RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 OR2J3O76001 311 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 DRAM2Q6UX65 266 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 KLHDC8BQ8IXV7 354 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 GABRG3Q99928 467 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 PLSCR3Q9NRY6 295 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 CCL21O00585 134 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 TMPRSS2O15393 492 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 SLC25A6P12236 298 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 MMP25Q9NPA2 562 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 CD3EP07766 207 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 SPINK9Q5DT21 86 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 C20orf196Q8IYI0 205 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 NECAP1Q8NC96 275 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 OR10P1Q8NGE3 313 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 APH1BQ8WW43 257 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 DFFBO76075 338 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 PIGPP57054 158 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 BPIFB3P59826 476 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 TAGLNQ01995 201 aaKnown RBP10.18□□□□□ -0.78
TTC28-201ENST00000397906 PRICKLE4Q2TBC4 344 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 ZNF230Q9UIE0 474 aaPredicted RBP10.18□□□□□ -0.78
TTC28-201ENST00000397906 LYG1Q8N1E2 194 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 PELI1Q96FA3 418 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 DOCK5Q9H7D0 1870 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 LRP5O75197 1615 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 LINC01387J3KSC0 135 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 FCN2Q15485 313 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 RFESDQ8TAC1 157 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 MITD1Q8WV92 249 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 TAAR6Q96RI8 345 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 TAGLN2P37802 199 aaKnown RBP10.18□□□□□ -0.78
TTC28-201ENST00000397906 OR8U1Q8NH10 309 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 RREB1Q92766 1687 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 STRCP1A6NGW2 1772 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 CTU2Q2VPK5 515 aaKnown RBP10.17□□□□□ -0.78
TTC28-201ENST00000397906 PABPC1L2AQ5JQF8 200 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 OR10R2Q8NGX6 335 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 CMBLQ96DG6 245 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 NIPSNAP3BQ9BS92 247 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 PLXNB2O15031 1838 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 ARAP2Q8WZ64 1704 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 KRBOX1C9JBD0 128 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 OPRK1P41145 380 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 ETV6P41212 452 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 RFX2P48378 723 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 C19orf48Q6RUI8 117 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 LRRC29Q8WV35 223 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 PHYHIPQ92561 330 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 LRFN3Q9BTN0 628 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 MED9Q9NWA0 146 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 V9GYS6 101 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 KLK8O60259 260 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 RAE1P78406 368 aaKnown RBP10.17□□□□□ -0.78
TTC28-201ENST00000397906 LCN15Q6UWW0 184 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 TMEM123Q8N131 208 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 MCHR2Q969V1 340 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 SMIM19Q96E16 107 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 H3BP45 60 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 OR4F5Q8NH21 305 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 OR4F4Q96R69 305 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 DNASE2O00115 360 aaPredicted RBP10.17□□□□□ -0.78
TTC28-201ENST00000397906 HAGHQ16775 308 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 STPG1Q5TH74 334 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 MRPS18BQ9Y676 258 aaKnown RBP10.17□□□□□ -0.78
TTC28-201ENST00000397906 RNF141Q8WVD5 230 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 TMPRSS13Q9BYE2 586 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 PSENENQ9NZ42 101 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 CLCF1Q9UBD9 225 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 AK3Q9UIJ7 227 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 MN1Q10571 1320 aaPredicted RBP10.17□□□□□ -0.78
TTC28-201ENST00000397906 NKG7Q16617 165 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 SLC25A21Q9BQT8 299 aaPredicted RBP10.17□□□□□ -0.78
TTC28-201ENST00000397906 M0R1X1 148 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 FBXO34Q9NWN3 711 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 A0A1B0GVG6 124 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 KRASP01116 189 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 RAF1P04049 648 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 OR5H8P0DN80 308 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 ZNF32P17041 273 aa10.17□□□□□ -0.78
TTC28-201ENST00000397906 CMPK2Q5EBM0 449 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 GPR87Q9BY21 358 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 ZAR1LA6NP61 321 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 LRP3O75074 770 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 TMEM129A0AVI4 362 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 OIP5O43482 229 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 SVBPQ8N300 66 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 STRAPQ9Y3F4 350 aaKnown RBP10.16□□□□□ -0.78
TTC28-201ENST00000397906 TMEM30CPA0ZSE6 113 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 GPR32P1Q8NGA4 272 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 OR13C8Q8NGS7 320 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 SEC14L6B5MCN3 397 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 TGFBR1P36897 503 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 SNRPNP63162 240 aaKnown RBP10.16□□□□□ -0.78
TTC28-201ENST00000397906 TMPRSS11FQ6ZWK6 438 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 KCNRGQ8N5I3 272 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 OR13G1Q8NGZ3 307 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 MARCH1Q8TCQ1 289 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 YIPF5Q969M3 257 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 BCL2L10Q9HD36 194 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 TUSC5Q8IXB3 177 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms