RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 TNRC6AQ8NDV7 1962 aaKnown RBP13.46□□□□□ -0.25
CPSF7-202ENST00000394888 OR5H14A6NHG9 310 aa13.46□□□□□ -0.26
CPSF7-202ENST00000394888 STK17BO94768 372 aa13.46□□□□□ -0.26
CPSF7-202ENST00000394888 HLA-AP01891 365 aaKnown RBP13.46□□□□□ -0.26
CPSF7-202ENST00000394888 RPS27AP62979 156 aaKnown RBP13.46□□□□□ -0.26
CPSF7-202ENST00000394888 EIF3IQ13347 325 aaKnown RBP13.46□□□□□ -0.26
CPSF7-202ENST00000394888 MEF2DQ14814 521 aa13.46□□□□□ -0.26
CPSF7-202ENST00000394888 EXT1Q16394 746 aa13.46□□□□□ -0.26
CPSF7-202ENST00000394888 GSG1LQ6UXU4 331 aa13.46□□□□□ -0.26
CPSF7-202ENST00000394888 DOK3Q7L591 496 aa13.46□□□□□ -0.26
CPSF7-202ENST00000394888 STPG2Q8N412 459 aa13.46□□□□□ -0.26
CPSF7-202ENST00000394888 OR13G1Q8NGZ3 307 aa13.46□□□□□ -0.26
CPSF7-202ENST00000394888 CCDC120Q96HB5 630 aa13.46□□□□□ -0.26
CPSF7-202ENST00000394888 RNF126Q9BV68 326 aa13.46□□□□□ -0.26
CPSF7-202ENST00000394888 TM2D1Q9BX74 207 aa13.46□□□□□ -0.26
CPSF7-202ENST00000394888 HPNP05981 417 aa13.45□□□□□ -0.26
CPSF7-202ENST00000394888 MSR1P21757 451 aa13.45□□□□□ -0.26
CPSF7-202ENST00000394888 GRB2P62993 217 aaKnown RBP13.45□□□□□ -0.26
CPSF7-202ENST00000394888 PGAP1Q75T13 922 aa13.45□□□□□ -0.26
CPSF7-202ENST00000394888 KCNRGQ8N5I3 272 aa13.45□□□□□ -0.26
CPSF7-202ENST00000394888 ROBO4Q8WZ75 1007 aa13.45□□□□□ -0.26
CPSF7-202ENST00000394888 SDHAF2Q9NX18 166 aa13.45□□□□□ -0.26
CPSF7-202ENST00000394888 GPR132Q9UNW8 380 aa13.45□□□□□ -0.26
CPSF7-202ENST00000394888 UBE2QL1A1L167 161 aa13.45□□□□□ -0.26
CPSF7-202ENST00000394888 H0YIZ8 118 aa13.45□□□□□ -0.26
CPSF7-202ENST00000394888 WDPCPO95876 746 aa13.45□□□□□ -0.26
CPSF7-202ENST00000394888 HOXD4P09016 255 aaPredicted RBP13.45□□□□□ -0.26
CPSF7-202ENST00000394888 FKBP2P26885 142 aaKnown RBP13.45□□□□□ -0.26
CPSF7-202ENST00000394888 ZNF84P51523 738 aa13.45□□□□□ -0.26
CPSF7-202ENST00000394888 IL15RAQ13261 267 aa13.45□□□□□ -0.26
CPSF7-202ENST00000394888 TRA2AQ13595 282 aaKnown RBP eCLIP13.45□□□□□ -0.26
CPSF7-202ENST00000394888 GK2Q14410 553 aaPredicted RBP13.45□□□□□ -0.26
CPSF7-202ENST00000394888 SLC23A3Q6PIS1 610 aa13.45□□□□□ -0.26
CPSF7-202ENST00000394888 OSGIN2Q9Y236 505 aa13.45□□□□□ -0.26
CPSF7-202ENST00000394888 ERCC1P07992 297 aaPredicted RBP13.45□□□□□ -0.26
CPSF7-202ENST00000394888 ZNF345Q14585 488 aa13.45□□□□□ -0.26
CPSF7-202ENST00000394888 ZMYND11Q15326 602 aa13.45□□□□□ -0.26
CPSF7-202ENST00000394888 KISS1Q15726 138 aa13.45□□□□□ -0.26
CPSF7-202ENST00000394888 C11orf87Q6NUJ2 197 aa13.45□□□□□ -0.26
CPSF7-202ENST00000394888 MARCH1Q8TCQ1 289 aa13.45□□□□□ -0.26
CPSF7-202ENST00000394888 TNFAIP8L1Q8WVP5 186 aa13.45□□□□□ -0.26
CPSF7-202ENST00000394888 SGK3Q96BR1 496 aa13.45□□□□□ -0.26
CPSF7-202ENST00000394888 RRNAD1Q96FB5 475 aaKnown RBP13.45□□□□□ -0.26
CPSF7-202ENST00000394888 PRR13Q9NZ81 148 aa13.45□□□□□ -0.26
CPSF7-202ENST00000394888 CAPZA1P52907 286 aa13.44□□□□□ -0.26
CPSF7-202ENST00000394888 FAHD2BQ6P2I3 314 aaPredicted RBP13.44□□□□□ -0.26
CPSF7-202ENST00000394888 OR2AJ1Q8NGZ0 328 aa13.44□□□□□ -0.26
CPSF7-202ENST00000394888 FAHD2AQ96GK7 314 aa13.44□□□□□ -0.26
CPSF7-202ENST00000394888 PRRT1Q99946 306 aa13.44□□□□□ -0.26
CPSF7-202ENST00000394888 CHST5Q9GZS9 411 aa13.44□□□□□ -0.26
CPSF7-202ENST00000394888 ARL6Q9H0F7 186 aa13.44□□□□□ -0.26
CPSF7-202ENST00000394888 MCTS1Q9ULC4 181 aaKnown RBP13.44□□□□□ -0.26
CPSF7-202ENST00000394888 FREM1Q5H8C1 2179 aa13.44□□□□□ -0.26
CPSF7-202ENST00000394888 LOC100509620A0A075B734 347 aa13.44□□□□□ -0.26
CPSF7-202ENST00000394888 TRBV6-7A0A0A0MS04 114 aa13.44□□□□□ -0.26
CPSF7-202ENST00000394888 FIGNL2A6NMB9 653 aa13.44□□□□□ -0.26
CPSF7-202ENST00000394888 TEX46H3BTG2 121 aa13.44□□□□□ -0.26
CPSF7-202ENST00000394888 FAHP16930 419 aa13.44□□□□□ -0.26
CPSF7-202ENST00000394888 SSR4P51571 173 aa13.44□□□□□ -0.26
CPSF7-202ENST00000394888 FOXO1Q12778 655 aa13.44□□□□□ -0.26
CPSF7-202ENST00000394888 ABLIM2Q6H8Q1 611 aa13.44□□□□□ -0.26
CPSF7-202ENST00000394888 LRRC18Q8N456 261 aa13.44□□□□□ -0.26
CPSF7-202ENST00000394888 GPR160Q9UJ42 338 aa13.44□□□□□ -0.26
CPSF7-202ENST00000394888 METTL21EPA6NDL7 271 aa13.44□□□□□ -0.26
CPSF7-202ENST00000394888 I3L521 148 aa13.44□□□□□ -0.26
CPSF7-202ENST00000394888 CFIP05156 583 aa13.44□□□□□ -0.26
CPSF7-202ENST00000394888 GSTP1P09211 210 aaKnown RBP13.44□□□□□ -0.26
CPSF7-202ENST00000394888 PTGFRP43088 359 aa13.44□□□□□ -0.26
CPSF7-202ENST00000394888 TUSC1Q2TAM9 212 aa13.44□□□□□ -0.26
CPSF7-202ENST00000394888 RNASE10Q5GAN6 216 aaKnown RBP13.44□□□□□ -0.26
CPSF7-202ENST00000394888 CLVS2Q5SYC1 327 aa13.44□□□□□ -0.26
CPSF7-202ENST00000394888 OPN5Q6U736 354 aa13.44□□□□□ -0.26
CPSF7-202ENST00000394888 PPP1R1CQ8WVI7 109 aa13.44□□□□□ -0.26
CPSF7-202ENST00000394888 MR1Q95460 341 aa13.44□□□□□ -0.26
CPSF7-202ENST00000394888 SEC22AQ96IW7 307 aa13.44□□□□□ -0.26
CPSF7-202ENST00000394888 TP53I11O14683 189 aa13.43□□□□□ -0.26
CPSF7-202ENST00000394888 DHRS3O75911 302 aa13.43□□□□□ -0.26
CPSF7-202ENST00000394888 RAC1P63000 192 aa13.43□□□□□ -0.26
CPSF7-202ENST00000394888 FAM27BQ5VT28 67 aa13.43□□□□□ -0.26
CPSF7-202ENST00000394888 OVCH2Q7RTZ1 564 aa13.43□□□□□ -0.26
CPSF7-202ENST00000394888 EIF4E3Q8N5X7 224 aaKnown RBP13.43□□□□□ -0.26
CPSF7-202ENST00000394888 ZNF75AQ96N20 296 aa13.43□□□□□ -0.26
CPSF7-202ENST00000394888 TMA7Q9Y2S6 64 aaKnown RBP13.43□□□□□ -0.26
CPSF7-202ENST00000394888 SMG1Q96Q15 3661 aaKnown RBP13.43□□□□□ -0.26
CPSF7-202ENST00000394888 TMEM185AQ8NFB2 350 aa13.43□□□□□ -0.26
CPSF7-202ENST00000394888 OR5D18Q8NGL1 313 aa13.43□□□□□ -0.26
CPSF7-202ENST00000394888 SHARPINQ9H0F6 387 aa13.43□□□□□ -0.26
CPSF7-202ENST00000394888 UPB1Q9UBR1 384 aa13.43□□□□□ -0.26
CPSF7-202ENST00000394888 OR6C6A6NF89 314 aa13.43□□□□□ -0.26
CPSF7-202ENST00000394888 YKT6O15498 198 aa13.43□□□□□ -0.26
CPSF7-202ENST00000394888 DHHO43323 396 aa13.43□□□□□ -0.26
CPSF7-202ENST00000394888 RP2O75695 350 aa13.43□□□□□ -0.26
CPSF7-202ENST00000394888 DUS4LO95620 317 aaKnown RBP13.43□□□□□ -0.26
CPSF7-202ENST00000394888 CD34P28906 385 aa13.43□□□□□ -0.26
CPSF7-202ENST00000394888 CSNK1A1P48729 337 aa13.43□□□□□ -0.26
CPSF7-202ENST00000394888 GFRA1P56159 465 aa13.43□□□□□ -0.26
CPSF7-202ENST00000394888 PRSS12P56730 875 aa13.43□□□□□ -0.26
CPSF7-202ENST00000394888 ECH1Q13011 328 aa13.43□□□□□ -0.26
CPSF7-202ENST00000394888 ANKRD55Q3KP44 614 aa13.43□□□□□ -0.26
CPSF7-202ENST00000394888 RHBDD1Q8TEB9 315 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms