RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 LIPGQ9Y5X9 500 aa7.59□□□□□ -1.2
NDE1-202ENST00000396355 A8MXE2 369 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 CLDN34H7C241 214 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 ATXN7O15265 892 aaPredicted RBP7.58□□□□□ -1.2
NDE1-202ENST00000396355 TRAF3IP2O43734 574 aaPredicted RBP7.58□□□□□ -1.2
NDE1-202ENST00000396355 RCBTB2O95199 551 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 TACSTD2P09758 323 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 GNB3P16520 340 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 SIRPAP78324 504 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 SPOCK1Q08629 439 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 SPIN3Q5JUX0 258 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 SLC35D2Q76EJ3 337 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 MEPCEQ7L2J0 689 aaKnown RBP7.58□□□□□ -1.2
NDE1-202ENST00000396355 OR5AK2Q8NH90 309 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 GPBAR1Q8TDU6 330 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 SLC38A5Q8WUX1 472 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 R3HDM4Q96D70 268 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 ADAP2Q9NPF8 381 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 TNFSF18Q9UNG2 199 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 MTCL1Q9Y4B5 1905 aaKnown RBP7.58□□□□□ -1.2
NDE1-202ENST00000396355 LRRK1Q38SD2 2015 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 CEP295Q9C0D2 2601 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 IFITM5A6NNB3 132 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 TOX3O15405 576 aaPredicted RBP7.58□□□□□ -1.2
NDE1-202ENST00000396355 RAMP1O60894 148 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 HLA-DQB1P01920 261 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 CTSLP07711 333 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 LINC00271P0C7V0 271 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 GLB1P16278 677 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 TACR3P29371 465 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 OR10J1P30954 320 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 FOXC1Q12948 553 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 RAB32Q13637 225 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 CRMP1Q14194 572 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 WBP2NLQ6ICG8 309 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 MRM1Q6IN84 353 aaKnown RBP7.58□□□□□ -1.2
NDE1-202ENST00000396355 CFAP161Q6P656 301 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 UNQ5815/PRO19632Q6UWF5 114 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 LRRC70Q7Z2Q7 622 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 RAB42Q8N4Z0 105 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 FAM181AQ8N9Y4 354 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 MARCH1Q8TCQ1 289 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 PRRT1Q99946 306 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 SLC25A21Q9BQT8 299 aaPredicted RBP7.58□□□□□ -1.2
NDE1-202ENST00000396355 CHST8Q9H2A9 424 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 OR52D1Q9H346 318 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 CHODLQ9H9P2 273 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 B4GALT6Q9UBX8 382 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 CBLCQ9ULV8 474 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 CCL26Q9Y258 94 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 NTNG1Q9Y2I2 539 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 SNRNP200O75643 2136 aaKnown RBP7.58□□□□□ -1.2
NDE1-202ENST00000396355 KIAA1549LQ6ZVL6 1849 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 E9PQ18 207 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 SURF4O15260 269 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 GCM2O75603 506 aaPredicted RBP7.58□□□□□ -1.2
NDE1-202ENST00000396355 HOXC4P09017 264 aaPredicted RBP7.58□□□□□ -1.2
NDE1-202ENST00000396355 SLC35G6P0C7Q6 338 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 RPS27P42677 84 aaKnown RBP7.58□□□□□ -1.2
NDE1-202ENST00000396355 SLC35D3Q5M8T2 416 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 PRR18Q8N4B5 295 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 C16orf58Q96GQ5 468 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 SIGLEC11Q96RL6 698 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 TBL1XR1Q9BZK7 514 aa7.58□□□□□ -1.2
NDE1-202ENST00000396355 SIDT1Q9NXL6 827 aaKnown RBP7.58□□□□□ -1.2
NDE1-202ENST00000396355 SIRT4Q9Y6E7 314 aaPredicted RBP7.58□□□□□ -1.2
NDE1-202ENST00000396355 A0A1W2PR80 420 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 NPIPB8E9PQR5 432 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 SLC31A1O15431 190 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 RAE1P78406 368 aaKnown RBP7.57□□□□□ -1.2
NDE1-202ENST00000396355 DOC2BQ14184 412 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 CARD17Q5XLA6 110 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 TRAPPC6BQ86SZ2 158 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 SIGLECL1Q8N7X8 197 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 STARD4Q96DR4 205 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 NPDC1Q9NQX5 325 aaPredicted RBP7.57□□□□□ -1.2
NDE1-202ENST00000396355 ARL2-SNX15V9GYD0 113 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 NOTCH4Q99466 2003 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 CCDC187A0A096LP49 1063 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 A0A1B0GV72 72 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 C4orf47A7E2U8 309 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 OR7C2O60412 319 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 SPINK4O60575 86 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 VAMP5O95183 116 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 PAPLNO95428 1278 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 H2BFMP0C1H6 154 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 FOLR1P15328 257 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 SPINT3P49223 89 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 CD81P60033 236 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 BDH1Q02338 343 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 PLAC9Q5JTB6 97 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 TPGS2Q68CL5 300 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 C22orf39Q6P5X5 142 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 HIST3H2BBQ8N257 126 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 ZNF563Q8TA94 476 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 TSLPQ969D9 159 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 ZNF587Q96SQ5 575 aaPredicted RBP7.57□□□□□ -1.2
NDE1-202ENST00000396355 RXFP3Q9NSD7 469 aa7.57□□□□□ -1.2
NDE1-202ENST00000396355 AURKAIP1Q9NWT8 199 aaPredicted RBP7.57□□□□□ -1.2
NDE1-202ENST00000396355 CGGBP1Q9UFW8 167 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms