RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 DHRS2Q13268 280 aa14.72□□□□□ -0.05
NUP50-202ENST00000396096 GK2Q14410 553 aaPredicted RBP14.72□□□□□ -0.05
NUP50-202ENST00000396096 NKPD1Q17RQ9 610 aa14.72□□□□□ -0.05
NUP50-202ENST00000396096 SLC22A6Q4U2R8 563 aa14.72□□□□□ -0.05
NUP50-202ENST00000396096 LY6G6FQ5SQ64 297 aa14.72□□□□□ -0.05
NUP50-202ENST00000396096 THOC7Q6I9Y2 204 aaKnown RBP14.72□□□□□ -0.05
NUP50-202ENST00000396096 OR52W1Q6IF63 320 aa14.72□□□□□ -0.05
NUP50-202ENST00000396096 JMJD6Q6NYC1 403 aaPredicted RBP14.72□□□□□ -0.05
NUP50-202ENST00000396096 DRAM2Q6UX65 266 aa14.72□□□□□ -0.05
NUP50-202ENST00000396096 CD163Q86VB7 1156 aa14.72□□□□□ -0.05
NUP50-202ENST00000396096 CST11Q9H112 138 aa14.72□□□□□ -0.05
NUP50-202ENST00000396096 OR10A2Q9H208 303 aa14.72□□□□□ -0.05
NUP50-202ENST00000396096 TMEM38BQ9NVV0 291 aa14.72□□□□□ -0.05
NUP50-202ENST00000396096 CCDC187A0A096LP49 1063 aa14.71□□□□□ -0.05
NUP50-202ENST00000396096 FOXI3A8MTJ6 420 aaPredicted RBP14.71□□□□□ -0.05
NUP50-202ENST00000396096 LINC01387J3KSC0 135 aa14.71□□□□□ -0.05
NUP50-202ENST00000396096 SYNGR3O43761 229 aa14.71□□□□□ -0.05
NUP50-202ENST00000396096 CXCL13O43927 109 aa14.71□□□□□ -0.05
NUP50-202ENST00000396096 HLA-GP17693 338 aa14.71□□□□□ -0.05
NUP50-202ENST00000396096 ZBTB25P24278 435 aa14.71□□□□□ -0.05
NUP50-202ENST00000396096 HRH1P35367 487 aa14.71□□□□□ -0.05
NUP50-202ENST00000396096 PTGFRP43088 359 aa14.71□□□□□ -0.05
NUP50-202ENST00000396096 GFRA1P56159 465 aa14.71□□□□□ -0.05
NUP50-202ENST00000396096 TMEM50BP56557 158 aa14.71□□□□□ -0.05
NUP50-202ENST00000396096 RPS27AP62979 156 aaKnown RBP14.71□□□□□ -0.05
NUP50-202ENST00000396096 FOXO1Q12778 655 aa14.71□□□□□ -0.05
NUP50-202ENST00000396096 UBE2V2Q15819 145 aa14.71□□□□□ -0.05
NUP50-202ENST00000396096 KRTAP27-1Q3LI81 207 aa14.71□□□□□ -0.05
NUP50-202ENST00000396096 ACTBL2Q562R1 376 aa14.71□□□□□ -0.05
NUP50-202ENST00000396096 WIPI1Q5MNZ9 446 aaPredicted RBP14.71□□□□□ -0.05
NUP50-202ENST00000396096 PLA2G2CQ5R387 149 aa14.71□□□□□ -0.05
NUP50-202ENST00000396096 RIPPLY2Q5TAB7 128 aa14.71□□□□□ -0.05
NUP50-202ENST00000396096 SLC16A14Q7RTX9 510 aa14.71□□□□□ -0.05
NUP50-202ENST00000396096 DTX1Q86Y01 620 aa14.71□□□□□ -0.05
NUP50-202ENST00000396096 OR10D3Q8NH80 312 aa14.71□□□□□ -0.05
NUP50-202ENST00000396096 CITED4Q96RK1 184 aa14.71□□□□□ -0.05
NUP50-202ENST00000396096 OCSTAMPQ9BR26 566 aa14.71□□□□□ -0.05
NUP50-202ENST00000396096 DOCK10Q96BY6 2186 aa14.71□□□□□ -0.06
NUP50-202ENST00000396096 SGCEO43556 437 aa14.7□□□□□ -0.06
NUP50-202ENST00000396096 CD8AP01732 235 aa14.7□□□□□ -0.06
NUP50-202ENST00000396096 CSN2P05814 226 aa14.7□□□□□ -0.06
NUP50-202ENST00000396096 CBX5P45973 191 aa14.7□□□□□ -0.06
NUP50-202ENST00000396096 CLDN15P56746 228 aa14.7□□□□□ -0.06
NUP50-202ENST00000396096 GMFBP60983 142 aa14.7□□□□□ -0.06
NUP50-202ENST00000396096 OC90Q02509 493 aaPredicted RBP14.7□□□□□ -0.06
NUP50-202ENST00000396096 VAX1Q5SQQ9 334 aa14.7□□□□□ -0.06
NUP50-202ENST00000396096 C11orf88Q6PI97 169 aa14.7□□□□□ -0.06
NUP50-202ENST00000396096 AAED1Q7RTV5 226 aa14.7□□□□□ -0.06
NUP50-202ENST00000396096 LYG2Q86SG7 212 aa14.7□□□□□ -0.06
NUP50-202ENST00000396096 RTN4RL2Q86UN3 420 aa14.7□□□□□ -0.06
NUP50-202ENST00000396096 STEAP2Q8NFT2 490 aa14.7□□□□□ -0.06
NUP50-202ENST00000396096 OR5M8Q8NGP6 311 aa14.7□□□□□ -0.06
NUP50-202ENST00000396096 GPR87Q9BY21 358 aa14.7□□□□□ -0.06
NUP50-202ENST00000396096 BANF2Q9H503 90 aa14.7□□□□□ -0.06
NUP50-202ENST00000396096 PINLYPA6NC86 204 aa14.69□□□□□ -0.06
NUP50-202ENST00000396096 RFPL4AA6NLU0 287 aa14.69□□□□□ -0.06
NUP50-202ENST00000396096 RFPL4AL1F8VTS6 287 aa14.69□□□□□ -0.06
NUP50-202ENST00000396096 TERTO14746 1132 aaKnown RBP14.69□□□□□ -0.06
NUP50-202ENST00000396096 CYTIPO60759 359 aa14.69□□□□□ -0.06
NUP50-202ENST00000396096 CRTAPO75718 401 aaPredicted RBP14.69□□□□□ -0.06
NUP50-202ENST00000396096 DBHP09172 617 aa14.69□□□□□ -0.06
NUP50-202ENST00000396096 CD59P13987 128 aa14.69□□□□□ -0.06
NUP50-202ENST00000396096 FAHP16930 419 aa14.69□□□□□ -0.06
NUP50-202ENST00000396096 POU3F2P20265 443 aaPredicted RBP14.69□□□□□ -0.06
NUP50-202ENST00000396096 S100A11P31949 105 aa14.69□□□□□ -0.06
NUP50-202ENST00000396096 SCRN3Q0VDG4 424 aa14.69□□□□□ -0.06
NUP50-202ENST00000396096 HAS2Q92819 552 aa14.69□□□□□ -0.06
NUP50-202ENST00000396096 MARVELD3Q96A59 401 aa14.69□□□□□ -0.06
NUP50-202ENST00000396096 SGK3Q96BR1 496 aa14.69□□□□□ -0.06
NUP50-202ENST00000396096 TM2D1Q9BX74 207 aa14.69□□□□□ -0.06
NUP50-202ENST00000396096 CRLF2Q9HC73 371 aa14.69□□□□□ -0.06
NUP50-202ENST00000396096 KCNN3Q9UGI6 736 aa14.69□□□□□ -0.06
NUP50-202ENST00000396096 BOKQ9UMX3 212 aaPredicted RBP14.69□□□□□ -0.06
NUP50-202ENST00000396096 PIGLQ9Y2B2 252 aa14.69□□□□□ -0.06
NUP50-202ENST00000396096 A0A1W2PP11 408 aa14.69□□□□□ -0.06
NUP50-202ENST00000396096 OR6C6A6NF89 314 aa14.69□□□□□ -0.06
NUP50-202ENST00000396096 C21orf140B9A014 251 aa14.69□□□□□ -0.06
NUP50-202ENST00000396096 TRAPPC6AO75865 159 aa14.69□□□□□ -0.06
NUP50-202ENST00000396096 RPA2P15927 270 aa14.69□□□□□ -0.06
NUP50-202ENST00000396096 GDF1P27539 372 aa14.69□□□□□ -0.06
NUP50-202ENST00000396096 CD34P28906 385 aa14.69□□□□□ -0.06
NUP50-202ENST00000396096 STARP49675 285 aa14.69□□□□□ -0.06
NUP50-202ENST00000396096 HLXQ14774 488 aaPredicted RBP14.69□□□□□ -0.06
NUP50-202ENST00000396096 C3P1Q6ZMU1 363 aa14.69□□□□□ -0.06
NUP50-202ENST00000396096 TMUB2Q71RG4 321 aa14.69□□□□□ -0.06
NUP50-202ENST00000396096 HOGA1Q86XE5 327 aa14.69□□□□□ -0.06
NUP50-202ENST00000396096 OR4K15Q8NH41 348 aa14.69□□□□□ -0.06
NUP50-202ENST00000396096 OR1F12Q8NHA8 337 aa14.69□□□□□ -0.06
NUP50-202ENST00000396096 ROBO4Q8WZ75 1007 aa14.69□□□□□ -0.06
NUP50-202ENST00000396096 CPNE4Q96A23 557 aaPredicted RBP14.69□□□□□ -0.06
NUP50-202ENST00000396096 THOC3Q96J01 351 aaKnown RBP14.69□□□□□ -0.06
NUP50-202ENST00000396096 GSX2Q9BZM3 304 aa14.69□□□□□ -0.06
NUP50-202ENST00000396096 FAM117AQ9C073 453 aa14.69□□□□□ -0.06
NUP50-202ENST00000396096 FOXJ2Q9P0K8 574 aa14.69□□□□□ -0.06
NUP50-202ENST00000396096 A0A1W2PNU3 283 aaPredicted RBP14.68□□□□□ -0.06
NUP50-202ENST00000396096 OR2AT4A6NND4 320 aa14.68□□□□□ -0.06
NUP50-202ENST00000396096 CEACAM18A8MTB9 384 aa14.68□□□□□ -0.06
NUP50-202ENST00000396096 ARPC5O15511 151 aa14.68□□□□□ -0.06
NUP50-202ENST00000396096 RAD51DO75771 328 aa14.68□□□□□ -0.06
NUP50-202ENST00000396096 HLA-AP01891 365 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms