RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 TEX36Q5VZQ5 186 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 RUSC1-AS1Q66K80 236 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 WDR82Q6UXN9 313 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 BRD3OSQ6XYD6 125 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 KRT74Q7RTS7 529 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 C1orf87Q8N0U7 546 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 PARP8Q8N3A8 854 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 OR1M1Q8NGA1 313 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 OR8B12Q8NGG6 310 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 OR8B3Q8NGG8 313 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 OR11L1Q8NGX0 322 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 THEM6Q8WUY1 208 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 HPSE2Q8WWQ2 592 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 OR8B2Q96RD0 313 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 TEAD3Q99594 435 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 SLC22A4Q9H015 551 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 TLNRD1Q9H1K6 362 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 WDR13Q9H1Z4 485 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 PRDM13Q9H4Q3 707 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 ZMAT3Q9HA38 289 aaKnown RBP7.33□□□□□ -1.24
ATG4A-205ENST00000394892 FN3KRPQ9HA64 309 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 CLN8Q9UBY8 286 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 MGAM2Q2M2H8 2515 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 TRAV40A0A0B4J280 105 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 OOEPA6NGQ2 149 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 GNGT2O14610 69 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 PRODHO43272 600 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 ADAM20O43506 726 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 SRSF10O75494 262 aaKnown RBP7.32□□□□□ -1.24
ATG4A-205ENST00000394892 IGLV3-1P01715 115 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 HMGN1P05114 100 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 LYNP07948 512 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 MRPL3P09001 348 aaKnown RBP7.32□□□□□ -1.24
ATG4A-205ENST00000394892 HKR1P10072 659 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 ANXA8P13928 327 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 PRTN3P24158 256 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 DCTDP32321 178 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 POLR2IP36954 125 aaKnown RBP7.32□□□□□ -1.24
ATG4A-205ENST00000394892 CFHR2P36980 270 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 DDOSTP39656 456 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 SLC15A1P46059 708 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 DLX1P56177 255 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 PRB3Q04118 309 aaPredicted RBP7.32□□□□□ -1.24
ATG4A-205ENST00000394892 APOFQ13790 326 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 TIGD6Q17RP2 521 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 DEFB112Q30KQ8 113 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 GFOD2Q3B7J2 385 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 DNAL1Q4LDG9 190 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 FAM76BQ5HYJ3 339 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 AADACL4Q5VUY2 407 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 TREML4Q6UXN2 200 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 RHOUQ7L0Q8 258 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 SHFQ7M4L6 423 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 SPERTQ8NA61 448 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 LRRC29Q8WV35 223 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 OR5P3Q8WZ94 311 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 RPL3LQ92901 407 aaKnown RBP7.32□□□□□ -1.24
ATG4A-205ENST00000394892 CCL13Q99616 98 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 MRI1Q9BV20 369 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 SIRPDQ9H106 197 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 TOR3AQ9H497 397 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 FAM206AQ9NX38 181 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 TVP23BQ9NYZ1 205 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 LRP12Q9Y561 859 aa7.32□□□□□ -1.24
ATG4A-205ENST00000394892 CENPVL3A0A0U1RRI6 287 aa7.31□□□□□ -1.24
ATG4A-205ENST00000394892 A6NLC8 198 aa7.31□□□□□ -1.24
ATG4A-205ENST00000394892 POM121CA8CG34 1229 aa7.31□□□□□ -1.24
ATG4A-205ENST00000394892 ZNF850A8MQ14 1090 aa7.31□□□□□ -1.24
ATG4A-205ENST00000394892 SRRM5B3KS81 715 aa7.31□□□□□ -1.24
ATG4A-205ENST00000394892 DVL1O14640 695 aa7.31□□□□□ -1.24
ATG4A-205ENST00000394892 CDIPTO14735 213 aa7.31□□□□□ -1.24
ATG4A-205ENST00000394892 E2F6O75461 281 aa7.31□□□□□ -1.24
ATG4A-205ENST00000394892 RNASE1P07998 156 aaKnown RBP7.31□□□□□ -1.24
ATG4A-205ENST00000394892 H2BFMP0C1H6 154 aa7.31□□□□□ -1.24
ATG4A-205ENST00000394892 IRF2P14316 349 aa7.31□□□□□ -1.24
ATG4A-205ENST00000394892 HSD11B1P28845 292 aa7.31□□□□□ -1.24
ATG4A-205ENST00000394892 TGM4P49221 684 aa7.31□□□□□ -1.24
ATG4A-205ENST00000394892 PSMA6P60900 246 aaKnown RBP7.31□□□□□ -1.24
ATG4A-205ENST00000394892 MFGE8Q08431 387 aaPredicted RBP7.31□□□□□ -1.24
ATG4A-205ENST00000394892 BAMBIQ13145 260 aa7.31□□□□□ -1.24
ATG4A-205ENST00000394892 PRDX4Q13162 271 aa7.31□□□□□ -1.24
ATG4A-205ENST00000394892 PTGES3Q15185 160 aaKnown RBP7.31□□□□□ -1.24
ATG4A-205ENST00000394892 ATP6AP1Q15904 470 aa7.31□□□□□ -1.24
ATG4A-205ENST00000394892 SNAPC1Q16533 368 aa7.31□□□□□ -1.24
ATG4A-205ENST00000394892 MIDNQ504T8 468 aa7.31□□□□□ -1.24
ATG4A-205ENST00000394892 WDR38Q5JTN6 314 aa7.31□□□□□ -1.24
ATG4A-205ENST00000394892 SLC35D3Q5M8T2 416 aa7.31□□□□□ -1.24
ATG4A-205ENST00000394892 KDM4DQ6B0I6 523 aa7.31□□□□□ -1.24
ATG4A-205ENST00000394892 AMIGO2Q86SJ2 522 aa7.31□□□□□ -1.24
ATG4A-205ENST00000394892 GALNT4Q8N4A0 578 aa7.31□□□□□ -1.24
ATG4A-205ENST00000394892 FAM216BQ8N7L0 139 aa7.31□□□□□ -1.24
ATG4A-205ENST00000394892 ZNF454Q8N9F8 522 aa7.31□□□□□ -1.24
ATG4A-205ENST00000394892 LY6G5BQ8NDX9 201 aa7.31□□□□□ -1.24
ATG4A-205ENST00000394892 OR5T2Q8NGG2 359 aa7.31□□□□□ -1.24
ATG4A-205ENST00000394892 OR52H1Q8NGJ2 320 aa7.31□□□□□ -1.24
ATG4A-205ENST00000394892 NRBF2Q96F24 287 aa7.31□□□□□ -1.24
ATG4A-205ENST00000394892 PGAM5Q96HS1 289 aa7.31□□□□□ -1.24
ATG4A-205ENST00000394892 PLEKHA8Q96JA3 519 aa7.31□□□□□ -1.24
ATG4A-205ENST00000394892 TTTY10Q9BZA0 68 aa7.31□□□□□ -1.24
ATG4A-205ENST00000394892 OR10A2Q9H208 303 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms