484 POU3F4P49335 361 aa18.13■□□□□ 0.49
TPM1-208ENST00000404484 PITPNAQ00169 270 aa18.13■□□□□ 0.49
TPM1-208ENST00000404484 CDSNQ15517 529 aa18.13■□□□□ 0.49
TPM1-208ENST00000404484 OR8H2Q8N162 312 aa18.13■□□□□ 0.49
TPM1-208ENST00000404484 PNLDC1Q8NA58 520 aaKnown RBP18.13■□□□□ 0.49
TPM1-208ENST00000404484 STEAP2Q8NFT2 490 aa18.13■□□□□ 0.49
TPM1-208ENST00000404484 OR51D1Q8NGF3 324 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms