RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 TPPP2P59282 170 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 DUSP8Q13202 625 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 BTN1A1Q13410 526 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 DMRTC1Q5HYR2 192 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 KTI12Q96EK9 354 aaPredicted RBP6.48□□□□□ -1.37
UPF2-203ENST00000397053 SMIM7Q9BQ49 75 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 GON7Q9BXV9 100 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 CMC2Q9NRP2 79 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 RABAC1Q9UI14 185 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 NEURL4Q96JN8 1562 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 DUOX1Q9NRD9 1551 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 CACNA1FO60840 1977 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 TRAV38-1A0A0B4J264 116 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 H3BP45 60 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 PCBP3P57721 371 aaKnown RBP6.48□□□□□ -1.37
UPF2-203ENST00000397053 ZNF121P58317 390 aaPredicted RBP6.48□□□□□ -1.37
UPF2-203ENST00000397053 DHODHQ02127 395 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 TFF2Q03403 129 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 LSAMPQ13449 338 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 JMJD6Q6NYC1 403 aaPredicted RBP6.48□□□□□ -1.37
UPF2-203ENST00000397053 ABI3BPQ7Z7G0 1075 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 CALHM3Q86XJ0 350 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 MFSD4AQ8N468 514 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 SIGLECL1Q8N7X8 197 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 OR5M8Q8NGP6 311 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 LRRC29Q8WV35 223 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 OR5M11Q96RB7 305 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 MRPL22Q9NWU5 206 aaKnown RBP6.48□□□□□ -1.37
UPF2-203ENST00000397053 COA4Q9NYJ1 87 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 EMCNQ9ULC0 261 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 AUP1Q9Y679 476 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 POMT1Q9Y6A1 747 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 MROH2AA6NES4 1674 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 IGLV3-10A0A075B6K4 115 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 A0A087WV62 115 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 OR2W5A6NFC9 320 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 ALG1L2C9J202 215 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 E5RGE8 158 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 ADAM10O14672 748 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 GATCO43716 136 aaKnown RBP6.48□□□□□ -1.37
UPF2-203ENST00000397053 SEMA7AO75326 666 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 DUS4LO95620 317 aaKnown RBP6.48□□□□□ -1.37
UPF2-203ENST00000397053 T-ENOLP0DO92 83 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 FUT3P21217 361 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 HYAL1Q12794 435 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 KIAA0141Q14154 515 aaPredicted RBP6.48□□□□□ -1.37
UPF2-203ENST00000397053 ZNF273Q14593 569 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 ZNF787Q6DD87 383 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 C19orf35Q6ZS72 473 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 GLCCI1Q86VQ1 547 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 TEX29Q8N6K0 151 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 OR5D13Q8NGL4 314 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 PP6455Q8WZ26 134 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 EXTL1Q92935 676 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 GPR78Q96P69 363 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 SLC25A22Q9H936 323 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 CHODLQ9H9P2 273 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 OR1A1Q9P1Q5 309 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 SLC22A13Q9Y226 551 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 GPR31O00270 319 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 NME2P1O60361 137 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 FCGR3BO75015 233 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 PDGFAP04085 211 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 MMP7P09237 267 aaPredicted RBP6.48□□□□□ -1.37
UPF2-203ENST00000397053 AREGP15514 252 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 EPHA8P29322 1005 aaPredicted RBP6.48□□□□□ -1.37
UPF2-203ENST00000397053 OR2B8PP59922 312 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 ACSM5Q6NUN0 579 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 CLEC2AQ6UVW9 174 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 PRSS45Q7RTY3 260 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 FADS6Q8N9I5 356 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 ZFP62Q8NB50 900 aaPredicted RBP6.48□□□□□ -1.37
UPF2-203ENST00000397053 PXT1Q8NFP0 134 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 TM4SF19Q96DZ7 209 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 ZNF764Q96H86 408 aaPredicted RBP6.48□□□□□ -1.37
UPF2-203ENST00000397053 CDX2Q99626 313 aaPredicted RBP6.48□□□□□ -1.37
UPF2-203ENST00000397053 ARHGDIGQ99819 225 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 MS4A5Q9H3V2 200 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 POFUT1Q9H488 388 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 ACER3Q9NUN7 267 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 R4GMQ9 66 aa6.48□□□□□ -1.37
UPF2-203ENST00000397053 KIAA1210Q9ULL0 1709 aa6.47□□□□□ -1.37
UPF2-203ENST00000397053 KIF20BQ96Q89 1820 aa6.47□□□□□ -1.37
UPF2-203ENST00000397053 ATP6V1G2-DDX39BF2Z307 99 aa6.47□□□□□ -1.37
UPF2-203ENST00000397053 HAX1O00165 279 aa6.47□□□□□ -1.37
UPF2-203ENST00000397053 FABP7O15540 132 aa6.47□□□□□ -1.37
UPF2-203ENST00000397053 SEMG1P04279 462 aa6.47□□□□□ -1.37
UPF2-203ENST00000397053 CA6P23280 308 aa6.47□□□□□ -1.37
UPF2-203ENST00000397053 RPL30P62888 115 aaKnown RBP6.47□□□□□ -1.37
UPF2-203ENST00000397053 SIGLEC14Q08ET2 396 aa6.47□□□□□ -1.37
UPF2-203ENST00000397053 FNDC7Q5VTL7 733 aa6.47□□□□□ -1.37
UPF2-203ENST00000397053 B3GNTL1Q67FW5 361 aaPredicted RBP6.47□□□□□ -1.37
UPF2-203ENST00000397053 CYHR1Q6ZMK1 362 aa6.47□□□□□ -1.37
UPF2-203ENST00000397053 RBPMS2Q6ZRY4 209 aaKnown RBP6.47□□□□□ -1.37
UPF2-203ENST00000397053 TGIF2LXQ8IUE1 241 aa6.47□□□□□ -1.37
UPF2-203ENST00000397053 PELI3Q8N2H9 469 aa6.47□□□□□ -1.37
UPF2-203ENST00000397053 NECAP1Q8NC96 275 aa6.47□□□□□ -1.37
UPF2-203ENST00000397053 SLC24A4Q8NFF2 622 aa6.47□□□□□ -1.37
UPF2-203ENST00000397053 OR2M3Q8NG83 312 aa6.47□□□□□ -1.37
UPF2-203ENST00000397053 OR2A5Q96R48 311 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms