RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 FAHP16930 419 aa14.54□□□□□ -0.08
TSPAN4-205ENST00000397406 ZNF20P17024 532 aa14.54□□□□□ -0.08
TSPAN4-205ENST00000397406 ADRA2CP18825 462 aa14.54□□□□□ -0.08
TSPAN4-205ENST00000397406 TUBG1P23258 451 aa14.54□□□□□ -0.08
TSPAN4-205ENST00000397406 THBS4P35443 961 aa14.54□□□□□ -0.08
TSPAN4-205ENST00000397406 DDOSTP39656 456 aa14.54□□□□□ -0.08
TSPAN4-205ENST00000397406 NKX6-1P78426 367 aaPredicted RBP14.54□□□□□ -0.08
TSPAN4-205ENST00000397406 ZNF529Q6P280 563 aa14.54□□□□□ -0.08
TSPAN4-205ENST00000397406 NR2C2APQ86WQ0 139 aa14.54□□□□□ -0.08
TSPAN4-205ENST00000397406 C1orf174Q8IYL3 243 aa14.54□□□□□ -0.08
TSPAN4-205ENST00000397406 NRGNQ92686 78 aa14.54□□□□□ -0.08
TSPAN4-205ENST00000397406 ITFG2Q969R8 447 aa14.54□□□□□ -0.08
TSPAN4-205ENST00000397406 MARS2Q96GW9 593 aaKnown RBP14.54□□□□□ -0.08
TSPAN4-205ENST00000397406 SLC30A2Q9BRI3 323 aa14.54□□□□□ -0.08
TSPAN4-205ENST00000397406 PLEKHA1Q9HB21 404 aa14.54□□□□□ -0.08
TSPAN4-205ENST00000397406 TCF7L1Q9HCS4 588 aa14.54□□□□□ -0.08
TSPAN4-205ENST00000397406 TUBG2Q9NRH3 451 aa14.54□□□□□ -0.08
TSPAN4-205ENST00000397406 SNTG1Q9NSN8 517 aa14.54□□□□□ -0.08
TSPAN4-205ENST00000397406 CELSR1Q9NYQ6 3014 aa14.54□□□□□ -0.08
TSPAN4-205ENST00000397406 SMIM30A4D0T7 59 aa14.53□□□□□ -0.08
TSPAN4-205ENST00000397406 TUBAL3A6NHL2 446 aa14.53□□□□□ -0.08
TSPAN4-205ENST00000397406 ATP6V1G2-DDX39BF2Z307 99 aa14.53□□□□□ -0.08
TSPAN4-205ENST00000397406 GNALP38405 381 aa14.53□□□□□ -0.08
TSPAN4-205ENST00000397406 BSPH1Q075Z2 132 aa14.53□□□□□ -0.08
TSPAN4-205ENST00000397406 RIPPLY1Q0D2K3 151 aa14.53□□□□□ -0.08
TSPAN4-205ENST00000397406 CEP78Q5JTW2 689 aa14.53□□□□□ -0.08
TSPAN4-205ENST00000397406 NCMAPQ5T1S8 102 aa14.53□□□□□ -0.08
TSPAN4-205ENST00000397406 ZBTB37Q5TC79 503 aa14.53□□□□□ -0.08
TSPAN4-205ENST00000397406 KRT74Q7RTS7 529 aa14.53□□□□□ -0.08
TSPAN4-205ENST00000397406 OR56B2PQ8NGI1 322 aa14.53□□□□□ -0.08
TSPAN4-205ENST00000397406 SLC25A46Q96AG3 418 aa14.53□□□□□ -0.08
TSPAN4-205ENST00000397406 DACH2Q96NX9 599 aa14.53□□□□□ -0.08
TSPAN4-205ENST00000397406 GFI1Q99684 422 aa14.53□□□□□ -0.08
TSPAN4-205ENST00000397406 BARHL1Q9BZE3 327 aa14.53□□□□□ -0.08
TSPAN4-205ENST00000397406 TPK1Q9H3S4 243 aa14.53□□□□□ -0.08
TSPAN4-205ENST00000397406 A0A0G2JK05 382 aa14.52□□□□□ -0.08
TSPAN4-205ENST00000397406 ABCD4O14678 606 aa14.52□□□□□ -0.08
TSPAN4-205ENST00000397406 NCR1O76036 304 aa14.52□□□□□ -0.08
TSPAN4-205ENST00000397406 RAB3BP20337 219 aa14.52□□□□□ -0.08
TSPAN4-205ENST00000397406 CAV3P56539 151 aa14.52□□□□□ -0.08
TSPAN4-205ENST00000397406 SNTB2Q13425 540 aaKnown RBP14.52□□□□□ -0.08
TSPAN4-205ENST00000397406 TMEM255AQ5JRV8 349 aa14.52□□□□□ -0.08
TSPAN4-205ENST00000397406 TMEM42Q69YG0 159 aa14.52□□□□□ -0.08
TSPAN4-205ENST00000397406 OR51A2Q8NGJ7 313 aa14.52□□□□□ -0.08
TSPAN4-205ENST00000397406 OR5D14Q8NGL3 314 aa14.52□□□□□ -0.08
TSPAN4-205ENST00000397406 KLF14Q8TD94 323 aaPredicted RBP14.52□□□□□ -0.08
TSPAN4-205ENST00000397406 PP6455Q8WZ26 134 aa14.52□□□□□ -0.08
TSPAN4-205ENST00000397406 CMBLQ96DG6 245 aa14.52□□□□□ -0.08
TSPAN4-205ENST00000397406 CHST5Q9GZS9 411 aa14.52□□□□□ -0.08
TSPAN4-205ENST00000397406 SLITRK2Q9H156 845 aa14.52□□□□□ -0.08
TSPAN4-205ENST00000397406 ZCCHC4Q9H5U6 513 aa14.52□□□□□ -0.08
TSPAN4-205ENST00000397406 PTTG2Q9NZH5 202 aa14.52□□□□□ -0.08
TSPAN4-205ENST00000397406 CCDC59Q9P031 241 aaKnown RBP14.52□□□□□ -0.08
TSPAN4-205ENST00000397406 CKLFQ9UBR5 152 aa14.52□□□□□ -0.08
TSPAN4-205ENST00000397406 SPEF1Q9Y4P9 236 aa14.52□□□□□ -0.08
TSPAN4-205ENST00000397406 ANKHD1Q8IWZ3 2542 aaKnown RBP14.52□□□□□ -0.08
TSPAN4-205ENST00000397406 TEP1Q99973 2627 aaKnown RBP14.52□□□□□ -0.09
TSPAN4-205ENST00000397406 CCDC168Q8NDH2 2452 aa14.51□□□□□ -0.09
TSPAN4-205ENST00000397406 GGT3PA6NGU5 568 aa14.51□□□□□ -0.09
TSPAN4-205ENST00000397406 CD300LBA8K4G0 201 aa14.51□□□□□ -0.09
TSPAN4-205ENST00000397406 MAS1P04201 325 aa14.51□□□□□ -0.09
TSPAN4-205ENST00000397406 RAC2P15153 192 aa14.51□□□□□ -0.09
TSPAN4-205ENST00000397406 MPV17P39210 176 aa14.51□□□□□ -0.09
TSPAN4-205ENST00000397406 OR10A3P58181 314 aa14.51□□□□□ -0.09
TSPAN4-205ENST00000397406 HNRNPA0Q13151 305 aaKnown RBP14.51□□□□□ -0.09
TSPAN4-205ENST00000397406 UTS2BQ765I0 119 aa14.51□□□□□ -0.09
TSPAN4-205ENST00000397406 OR5AS1Q8N127 324 aa14.51□□□□□ -0.09
TSPAN4-205ENST00000397406 OR1M1Q8NGA1 313 aa14.51□□□□□ -0.09
TSPAN4-205ENST00000397406 OR13C9Q8NGT0 318 aa14.51□□□□□ -0.09
TSPAN4-205ENST00000397406 HAVCR1Q96D42 359 aa14.51□□□□□ -0.09
TSPAN4-205ENST00000397406 SLIRPQ9GZT3 109 aaKnown RBP14.51□□□□□ -0.09
TSPAN4-205ENST00000397406 ESRP2Q9H6T0 727 aaKnown RBP14.51□□□□□ -0.09
TSPAN4-205ENST00000397406 CRIM1Q9NZV1 1036 aa14.51□□□□□ -0.09
TSPAN4-205ENST00000397406 KCNN3Q9UGI6 736 aa14.51□□□□□ -0.09
TSPAN4-205ENST00000397406 ITGB1BP2Q9UKP3 347 aa14.51□□□□□ -0.09
TSPAN4-205ENST00000397406 AK6Q9Y3D8 172 aaKnown RBP14.51□□□□□ -0.09
TSPAN4-205ENST00000397406 PMF1-BGLAPU3KQ54 211 aa14.51□□□□□ -0.09
TSPAN4-205ENST00000397406 IGKV1-9A0A0C4DH69 117 aa14.5□□□□□ -0.09
TSPAN4-205ENST00000397406 ZNF816-ZNF321PA0A0X1KG74 233 aa14.5□□□□□ -0.09
TSPAN4-205ENST00000397406 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.5□□□□□ -0.09
TSPAN4-205ENST00000397406 FAM221AA4D161 298 aa14.5□□□□□ -0.09
TSPAN4-205ENST00000397406 PDCD5O14737 125 aa14.5□□□□□ -0.09
TSPAN4-205ENST00000397406 SIAH2O43255 324 aa14.5□□□□□ -0.09
TSPAN4-205ENST00000397406 SULT1B1O43704 296 aa14.5□□□□□ -0.09
TSPAN4-205ENST00000397406 ALX3O95076 343 aa14.5□□□□□ -0.09
TSPAN4-205ENST00000397406 GLRXP35754 106 aa14.5□□□□□ -0.09
TSPAN4-205ENST00000397406 PPP3R1P63098 170 aa14.5□□□□□ -0.09
TSPAN4-205ENST00000397406 PSG7Q13046 419 aa14.5□□□□□ -0.09
TSPAN4-205ENST00000397406 MSMPQ1L6U9 139 aa14.5□□□□□ -0.09
TSPAN4-205ENST00000397406 ZNF718Q3SXZ3 478 aa14.5□□□□□ -0.09
TSPAN4-205ENST00000397406 MBNL2Q5VZF2 373 aaKnown RBP14.5□□□□□ -0.09
TSPAN4-205ENST00000397406 OR2T2Q6IF00 324 aa14.5□□□□□ -0.09
TSPAN4-205ENST00000397406 PIAS4Q8N2W9 510 aaPredicted RBP14.5□□□□□ -0.09
TSPAN4-205ENST00000397406 CSNK2A3Q8NEV1 391 aa14.5□□□□□ -0.09
TSPAN4-205ENST00000397406 NUP37Q8NFH4 326 aa14.5□□□□□ -0.09
TSPAN4-205ENST00000397406 UBASH3BQ8TF42 649 aa14.5□□□□□ -0.09
TSPAN4-205ENST00000397406 PLPPR2Q96GM1 343 aa14.5□□□□□ -0.09
TSPAN4-205ENST00000397406 RADILQ96JH8 1075 aa14.5□□□□□ -0.09
TSPAN4-205ENST00000397406 GMDSO60547 372 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 LILRA1O75019 489 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms