RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 S1PR5Q9H228 398 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 FAM53CQ9NYF3 392 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 LOC102723971A0A1B0GUV8 181 aa12.38□□□□□ -0.43
VAPA-202ENST00000400000 FCGR3BO75015 233 aa12.38□□□□□ -0.43
VAPA-202ENST00000400000 TUSC1Q2TAM9 212 aa12.38□□□□□ -0.43
VAPA-202ENST00000400000 LYSMD2Q8IV50 215 aa12.38□□□□□ -0.43
VAPA-202ENST00000400000 OR13D1Q8NGV5 346 aa12.38□□□□□ -0.43
VAPA-202ENST00000400000 RBPMSQ93062 196 aaKnown RBP12.38□□□□□ -0.43
VAPA-202ENST00000400000 EAF1Q96JC9 268 aaPredicted RBP12.38□□□□□ -0.43
VAPA-202ENST00000400000 ASIC5Q9NY37 505 aa12.38□□□□□ -0.43
VAPA-202ENST00000400000 TAAR3PQ9P1P4 343 aa12.38□□□□□ -0.43
VAPA-202ENST00000400000 CLEC18AA5D8T8 446 aa12.38□□□□□ -0.43
VAPA-202ENST00000400000 PATE3B3GLJ2 98 aa12.38□□□□□ -0.43
VAPA-202ENST00000400000 DCTDP32321 178 aa12.38□□□□□ -0.43
VAPA-202ENST00000400000 DIO1P49895 249 aa12.38□□□□□ -0.43
VAPA-202ENST00000400000 DUSP8Q13202 625 aa12.38□□□□□ -0.43
VAPA-202ENST00000400000 CLEC9AQ6UXN8 241 aa12.38□□□□□ -0.43
VAPA-202ENST00000400000 CDH26Q8IXH8 852 aa12.38□□□□□ -0.43
VAPA-202ENST00000400000 PELI3Q8N2H9 469 aa12.38□□□□□ -0.43
VAPA-202ENST00000400000 CLEC18CQ8NCF0 446 aa12.38□□□□□ -0.43
VAPA-202ENST00000400000 MMP25Q9NPA2 562 aa12.38□□□□□ -0.43
VAPA-202ENST00000400000 DUSP22Q9NRW4 184 aa12.38□□□□□ -0.43
VAPA-202ENST00000400000 ATP6V1G2-DDX39BF2Z307 99 aa12.38□□□□□ -0.43
VAPA-202ENST00000400000 EDIL3O43854 480 aa12.38□□□□□ -0.43
VAPA-202ENST00000400000 CBR3O75828 277 aa12.38□□□□□ -0.43
VAPA-202ENST00000400000 GSG1Q2KHT4 349 aa12.38□□□□□ -0.43
VAPA-202ENST00000400000 ZNF528Q3MIS6 628 aa12.38□□□□□ -0.43
VAPA-202ENST00000400000 RPUSD3Q6P087 351 aaKnown RBP12.38□□□□□ -0.43
VAPA-202ENST00000400000 LIN7CQ9NUP9 197 aaKnown RBP12.38□□□□□ -0.43
VAPA-202ENST00000400000 R4GMQ9 66 aa12.38□□□□□ -0.43
VAPA-202ENST00000400000 KIAA0100Q14667 2235 aaKnown RBP12.38□□□□□ -0.43
VAPA-202ENST00000400000 DNPH1O43598 174 aa12.38□□□□□ -0.43
VAPA-202ENST00000400000 ABCD3P28288 659 aa12.38□□□□□ -0.43
VAPA-202ENST00000400000 PPICP45877 212 aa12.38□□□□□ -0.43
VAPA-202ENST00000400000 SOX8P57073 446 aa12.38□□□□□ -0.43
VAPA-202ENST00000400000 RPS4XP62701 263 aaKnown RBP12.38□□□□□ -0.43
VAPA-202ENST00000400000 C19orf57Q0VDD7 668 aa12.38□□□□□ -0.43
VAPA-202ENST00000400000 TMEM88Q6PEY1 159 aa12.38□□□□□ -0.43
VAPA-202ENST00000400000 OR1L3Q8NH93 324 aa12.38□□□□□ -0.43
VAPA-202ENST00000400000 SRRQ9GZT4 340 aa12.38□□□□□ -0.43
VAPA-202ENST00000400000 PDGFBP01127 241 aaPredicted RBP12.38□□□□□ -0.43
VAPA-202ENST00000400000 HOXB3P14651 431 aaPredicted RBP12.38□□□□□ -0.43
VAPA-202ENST00000400000 TMEM65Q6PI78 240 aa12.38□□□□□ -0.43
VAPA-202ENST00000400000 MAMSTRQ6ZN01 415 aa12.38□□□□□ -0.43
VAPA-202ENST00000400000 NUP205Q92621 2012 aa12.38□□□□□ -0.43
VAPA-202ENST00000400000 H0YIG0 161 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 FABP4P15090 132 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 BSGP35613 385 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 TMEM92Q6UXU6 159 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 ACTR3CQ9C0K3 210 aaPredicted RBP12.37□□□□□ -0.43
VAPA-202ENST00000400000 G3V3Q6 166 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 CCR9P51686 369 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 ACOT6Q3I5F7 207 aaPredicted RBP12.37□□□□□ -0.43
VAPA-202ENST00000400000 AMER3Q8N944 861 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 NOXO1Q8NFA2 376 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 OR52N4Q8NGI2 321 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 LILRB4Q8NHJ6 448 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 SLC25A46Q96AG3 418 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 KCTD12Q96CX2 325 aaKnown RBP12.37□□□□□ -0.43
VAPA-202ENST00000400000 PCOLCE2Q9UKZ9 415 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 LRRC37A3O60309 1634 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 MT-ND4LP03901 98 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 SULT1A3P0DMM9 295 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 SULT1A4P0DMN0 295 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 ZBTB25P24278 435 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 ERVFC1-1P60608 527 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 SNRPGP62308 76 aaKnown RBP12.37□□□□□ -0.43
VAPA-202ENST00000400000 CYHR1Q6ZMK1 362 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 THSD4Q6ZMP0 1018 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 ANKRD53Q8N9V6 530 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 LHX4Q969G2 390 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 HSD17B10Q99714 261 aaKnown RBP12.37□□□□□ -0.43
VAPA-202ENST00000400000 KLK11Q9UBX7 282 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 PSG11Q9UQ72 335 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 LOC102724200A0A096LPH7 203 aaPredicted RBP12.37□□□□□ -0.43
VAPA-202ENST00000400000 A0A1B0GTL3 188 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 RAB19A4D1S5 217 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 PPP5D1E7EU14 171 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 GPX5O75715 221 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 MGMTP16455 207 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 OR52N1Q8NH53 320 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 RPEQ96AT9 228 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 A0A1B0GTH9 108 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 MPZL1O95297 269 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 NQO2P16083 231 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 STAC2Q6ZMT1 411 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 OR4C3Q8NH37 302 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 ALG1L2C9J202 215 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 ZNF701M0R085 212 aaPredicted RBP12.37□□□□□ -0.43
VAPA-202ENST00000400000 SMUG1Q53HV7 270 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 RNFT1Q5M7Z0 435 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 FOXB1Q99853 325 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 KCNK15Q9H427 330 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 HES4Q9HCC6 221 aa12.37□□□□□ -0.43
VAPA-202ENST00000400000 IGHV3-21A0A0B4J1V1 117 aa12.36□□□□□ -0.43
VAPA-202ENST00000400000 M0R296 226 aa12.36□□□□□ -0.43
VAPA-202ENST00000400000 GYPAP02724 150 aa12.36□□□□□ -0.43
VAPA-202ENST00000400000 SCGB1C2P0DMR2 95 aa12.36□□□□□ -0.43
VAPA-202ENST00000400000 TCTAP57738 103 aa12.36□□□□□ -0.43
VAPA-202ENST00000400000 OR2F1Q13607 317 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms