RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 COPS3Q9UNS2 423 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 RHBDD3Q9Y3P4 386 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 PPIAL4AQ9Y536 164 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 IGHV3OR16-10A0A075B7F0 116 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 hCG_1807616A0A1W2PRN6 198 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 A6NLC8 198 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 ZAR1LA6NP61 321 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 ANKRD30BLA7E2S9 258 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 A8MXK9 166 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 J3QLI3 93 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 IFNL4K9M1U5 179 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 GMDSO60547 372 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 CIB2O75838 187 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 PTBP3O95758 552 aaKnown RBP4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 FSHBP01225 129 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 IRF2P14316 349 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 ZNF12P17014 697 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 ACKR3P25106 362 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 PITPNBP48739 271 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 GMFBP60983 142 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 ESRRGP62508 458 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 GNB2P62879 340 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 ZNF154Q13106 437 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 KPNB1Q14974 876 aaKnown RBP4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 OR8B8Q15620 311 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 ZNF181Q2M3W8 571 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 ZNF404Q494X3 552 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 DMRTC1Q5HYR2 192 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 SLC35D3Q5M8T2 416 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 LIPNQ5VXI9 398 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 SLX4IPQ5VYV7 408 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 C12orf73Q69YU5 71 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 KDM4DQ6B0I6 523 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 CDPF1Q6NVV7 123 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 PLEKHG7Q6ZR37 379 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 ASRGL1Q7L266 308 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 C1orf87Q8N0U7 546 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 GCSAMQ8N6F7 178 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 CELF2-AS1Q8N7Q2 184 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 SEMA6DQ8NFY4 1073 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 OR8B3Q8NGG8 313 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 OR8S1Q8NH09 359 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 Q8TCH9 128 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 DNAJC9Q8WXX5 260 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 SEH1LQ96EE3 360 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 NEIL1Q96FI4 390 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 DUS3LQ96G46 650 aaKnown RBP4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 LYZL4Q96KX0 146 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 OR8B2Q96RD0 313 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 CNN2Q99439 309 aaKnown RBP4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 TEAD3Q99594 435 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 CIB1Q99828 191 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 SLC6A7Q99884 636 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 APOL4Q9BPW4 351 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 PAPOLGQ9BWT3 736 aaKnown RBP4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 SSBP3Q9BWW4 388 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 TEX12Q9BXU0 123 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 FGF23Q9GZV9 251 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 SLC22A4Q9H015 551 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 GABARAPL1Q9H0R8 117 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 MMADHCQ9H3L0 296 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 RIBC2Q9H4K1 309 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 FN3KRPQ9HA64 309 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 RNF7Q9UBF6 113 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 CTSZQ9UBR2 303 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 MIOXQ9UGB7 285 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 OR5V1Q9UGF6 321 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 LAMP5Q9UJQ1 280 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 IKZF2Q9UKS7 526 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 OAZ3Q9UMX2 235 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 LRCH1Q9Y2L9 728 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 LRP12Q9Y561 859 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 INSIG2Q9Y5U4 225 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 SOX21Q9Y651 276 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 AUP1Q9Y679 476 aa4.81□□□□□ -1.64
HMGB1P20-201ENST00000402555 MGAM2Q2M2H8 2515 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 PPIAL4CA0A0B4J2A2 164 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 A0A1B0GW55 424 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 ZNF850A8MQ14 1090 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 C22orf46C9J442 243 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 H3BNX3 289 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 LGALS8O00214 317 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 ADAM20O43506 726 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 FCN3O75636 299 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 APOL3O95236 402 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 APOC1P02654 83 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 GYPAP02724 150 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 TFF1P04155 84 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 DUX4L2P0CJ85 424 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 DUX4L3P0CJ86 424 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 DUX4L4P0CJ87 422 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 DUX4L5P0CJ88 424 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 DUX4L6P0CJ89 424 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 DUX4L7P0CJ90 424 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 IGHV4-38-2P0DP08 117 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 FCGR1AP12314 374 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 GATA3P23771 443 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 GNALP38405 381 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms