RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 ZANQ9Y493 2812 aa14.01□□□□□ -0.17
CXCL1-201ENST00000395761 A0A087WXM4 84 aa14□□□□□ -0.17
CXCL1-201ENST00000395761 MAGEA13PA6NCF6 341 aa14□□□□□ -0.17
CXCL1-201ENST00000395761 TRIM64CA6NLI5 447 aa14□□□□□ -0.17
CXCL1-201ENST00000395761 LOC110117498-PIK3R3F6TDL0 507 aa14□□□□□ -0.17
CXCL1-201ENST00000395761 PPIHO43447 177 aaKnown RBP14□□□□□ -0.17
CXCL1-201ENST00000395761 TACSTD2P09758 323 aa14□□□□□ -0.17
CXCL1-201ENST00000395761 USF1P22415 310 aaPredicted RBP14□□□□□ -0.17
CXCL1-201ENST00000395761 CFL1P23528 166 aaKnown RBP14□□□□□ -0.17
CXCL1-201ENST00000395761 ACKR3P25106 362 aa14□□□□□ -0.17
CXCL1-201ENST00000395761 TMEM33P57088 247 aa14□□□□□ -0.17
CXCL1-201ENST00000395761 ACTA2P62736 377 aa14□□□□□ -0.17
CXCL1-201ENST00000395761 ACTG2P63267 376 aa14□□□□□ -0.17
CXCL1-201ENST00000395761 LOXL1Q08397 574 aaPredicted RBP14□□□□□ -0.17
CXCL1-201ENST00000395761 MAB21L1Q13394 359 aa14□□□□□ -0.17
CXCL1-201ENST00000395761 HFEQ30201 348 aa14□□□□□ -0.17
CXCL1-201ENST00000395761 TMPRSS11AQ6ZMR5 421 aa14□□□□□ -0.17
CXCL1-201ENST00000395761 SPARTQ8N0X7 666 aa14□□□□□ -0.17
CXCL1-201ENST00000395761 KLHL36Q8N4N3 616 aa14□□□□□ -0.17
CXCL1-201ENST00000395761 ZNF485Q8NCK3 441 aa14□□□□□ -0.17
CXCL1-201ENST00000395761 TSPAN14Q8NG11 270 aa14□□□□□ -0.17
CXCL1-201ENST00000395761 OR51E1Q8TCB6 317 aa14□□□□□ -0.17
CXCL1-201ENST00000395761 MEGF10Q96KG7 1140 aa14□□□□□ -0.17
CXCL1-201ENST00000395761 MRPL15Q9P015 296 aaKnown RBP14□□□□□ -0.17
CXCL1-201ENST00000395761 NUFIP1Q9UHK0 495 aaKnown RBP14□□□□□ -0.17
CXCL1-201ENST00000395761 OR52A1Q9UKL2 312 aa14□□□□□ -0.17
CXCL1-201ENST00000395761 SLC22A13Q9Y226 551 aa14□□□□□ -0.17
CXCL1-201ENST00000395761 LRP5LA4QPB2 252 aa13.99□□□□□ -0.17
CXCL1-201ENST00000395761 WNT9BO14905 357 aa13.99□□□□□ -0.17
CXCL1-201ENST00000395761 LY6G6DO95868 133 aa13.99□□□□□ -0.17
CXCL1-201ENST00000395761 TTRP02766 147 aa13.99□□□□□ -0.17
CXCL1-201ENST00000395761 TNFRSF1AP19438 455 aa13.99□□□□□ -0.17
CXCL1-201ENST00000395761 DDOSTP39656 456 aa13.99□□□□□ -0.17
CXCL1-201ENST00000395761 PSMB10P40306 273 aa13.99□□□□□ -0.17
CXCL1-201ENST00000395761 GPR6P46095 362 aaPredicted RBP13.99□□□□□ -0.17
CXCL1-201ENST00000395761 CDH15P55291 814 aa13.99□□□□□ -0.17
CXCL1-201ENST00000395761 OR12D2P58182 307 aa13.99□□□□□ -0.17
CXCL1-201ENST00000395761 KRTAP1-1Q07627 177 aa13.99□□□□□ -0.17
CXCL1-201ENST00000395761 OR8G1Q15617 311 aa13.99□□□□□ -0.17
CXCL1-201ENST00000395761 OR8B8Q15620 311 aa13.99□□□□□ -0.17
CXCL1-201ENST00000395761 TBCEQ15813 527 aaPredicted RBP13.99□□□□□ -0.17
CXCL1-201ENST00000395761 AVPI1Q5T686 147 aa13.99□□□□□ -0.17
CXCL1-201ENST00000395761 BCL2L15Q5TBC7 163 aa13.99□□□□□ -0.17
CXCL1-201ENST00000395761 ELMOD2Q8IZ81 293 aa13.99□□□□□ -0.17
CXCL1-201ENST00000395761 SVOPQ8N4V2 548 aa13.99□□□□□ -0.17
CXCL1-201ENST00000395761 HAVCR2Q8TDQ0 301 aa13.99□□□□□ -0.17
CXCL1-201ENST00000395761 RORBQ92753 470 aa13.99□□□□□ -0.17
CXCL1-201ENST00000395761 RNF166Q96A37 237 aaPredicted RBP13.99□□□□□ -0.17
CXCL1-201ENST00000395761 CCDC90BQ9GZT6 254 aa13.99□□□□□ -0.17
CXCL1-201ENST00000395761 GCM1Q9NP62 436 aa13.99□□□□□ -0.17
CXCL1-201ENST00000395761 ACOXLQ9NUZ1 547 aa13.99□□□□□ -0.17
CXCL1-201ENST00000395761 GNG8Q9UK08 70 aa13.99□□□□□ -0.17
CXCL1-201ENST00000395761 RHBDD3Q9Y3P4 386 aa13.99□□□□□ -0.17
CXCL1-201ENST00000395761 SNX5Q9Y5X3 404 aa13.99□□□□□ -0.17
CXCL1-201ENST00000395761 CR1P17927 2039 aa13.98□□□□□ -0.17
CXCL1-201ENST00000395761 A0A0U1RQV5 110 aa13.98□□□□□ -0.17
CXCL1-201ENST00000395761 IGLV3-1P01715 115 aa13.98□□□□□ -0.17
CXCL1-201ENST00000395761 PCMT1P22061 227 aa13.98□□□□□ -0.17
CXCL1-201ENST00000395761 PMELP40967 661 aa13.98□□□□□ -0.17
CXCL1-201ENST00000395761 SRP9P49458 86 aaKnown RBP13.98□□□□□ -0.17
CXCL1-201ENST00000395761 EMX1Q04741 257 aaPredicted RBP13.98□□□□□ -0.17
CXCL1-201ENST00000395761 MRPL28Q13084 256 aaKnown RBP13.98□□□□□ -0.17
CXCL1-201ENST00000395761 CLEC9AQ6UXN8 241 aa13.98□□□□□ -0.17
CXCL1-201ENST00000395761 Q71RC1 249 aaPredicted RBP13.98□□□□□ -0.17
CXCL1-201ENST00000395761 BIVMQ86UB2 503 aa13.98□□□□□ -0.17
CXCL1-201ENST00000395761 CATSPERDQ86XM0 798 aa13.98□□□□□ -0.17
CXCL1-201ENST00000395761 ZNF420Q8TAQ5 688 aaPredicted RBP13.98□□□□□ -0.17
CXCL1-201ENST00000395761 FAM71F1Q96KD3 344 aaPredicted RBP13.98□□□□□ -0.17
CXCL1-201ENST00000395761 C4orf36Q96KX1 117 aa13.98□□□□□ -0.17
CXCL1-201ENST00000395761 ADAT1Q9BUB4 502 aaKnown RBP13.98□□□□□ -0.17
CXCL1-201ENST00000395761 MND1Q9BWT6 205 aa13.98□□□□□ -0.17
CXCL1-201ENST00000395761 SLC22A4Q9H015 551 aa13.98□□□□□ -0.17
CXCL1-201ENST00000395761 NARFLQ9H6Q4 476 aa13.98□□□□□ -0.17
CXCL1-201ENST00000395761 ISG20L2Q9H9L3 353 aaKnown RBP13.98□□□□□ -0.17
CXCL1-201ENST00000395761 GPR84Q9NQS5 396 aa13.98□□□□□ -0.17
CXCL1-201ENST00000395761 BABAM2Q9NXR7 383 aa13.98□□□□□ -0.17
CXCL1-201ENST00000395761 ZNF391Q9UJN7 358 aa13.98□□□□□ -0.17
CXCL1-201ENST00000395761 PPP1R3CQ9UQK1 317 aa13.98□□□□□ -0.17
CXCL1-201ENST00000395761 LSM2Q9Y333 95 aaKnown RBP13.98□□□□□ -0.17
CXCL1-201ENST00000395761 ANKRD30BLA7E2S9 258 aa13.97□□□□□ -0.17
CXCL1-201ENST00000395761 J3QLW9 94 aa13.97□□□□□ -0.17
CXCL1-201ENST00000395761 MYL12BO14950 172 aa13.97□□□□□ -0.17
CXCL1-201ENST00000395761 GMDSO60547 372 aa13.97□□□□□ -0.17
CXCL1-201ENST00000395761 ZNF19P17023 458 aa13.97□□□□□ -0.17
CXCL1-201ENST00000395761 IL2RGP31785 369 aa13.97□□□□□ -0.17
CXCL1-201ENST00000395761 CD200P41217 278 aa13.97□□□□□ -0.17
CXCL1-201ENST00000395761 WNT4P56705 351 aa13.97□□□□□ -0.17
CXCL1-201ENST00000395761 ACSM1Q08AH1 577 aa13.97□□□□□ -0.17
CXCL1-201ENST00000395761 ODF4Q2M2E3 257 aa13.97□□□□□ -0.17
CXCL1-201ENST00000395761 TMEM249Q2WGJ8 235 aa13.97□□□□□ -0.17
CXCL1-201ENST00000395761 OR2G6Q5TZ20 316 aa13.97□□□□□ -0.17
CXCL1-201ENST00000395761 PRAMEF6Q5VXH4 476 aa13.97□□□□□ -0.17
CXCL1-201ENST00000395761 FDX2Q6P4F2 183 aa13.97□□□□□ -0.17
CXCL1-201ENST00000395761 FAM220AQ7Z4H9 259 aa13.97□□□□□ -0.17
CXCL1-201ENST00000395761 MOGAT3Q86VF5 341 aa13.97□□□□□ -0.17
CXCL1-201ENST00000395761 COMMD2Q86X83 199 aa13.97□□□□□ -0.17
CXCL1-201ENST00000395761 PRSS35Q8N3Z0 413 aa13.97□□□□□ -0.17
CXCL1-201ENST00000395761 CSNK2A3Q8NEV1 391 aa13.97□□□□□ -0.17
CXCL1-201ENST00000395761 PELI1Q96FA3 418 aa13.97□□□□□ -0.17
CXCL1-201ENST00000395761 ISYNA1Q9NPH2 558 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms