RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 FOXJ3Q9UPW0 622 aa6.39□□□□□ -1.39
USP16-204ENST00000399976 LAMP3Q9UQV4 416 aa6.39□□□□□ -1.39
USP16-204ENST00000399976 MYRFQ9Y2G1 1151 aa6.39□□□□□ -1.39
USP16-204ENST00000399976 PDZD2O15018 2839 aa6.39□□□□□ -1.39
USP16-204ENST00000399976 ALPK2Q86TB3 2170 aa6.39□□□□□ -1.39
USP16-204ENST00000399976 SMIM31A0A1B0GVY4 71 aa6.39□□□□□ -1.39
USP16-204ENST00000399976 ZSCAN5BA6NJL1 495 aa6.39□□□□□ -1.39
USP16-204ENST00000399976 A8MXK9 166 aa6.39□□□□□ -1.39
USP16-204ENST00000399976 F5H0A9 414 aaPredicted RBP6.39□□□□□ -1.39
USP16-204ENST00000399976 SC5DO75845 299 aa6.39□□□□□ -1.39
USP16-204ENST00000399976 PRKACBP22694 351 aa6.39□□□□□ -1.39
USP16-204ENST00000399976 MFGE8Q08431 387 aaPredicted RBP6.39□□□□□ -1.39
USP16-204ENST00000399976 CNN3Q15417 329 aaKnown RBP6.39□□□□□ -1.39
USP16-204ENST00000399976 KCNJ8Q15842 424 aa6.39□□□□□ -1.39
USP16-204ENST00000399976 TEX36Q5VZQ5 186 aa6.39□□□□□ -1.39
USP16-204ENST00000399976 TGIF2LYQ8IUE0 185 aa6.39□□□□□ -1.39
USP16-204ENST00000399976 ZDHHC23Q8IYP9 409 aa6.39□□□□□ -1.39
USP16-204ENST00000399976 RFLNBQ8N5W9 214 aa6.39□□□□□ -1.39
USP16-204ENST00000399976 ZSCAN4Q8NAM6 433 aaPredicted RBP6.39□□□□□ -1.39
USP16-204ENST00000399976 ITPKCQ96DU7 683 aa6.39□□□□□ -1.39
USP16-204ENST00000399976 MEGF10Q96KG7 1140 aa6.39□□□□□ -1.39
USP16-204ENST00000399976 MICU1Q9BPX6 476 aa6.39□□□□□ -1.39
USP16-204ENST00000399976 PIMREGQ9BSJ6 248 aa6.39□□□□□ -1.39
USP16-204ENST00000399976 ZNF275Q9NSD4 429 aaPredicted RBP6.39□□□□□ -1.39
USP16-204ENST00000399976 ACOXLQ9NUZ1 547 aa6.39□□□□□ -1.39
USP16-204ENST00000399976 ZNF319Q9P2F9 582 aa6.39□□□□□ -1.39
USP16-204ENST00000399976 MYEF2Q9P2K5 600 aaKnown RBP6.39□□□□□ -1.39
USP16-204ENST00000399976 GNG8Q9UK08 70 aa6.39□□□□□ -1.39
USP16-204ENST00000399976 ZNF281Q9Y2X9 895 aa6.39□□□□□ -1.39
USP16-204ENST00000399976 TRBV5-7A0A0A0MS05 114 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 GGT3PA6NGU5 568 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 MYL12BO14950 172 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 MLNRO43193 412 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 TNFAIP8O95379 198 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 LHBP01229 141 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 ADRA2AP08913 450 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 CCL2P13500 99 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 CPEP16870 476 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 JUNBP17275 347 aaPredicted RBP6.38□□□□□ -1.39
USP16-204ENST00000399976 LSAMPQ13449 338 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 CLEC2AQ6UVW9 174 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 Q8NFD4 153 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 SPRYD4Q8WW59 207 aaPredicted RBP6.38□□□□□ -1.39
USP16-204ENST00000399976 PPP1R14BQ96C90 147 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 PGLYRP3Q96LB9 341 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 FN3KRPQ9HA64 309 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 VCX3AQ9NNX9 186 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 YLPM1P49750 1951 aaKnown RBP6.38□□□□□ -1.39
USP16-204ENST00000399976 IGHV1-69-2A0A0G2JMI3 117 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 PQLC2LA1A4F0 135 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 LRRC30A6NM36 301 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 ANXA2P2A6NMY6 339 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 GPR37O15354 613 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 CLPTM1O96005 669 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 CCNOP22674 350 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 GNALP38405 381 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 RPS27P42677 84 aaKnown RBP6.38□□□□□ -1.39
USP16-204ENST00000399976 ALDH3B1P43353 468 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 PRKXP51817 358 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 CHN2P52757 468 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 ATP5J2P56134 94 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 OR12D2P58182 307 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 ERVS71-1P61550 626 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 TNFAIP6P98066 277 aaPredicted RBP6.38□□□□□ -1.39
USP16-204ENST00000399976 SMN1Q16637 294 aaKnown RBP6.38□□□□□ -1.39
USP16-204ENST00000399976 ZNF773Q6PK81 442 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 CD200R1LQ6Q8B3 271 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 LRP11Q86VZ4 500 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 Q8IYB0 196 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 OR56B2PQ8NGI1 322 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 OR11L1Q8NGX0 322 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 OR5AK2Q8NH90 309 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 GPR148Q8TDV2 347 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 SLC7A6Q92536 515 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 ADAT1Q9BUB4 502 aaKnown RBP6.38□□□□□ -1.39
USP16-204ENST00000399976 GPR84Q9NQS5 396 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 KAAG1Q9UBP8 84 aa6.38□□□□□ -1.39
USP16-204ENST00000399976 FASNP49327 2511 aaKnown RBP6.37□□□□□ -1.39
USP16-204ENST00000399976 LOC107986453A0A1B0GWG9 222 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 CLIC3O95833 236 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 DAOP14920 347 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 IGFBP3P17936 291 aaPredicted RBP6.37□□□□□ -1.39
USP16-204ENST00000399976 FUT6P51993 359 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 GNG3P63215 75 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 IL24Q13007 206 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 OR8G1Q15617 311 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 ATPAF1Q5TC12 328 aaPredicted RBP6.37□□□□□ -1.39
USP16-204ENST00000399976 ASCL4Q6XD76 172 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 LHFPL2Q6ZUX7 228 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 LHFPL3Q86UP9 236 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 NAA40Q86UY6 237 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 TEX29Q8N6K0 151 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 SYT3Q9BQG1 590 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 TMUB1Q9BVT8 246 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 TPK1Q9H3S4 243 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 SAP30LQ9HAJ7 183 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 PAK1IP1Q9NWT1 392 aaPredicted RBP6.37□□□□□ -1.39
USP16-204ENST00000399976 IL36GQ9NZH8 169 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 DYSFO75923 2080 aa6.37□□□□□ -1.39
USP16-204ENST00000399976 CLDN25C9JDP6 229 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms