RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 ZNRD1Q9P1U0 126 aa7.18□□□□□ -1.26
CAPN3-208ENST00000397204 ONECUT1Q9UBC0 465 aa7.18□□□□□ -1.26
CAPN3-208ENST00000397204 PRPF19Q9UMS4 504 aaKnown RBP7.18□□□□□ -1.26
CAPN3-208ENST00000397204 TENM3Q9P273 2699 aa7.18□□□□□ -1.26
CAPN3-208ENST00000397204 IGHV3OR15-7A0A075B7D8 119 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 NPFFO15130 113 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 XRCC2O43543 280 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 GMNNO75496 209 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 DIRAS1O95057 198 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 GADD45GO95257 159 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 PAHP00439 452 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 COX4I1P13073 169 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 NCK1P16333 377 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 GABRA5P31644 462 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 UBE2E1P51965 193 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 EGR3Q06889 387 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 ACSM1Q08AH1 577 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 HERPUD1Q15011 391 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 TAF13Q15543 124 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 PCK2Q16822 640 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 LRRC10Q5BKY1 277 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 WDR38Q5JTN6 314 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 HIST2H2BDQ6DRA6 164 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 GLYATQ6IB77 296 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 DPY19L4Q7Z388 723 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 Q8N7P7 452 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 CYB561A3Q8NBI2 242 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 OR56B2PQ8NGI1 322 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 OR2T4Q8NH00 348 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 OR8S1Q8NH09 359 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 C8orf46Q8TAG6 207 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 FANK1Q8TC84 345 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 LRRC29Q8WV35 223 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 TNFRSF14Q92956 283 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 PPP1R14AQ96A00 147 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 MED30Q96HR3 178 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 DCTN5Q9BTE1 182 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 FAM234AQ9H0X4 552 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 DNTTIP1Q9H147 329 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 FGFR1OP2Q9NVK5 253 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 CD300AQ9UGN4 299 aa7.17□□□□□ -1.26
CAPN3-208ENST00000397204 SAMD4AQ9UPU9 718 aaKnown RBP7.17□□□□□ -1.26
CAPN3-208ENST00000397204 KMT2CQ8NEZ4 4911 aaKnown RBP7.16□□□□□ -1.26
CAPN3-208ENST00000397204 MEIOCA2RUB1 952 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 G3V4G9 280 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 CCDC22O60826 627 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 APOC1P02654 83 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 CFL1P23528 166 aaKnown RBP7.16□□□□□ -1.26
CAPN3-208ENST00000397204 SLC15A1P46059 708 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 GSSP48637 474 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 PRKXP51817 358 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 FAM3AP98173 230 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.16□□□□□ -1.26
CAPN3-208ENST00000397204 DBPQ10586 325 aaPredicted RBP7.16□□□□□ -1.26
CAPN3-208ENST00000397204 TSPAN31Q12999 210 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 SNCBQ16143 134 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 TEX30Q5JUR7 227 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 SLC35F1Q5T1Q4 408 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 NCR3LG1Q68D85 454 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 CGB2Q6NT52 195 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 PGBD2Q6P3X8 592 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 WDR82Q6UXN9 313 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 DCXRQ7Z4W1 244 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 WFDC3Q8IUB2 231 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 BEND2Q8NDZ0 799 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 SDR9C7Q8NEX9 313 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 PROKR2Q8NFJ6 384 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 OR1M1Q8NGA1 313 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 OR9Q1Q8NGQ5 310 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 GNPDA2Q8TDQ7 276 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 CFHR4Q92496 578 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 SGK3Q96BR1 496 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 PYURFQ96I23 114 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 COPS4Q9BT78 406 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 SEMA6AQ9H2E6 1030 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 PPA2Q9H2U2 334 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 METTL8Q9H825 291 aaKnown RBP7.16□□□□□ -1.26
CAPN3-208ENST00000397204 GORASP2Q9H8Y8 452 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 SIRT7Q9NRC8 400 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 CENPMQ9NSP4 180 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 HAO2Q9NYQ3 351 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 ADA2Q9NZK5 511 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 SF3B6Q9Y3B4 125 aaKnown RBP7.16□□□□□ -1.26
CAPN3-208ENST00000397204 N6AMT1Q9Y5N5 214 aa7.16□□□□□ -1.26
CAPN3-208ENST00000397204 A0A1B0GW55 424 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 TVP23AA6NH52 213 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.15□□□□□ -1.26
CAPN3-208ENST00000397204 M0R1W7 72 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 ZNF593O00488 134 aaPredicted RBP7.15□□□□□ -1.26
CAPN3-208ENST00000397204 ACOT8O14734 319 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 CDIPTO14735 213 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 DUX4L2P0CJ85 424 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 DUX4L3P0CJ86 424 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 DUX4L4P0CJ87 422 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 DUX4L5P0CJ88 424 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 DUX4L6P0CJ89 424 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 DUX4L7P0CJ90 424 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 AMY2BP19961 511 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 ANOS1P23352 680 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 FMO3P31513 532 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms