RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 SSC4DQ8WTU2 575 aa23.63■■□□□ 1.37
CPNE1-203ENST00000397442 BCL2L14Q9BZR8 327 aa23.63■■□□□ 1.37
CPNE1-203ENST00000397442 ZNF816-ZNF321PA0A0X1KG74 233 aa23.62■■□□□ 1.37
CPNE1-203ENST00000397442 GGT3PA6NGU5 568 aa23.62■■□□□ 1.37
CPNE1-203ENST00000397442 CD300LBA8K4G0 201 aa23.62■■□□□ 1.37
CPNE1-203ENST00000397442 GMDSO60547 372 aa23.62■■□□□ 1.37
CPNE1-203ENST00000397442 CRYAAP02489 173 aa23.62■■□□□ 1.37
CPNE1-203ENST00000397442 SNTB1Q13884 538 aaKnown RBP23.62■■□□□ 1.37
CPNE1-203ENST00000397442 RNF144BQ7Z419 303 aa23.62■■□□□ 1.37
CPNE1-203ENST00000397442 GPR173Q9NS66 373 aa23.62■■□□□ 1.37
CPNE1-203ENST00000397442 CGGBP1Q9UFW8 167 aaPredicted RBP23.62■■□□□ 1.37
CPNE1-203ENST00000397442 PAHP00439 452 aa23.61■■□□□ 1.37
CPNE1-203ENST00000397442 AGAP20933 346 aa23.61■■□□□ 1.37
CPNE1-203ENST00000397442 SORDQ00796 357 aa23.61■■□□□ 1.37
CPNE1-203ENST00000397442 TMEM255AQ5JRV8 349 aa23.61■■□□□ 1.37
CPNE1-203ENST00000397442 CLVS2Q5SYC1 327 aa23.61■■□□□ 1.37
CPNE1-203ENST00000397442 GLT8D1Q68CQ7 371 aa23.61■■□□□ 1.37
CPNE1-203ENST00000397442 UNQ6126/PRO20091Q6UXV3 157 aa23.61■■□□□ 1.37
CPNE1-203ENST00000397442 ACOT12Q8WYK0 555 aa23.61■■□□□ 1.37
CPNE1-203ENST00000397442 CMBLQ96DG6 245 aa23.61■■□□□ 1.37
CPNE1-203ENST00000397442 MIXL1Q9H2W2 232 aa23.61■■□□□ 1.37
CPNE1-203ENST00000397442 PEX16Q9Y5Y5 336 aa23.61■■□□□ 1.37
CPNE1-203ENST00000397442 HCFC1P51610 2035 aa23.61■■□□□ 1.37
CPNE1-203ENST00000397442 DPRXA6NFQ7 191 aa23.6■■□□□ 1.37
CPNE1-203ENST00000397442 LILRA1O75019 489 aa23.6■■□□□ 1.37
CPNE1-203ENST00000397442 INHBBP09529 407 aa23.6■■□□□ 1.37
CPNE1-203ENST00000397442 TUBG1P23258 451 aa23.6■■□□□ 1.37
CPNE1-203ENST00000397442 CLDN12P56749 244 aa23.6■■□□□ 1.37
CPNE1-203ENST00000397442 DDI2Q5TDH0 399 aa23.6■■□□□ 1.37
CPNE1-203ENST00000397442 CRIP3Q6Q6R5 217 aa23.6■■□□□ 1.37
CPNE1-203ENST00000397442 KLF14Q8TD94 323 aaPredicted RBP23.6■■□□□ 1.37
CPNE1-203ENST00000397442 LRRC46Q96FV0 321 aa23.6■■□□□ 1.37
CPNE1-203ENST00000397442 TUBG2Q9NRH3 451 aa23.6■■□□□ 1.37
CPNE1-203ENST00000397442 COMMD3Q9UBI1 195 aa23.6■■□□□ 1.37
CPNE1-203ENST00000397442 SLC17A2O00624 439 aa23.6■■□□□ 1.37
CPNE1-203ENST00000397442 TMEM127O75204 238 aa23.6■■□□□ 1.37
CPNE1-203ENST00000397442 NRASP01111 189 aa23.6■■□□□ 1.37
CPNE1-203ENST00000397442 ALDOBP05062 364 aa23.6■■□□□ 1.37
CPNE1-203ENST00000397442 PRF1P14222 555 aa23.6■■□□□ 1.37
CPNE1-203ENST00000397442 RAC2P15153 192 aa23.6■■□□□ 1.37
CPNE1-203ENST00000397442 PTAFRP25105 342 aa23.6■■□□□ 1.37
CPNE1-203ENST00000397442 MPV17P39210 176 aa23.6■■□□□ 1.37
CPNE1-203ENST00000397442 NKX6-1P78426 367 aaPredicted RBP23.6■■□□□ 1.37
CPNE1-203ENST00000397442 DYNC1I2Q13409 638 aaKnown RBP23.6■■□□□ 1.37
CPNE1-203ENST00000397442 C1orf100Q5SVJ3 147 aa23.6■■□□□ 1.37
CPNE1-203ENST00000397442 OR2T2Q6IF00 324 aa23.6■■□□□ 1.37
CPNE1-203ENST00000397442 XKRXQ6PP77 449 aa23.6■■□□□ 1.37
CPNE1-203ENST00000397442 TMEM108Q6UXF1 575 aa23.6■■□□□ 1.37
CPNE1-203ENST00000397442 LAX1Q8IWV1 398 aa23.6■■□□□ 1.37
CPNE1-203ENST00000397442 CSNK2A3Q8NEV1 391 aa23.6■■□□□ 1.37
CPNE1-203ENST00000397442 HAVCR1Q96D42 359 aa23.6■■□□□ 1.37
CPNE1-203ENST00000397442 PLGRKTQ9HBL7 147 aa23.6■■□□□ 1.37
CPNE1-203ENST00000397442 ABCB9Q9NP78 766 aa23.6■■□□□ 1.37
CPNE1-203ENST00000397442 KCNN3Q9UGI6 736 aa23.6■■□□□ 1.37
CPNE1-203ENST00000397442 ATP6V1G2-DDX39BF2Z307 99 aa23.59■■□□□ 1.37
CPNE1-203ENST00000397442 ERCC1P07992 297 aaPredicted RBP23.59■■□□□ 1.37
CPNE1-203ENST00000397442 SNRPBP14678 240 aaKnown RBP23.59■■□□□ 1.37
CPNE1-203ENST00000397442 C1orf174Q8IYL3 243 aa23.59■■□□□ 1.37
CPNE1-203ENST00000397442 JAGN1Q8N5M9 183 aa23.59■■□□□ 1.37
CPNE1-203ENST00000397442 SLC25A28Q96A46 364 aa23.59■■□□□ 1.37
CPNE1-203ENST00000397442 SPACA5Q96QH8 159 aa23.59■■□□□ 1.37
CPNE1-203ENST00000397442 METTL17Q9H7H0 456 aaPredicted RBP23.59■■□□□ 1.37
CPNE1-203ENST00000397442 LIN7BQ9HAP6 207 aa23.59■■□□□ 1.37
CPNE1-203ENST00000397442 ABRACLQ9P1F3 81 aa23.59■■□□□ 1.37
CPNE1-203ENST00000397442 STEAP1Q9UHE8 339 aa23.59■■□□□ 1.37
CPNE1-203ENST00000397442 RGS5O15539 181 aa23.58■■□□□ 1.37
CPNE1-203ENST00000397442 CST4P01036 141 aa23.58■■□□□ 1.37
CPNE1-203ENST00000397442 AZGP1P25311 298 aaKnown RBP23.58■■□□□ 1.37
CPNE1-203ENST00000397442 PSG7Q13046 419 aa23.58■■□□□ 1.37
CPNE1-203ENST00000397442 MOGQ16653 247 aa23.58■■□□□ 1.37
CPNE1-203ENST00000397442 ZNF808Q8N4W9 903 aaPredicted RBP23.58■■□□□ 1.37
CPNE1-203ENST00000397442 BHLHE23Q8NDY6 225 aa23.58■■□□□ 1.37
CPNE1-203ENST00000397442 OR5H6Q8NGV6 325 aa23.58■■□□□ 1.37
CPNE1-203ENST00000397442 LINC01560Q8TB33 94 aa23.58■■□□□ 1.37
CPNE1-203ENST00000397442 TRMT10AQ8TBZ6 339 aaKnown RBP23.58■■□□□ 1.37
CPNE1-203ENST00000397442 NPRL2Q8WTW4 380 aa23.58■■□□□ 1.37
CPNE1-203ENST00000397442 PIGCQ92535 297 aa23.58■■□□□ 1.37
CPNE1-203ENST00000397442 PIGTQ969N2 578 aa23.58■■□□□ 1.37
CPNE1-203ENST00000397442 FOXRED1Q96CU9 486 aaPredicted RBP23.58■■□□□ 1.37
CPNE1-203ENST00000397442 CMAHPQ9Y471 501 aa23.58■■□□□ 1.37
CPNE1-203ENST00000397442 CLDN14O95500 239 aa23.57■■□□□ 1.36
CPNE1-203ENST00000397442 SNTB2Q13425 540 aaKnown RBP23.57■■□□□ 1.36
CPNE1-203ENST00000397442 ALKBH6Q3KRA9 238 aa23.57■■□□□ 1.36
CPNE1-203ENST00000397442 MZT2AQ6P582 158 aa23.57■■□□□ 1.36
CPNE1-203ENST00000397442 CDH26Q8IXH8 852 aa23.57■■□□□ 1.36
CPNE1-203ENST00000397442 CNTD2Q9H8S5 307 aa23.57■■□□□ 1.36
CPNE1-203ENST00000397442 AKIP1Q9NQ31 210 aa23.57■■□□□ 1.36
CPNE1-203ENST00000397442 GPR160Q9UJ42 338 aa23.57■■□□□ 1.36
CPNE1-203ENST00000397442 ZNF850A8MQ14 1090 aa23.57■■□□□ 1.36
CPNE1-203ENST00000397442 HPGDSO60760 199 aa23.57■■□□□ 1.36
CPNE1-203ENST00000397442 HCKP08631 526 aa23.57■■□□□ 1.36
CPNE1-203ENST00000397442 TNFSF8P32971 234 aa23.57■■□□□ 1.36
CPNE1-203ENST00000397442 S100A5P33763 92 aa23.57■■□□□ 1.36
CPNE1-203ENST00000397442 ZNF93P35789 620 aaPredicted RBP23.57■■□□□ 1.36
CPNE1-203ENST00000397442 BSPH1Q075Z2 132 aa23.57■■□□□ 1.36
CPNE1-203ENST00000397442 MSMPQ1L6U9 139 aa23.57■■□□□ 1.36
CPNE1-203ENST00000397442 OR4D6Q8NGJ1 314 aa23.57■■□□□ 1.36
CPNE1-203ENST00000397442 OR6M1Q8NGM8 313 aa23.57■■□□□ 1.36
CPNE1-203ENST00000397442 LGALS14Q8TCE9 139 aa23.57■■□□□ 1.36
CPNE1-203ENST00000397442 UQCC2Q9BRT2 126 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms