RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 RFNGQ9Y644 331 aa8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 CHD9Q3L8U1 2897 aa8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 MEGF11A6BM72 1044 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 C2orf74A8MZ97 194 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 ZNF878C9JN71 531 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 PRAMEF26H0Y7S4 382 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 ZNF217O75362 1048 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 IFNA2P01563 188 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 CSTBP04080 98 aaKnown RBP8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 HEXAP06865 529 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 HCKP08631 526 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 FCGR3AP08637 254 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 JMJD7P0C870 316 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 ZNF93P35789 620 aaPredicted RBP8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 DVL1P1P54792 670 aaPredicted RBP8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 TMEM33P57088 247 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 FOXL2P58012 376 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 GLO1Q04760 184 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 TSC22D1Q15714 1073 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 ISXQ2M1V0 245 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 RNF212Q495C1 297 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 ARMC6Q6NXE6 501 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 MRPL38Q96DV4 380 aaKnown RBP8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 ARHGAP5-AS1Q96IT6 56 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 NMES1Q9C002 83 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 SLC5A7Q9GZV3 580 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 FANCMQ8IYD8 2048 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 CCDC163A0A0D9SF12 145 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 A0A1B0GV90 55 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 BLACEA4D250 179 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 PHYHO14832 338 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 NSA2O95478 260 aaKnown RBP8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 IGHV2-70P01814 119 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 SULT1A1P50225 295 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 RPL27P61353 136 aaKnown RBP8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 NAAAQ02083 359 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 HGFACQ04756 655 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 SRSF4Q08170 494 aaKnown RBP8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 GUK1Q16774 197 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 RSPO4Q2I0M5 234 aaPredicted RBP8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 ZNF529Q6P280 563 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 YAF2Q8IY57 180 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 ZNF383Q8NA42 475 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 OR9K2Q8NGE7 335 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 MFSD8Q8NHS3 518 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 OR51E1Q8TCB6 317 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 ERGIC1Q969X5 290 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 REEP6Q96HR9 211 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 CDC6Q99741 560 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 TOLLIPQ9H0E2 274 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 MYOZ1Q9NP98 299 aaPredicted RBP8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 IGKV1D-43A0A0B4J1Z2 117 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 AP4M1O00189 453 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 MFNGO00587 321 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 YKT6O15498 198 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 RAD51DO75771 328 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 ZNF117Q03924 483 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 RUNX3Q13761 415 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 THAP3Q8WTV1 239 aaPredicted RBP8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 TOMM40LQ969M1 308 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 C8orf44Q96CB5 159 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 SMIM8Q96KF7 97 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 KCNJ16Q9NPI9 418 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 VSX1Q9NZR4 365 aaPredicted RBP8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 RHBDD3Q9Y3P4 386 aa8.76□□□□□ -1.01
PTCHD4-202ENST00000398738 CXorf65A6NEN9 183 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 SFT2D2O95562 160 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 CD5P06127 495 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 ZNF20P17024 532 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 HLA-GP17693 338 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 SERPINA2P20848 420 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 GPR3P46089 330 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 OR3A4PP47883 348 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 SUPT4H1P63272 117 aaKnown RBP8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 ZNF674Q2M3X9 581 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 C14orf28Q4W4Y0 310 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 PLAC9Q5JTB6 97 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 TEX30Q5JUR7 227 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 ZNF776Q68DI1 518 aaPredicted RBP8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 C16orf47Q6ZP98 133 aaPredicted RBP8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 MAMDC2Q7Z304 686 aaPredicted RBP8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 HOGA1Q86XE5 327 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 MEGF10Q96KG7 1140 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 C2orf50Q96LR7 162 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 TBL1XR1Q9BZK7 514 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 KPTNQ9Y664 436 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 R4GMQ9 66 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 FOXS1O43638 330 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 HKR1P10072 659 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 IGFBP3P17936 291 aaPredicted RBP8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 S100A2P29034 98 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 RBMXP38159 391 aaKnown RBP8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 OR1D4P47884 311 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 NFATC4Q14934 902 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 TMEM244Q5VVB8 128 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 ZNF343Q6P1L6 599 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 ABHD12BQ7Z5M8 362 aaPredicted RBP8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 OR10H5Q8NGA6 315 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 OR10D4PQ8NGN7 298 aa8.75□□□□□ -1.01
PTCHD4-202ENST00000398738 C5orf34Q96MH7 638 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms