RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 OTPQ5XKR4 325 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 TMEM225Q6GV28 225 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 RTL6Q6ICC9 239 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 GLRX5Q86SX6 157 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 OR1J1Q8NGS3 322 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 ATOH1Q92858 354 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-205ENST00000397611 ANKRD9Q96BM1 317 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-205ENST00000397611 THOC3Q96J01 351 aaKnown RBP4.89□□□□□ -1.63
PTPRD-205ENST00000397611 LPAR4Q99677 370 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 ELOVL1Q9BW60 279 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 TMEM59Q9BXS4 323 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 TXNIPQ9H3M7 391 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 SEMA5BQ9P283 1151 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 GNG13Q9P2W3 67 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 CXorf65A6NEN9 183 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 H0Y8G0 127 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 PHF1O43189 567 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-205ENST00000397611 MPGP29372 298 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 ASCL1P50553 236 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 SKP2Q13309 424 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 SLC17A1Q14916 467 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 DEFB110Q30KQ9 67 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 GLIPR1L1Q6UWM5 242 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 C17orf82Q86X59 251 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-205ENST00000397611 LINC00346Q8IVM7 164 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 FGF14Q92915 247 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 BORCS7Q96B45 105 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 PEX11GQ96HA9 241 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 CABLES2Q9BTV7 478 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 NXF5Q9H1B4 397 aaKnown RBP4.89□□□□□ -1.63
PTPRD-205ENST00000397611 CHST11Q9NPF2 352 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 MDFIC2A0A1B0GVS7 189 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 H7BYZ3 331 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 NRG2O14511 850 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-205ENST00000397611 XRCC2O43543 280 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 APOA2P02652 100 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 ENPP1P22413 925 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 HRH1P35367 487 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 RPS27P42677 84 aaKnown RBP4.89□□□□□ -1.63
PTPRD-205ENST00000397611 MESP2Q0VG99 397 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 C2orf76Q3KRA6 126 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 PHLDA2Q53GA4 152 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 RBMS3Q6XE24 437 aaKnown RBP4.89□□□□□ -1.63
PTPRD-205ENST00000397611 SLC36A1Q7Z2H8 476 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 TMEFF1Q8IYR6 380 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 OR13D1Q8NGV5 346 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 MRPS24Q96EL2 167 aaKnown RBP4.89□□□□□ -1.63
PTPRD-205ENST00000397611 TVP23CQ96ET8 276 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 TCTN2Q96GX1 697 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 METTL7AQ9H8H3 244 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 GPR173Q9NS66 373 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 HRASLS2Q9NWW9 162 aa4.89□□□□□ -1.63
PTPRD-205ENST00000397611 A0A1W2PPQ1 181 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 SEC14L6B5MCN3 397 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 M0R143 59 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 PTBP3O95758 552 aaKnown RBP4.88□□□□□ -1.63
PTPRD-205ENST00000397611 CT45A8P0DMV1 189 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 CT45A9P0DMV2 189 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 GNB3P16520 340 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 SNCAP37840 140 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 CT45A2Q5DJT8 189 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 LCN15Q6UWW0 184 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 RABEPKQ7Z6M1 372 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 OR51A4Q8NGJ6 313 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 OR4C3Q8NH37 302 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 GPR119Q8TDV5 335 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 THAP3Q8WTV1 239 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-205ENST00000397611 FGGYQ96C11 551 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 OR51M1Q9H341 326 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 PLK3Q9H4B4 646 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 CACNA1EQ15878 2313 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 SPTY2D1-AS1A0A0U1RR47 76 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 HPNP05981 417 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 ANKRD34CP0C6C1 535 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 PNLIPRP3Q17RR3 467 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 OR5L1Q8NGL2 311 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 DAZLQ92904 295 aaKnown RBP4.88□□□□□ -1.63
PTPRD-205ENST00000397611 RNF166Q96A37 237 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-205ENST00000397611 KNTC1P50748 2209 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 IGKV3D-11A0A0A0MRZ8 115 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 FAM57BQ71RH2 274 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 GRINAQ7Z429 371 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 LDLRAD3Q86YD5 345 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 ZNF596Q8TC21 504 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 SEC11CQ9BY50 192 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 BANF2Q9H503 90 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 GCM1Q9NP62 436 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 EMC9Q9Y3B6 208 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 IGKV1D-42A0A075B6H8 117 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 LOC102724200A0A096LPH7 203 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-205ENST00000397611 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-205ENST00000397611 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-205ENST00000397611 F5H5K5 113 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 RAB27BO00194 218 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 SDCBPO00560 298 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-205ENST00000397611 NDUFA2O43678 99 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 SOX15O60248 233 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 CTAG2O75638 210 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 METTL15P1P0C7V9 234 aa4.88□□□□□ -1.63
PTPRD-205ENST00000397611 RNF224P0DH78 156 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms