RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 ST8SIA1Q92185 356 aa14.35□□□□□ -0.11
PCDH1-203ENST00000394536 PRELID3BQ9Y3B1 194 aa14.35□□□□□ -0.11
PCDH1-203ENST00000394536 C2CD4DB7Z1M9 353 aa14.34□□□□□ -0.11
PCDH1-203ENST00000394536 C9J4A7 227 aa14.34□□□□□ -0.11
PCDH1-203ENST00000394536 LMO7DNF2Z398 122 aa14.34□□□□□ -0.11
PCDH1-203ENST00000394536 OR13C7P0DN81 318 aa14.34□□□□□ -0.11
PCDH1-203ENST00000394536 MPGP29372 298 aa14.34□□□□□ -0.11
PCDH1-203ENST00000394536 DTWD2Q8NBA8 298 aa14.34□□□□□ -0.11
PCDH1-203ENST00000394536 OR51F2Q8NH61 342 aa14.34□□□□□ -0.11
PCDH1-203ENST00000394536 EDAQ92838 391 aa14.34□□□□□ -0.11
PCDH1-203ENST00000394536 PLXNA2O75051 1894 aa14.34□□□□□ -0.11
PCDH1-203ENST00000394536 ABCD4O14678 606 aa14.34□□□□□ -0.11
PCDH1-203ENST00000394536 TO15178 435 aa14.34□□□□□ -0.11
PCDH1-203ENST00000394536 IFNA2P01563 188 aa14.34□□□□□ -0.11
PCDH1-203ENST00000394536 IGHV3-9P01782 118 aa14.34□□□□□ -0.11
PCDH1-203ENST00000394536 TTRP02766 147 aa14.34□□□□□ -0.11
PCDH1-203ENST00000394536 NME1P15531 152 aaKnown RBP14.34□□□□□ -0.11
PCDH1-203ENST00000394536 OR2B8PP59922 312 aa14.34□□□□□ -0.11
PCDH1-203ENST00000394536 JMJD6Q6NYC1 403 aaPredicted RBP14.34□□□□□ -0.11
PCDH1-203ENST00000394536 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.34□□□□□ -0.11
PCDH1-203ENST00000394536 C6orf201Q7Z4U5 140 aa14.34□□□□□ -0.11
PCDH1-203ENST00000394536 A8MXK9 166 aa14.34□□□□□ -0.11
PCDH1-203ENST00000394536 TPPPO94811 219 aa14.34□□□□□ -0.11
PCDH1-203ENST00000394536 POU2F2P09086 479 aa14.34□□□□□ -0.11
PCDH1-203ENST00000394536 HNF4GQ14541 408 aa14.34□□□□□ -0.11
PCDH1-203ENST00000394536 LRRC75AQ8NAA5 344 aa14.34□□□□□ -0.11
PCDH1-203ENST00000394536 C2orf50Q96LR7 162 aa14.34□□□□□ -0.11
PCDH1-203ENST00000394536 HIST1H2AAQ96QV6 131 aa14.34□□□□□ -0.11
PCDH1-203ENST00000394536 SYT3Q9BQG1 590 aa14.34□□□□□ -0.11
PCDH1-203ENST00000394536 WDR13Q9H1Z4 485 aa14.34□□□□□ -0.11
PCDH1-203ENST00000394536 LILRA5A6NI73 299 aa14.33□□□□□ -0.11
PCDH1-203ENST00000394536 BET1O15155 118 aa14.33□□□□□ -0.11
PCDH1-203ENST00000394536 NFYBP25208 207 aa14.33□□□□□ -0.11
PCDH1-203ENST00000394536 DOK3Q7L591 496 aa14.33□□□□□ -0.11
PCDH1-203ENST00000394536 STX12Q86Y82 276 aa14.33□□□□□ -0.11
PCDH1-203ENST00000394536 MVB12AQ96EY5 273 aa14.33□□□□□ -0.11
PCDH1-203ENST00000394536 ALKBH4Q9NXW9 302 aa14.33□□□□□ -0.11
PCDH1-203ENST00000394536 TRAV14DV4A0A0A6YYC5 116 aa14.33□□□□□ -0.12
PCDH1-203ENST00000394536 SIGLEC6O43699 453 aa14.33□□□□□ -0.12
PCDH1-203ENST00000394536 FASLGP48023 281 aa14.33□□□□□ -0.12
PCDH1-203ENST00000394536 SRYQ05066 204 aa14.33□□□□□ -0.12
PCDH1-203ENST00000394536 KISS1Q15726 138 aa14.33□□□□□ -0.12
PCDH1-203ENST00000394536 ZNF684Q5T5D7 378 aa14.33□□□□□ -0.12
PCDH1-203ENST00000394536 GPR137CQ8N3F9 429 aa14.33□□□□□ -0.12
PCDH1-203ENST00000394536 OR5AP2Q8NGF4 316 aa14.33□□□□□ -0.12
PCDH1-203ENST00000394536 OR14L1PQ8NHC6 308 aa14.33□□□□□ -0.12
PCDH1-203ENST00000394536 FAM212BQ9NTI7 297 aaPredicted RBP14.33□□□□□ -0.12
PCDH1-203ENST00000394536 PTRH2Q9Y3E5 179 aaKnown RBP14.33□□□□□ -0.12
PCDH1-203ENST00000394536 BCAT2O15382 392 aaPredicted RBP14.33□□□□□ -0.12
PCDH1-203ENST00000394536 DXOO77932 396 aaKnown RBP14.33□□□□□ -0.12
PCDH1-203ENST00000394536 EPHA1P21709 976 aa14.33□□□□□ -0.12
PCDH1-203ENST00000394536 S100GP29377 79 aa14.33□□□□□ -0.12
PCDH1-203ENST00000394536 DCDP81605 110 aaKnown RBP14.33□□□□□ -0.12
PCDH1-203ENST00000394536 RSPO4Q2I0M5 234 aaPredicted RBP14.33□□□□□ -0.12
PCDH1-203ENST00000394536 TMPPEQ6ZT21 453 aa14.33□□□□□ -0.12
PCDH1-203ENST00000394536 TMEM217Q8N7C4 229 aa14.33□□□□□ -0.12
PCDH1-203ENST00000394536 SOX7Q9BT81 388 aa14.33□□□□□ -0.12
PCDH1-203ENST00000394536 ZFP57Q9NU63 452 aa14.33□□□□□ -0.12
PCDH1-203ENST00000394536 IGKV1D-43A0A0B4J1Z2 117 aa14.32□□□□□ -0.12
PCDH1-203ENST00000394536 G3V3Q6 166 aa14.32□□□□□ -0.12
PCDH1-203ENST00000394536 PHF1O43189 567 aaPredicted RBP14.32□□□□□ -0.12
PCDH1-203ENST00000394536 EFSO43281 561 aa14.32□□□□□ -0.12
PCDH1-203ENST00000394536 HSPA12AO43301 675 aa14.32□□□□□ -0.12
PCDH1-203ENST00000394536 GSTP1P09211 210 aaKnown RBP14.32□□□□□ -0.12
PCDH1-203ENST00000394536 JMJD7P0C870 316 aa14.32□□□□□ -0.12
PCDH1-203ENST00000394536 ZBTB25P24278 435 aa14.32□□□□□ -0.12
PCDH1-203ENST00000394536 ARL6IP1Q15041 203 aa14.32□□□□□ -0.12
PCDH1-203ENST00000394536 OR8B12Q8NGG6 310 aa14.32□□□□□ -0.12
PCDH1-203ENST00000394536 ASB10Q8WXI3 467 aa14.32□□□□□ -0.12
PCDH1-203ENST00000394536 CNTNAP3Q9BZ76 1288 aa14.32□□□□□ -0.12
PCDH1-203ENST00000394536 OR51B6Q9H340 312 aa14.32□□□□□ -0.12
PCDH1-203ENST00000394536 SPACA1Q9HBV2 294 aa14.32□□□□□ -0.12
PCDH1-203ENST00000394536 LANCL2Q9NS86 450 aa14.32□□□□□ -0.12
PCDH1-203ENST00000394536 PADI1Q9ULC6 663 aa14.32□□□□□ -0.12
PCDH1-203ENST00000394536 RNASEK-C17orf49H0YIS7 233 aa14.32□□□□□ -0.12
PCDH1-203ENST00000394536 SPRY1O43609 319 aaPredicted RBP14.32□□□□□ -0.12
PCDH1-203ENST00000394536 ZNF728P0DKX0 622 aa14.32□□□□□ -0.12
PCDH1-203ENST00000394536 OR5H8P0DN80 308 aa14.32□□□□□ -0.12
PCDH1-203ENST00000394536 ICAM2P13598 275 aa14.32□□□□□ -0.12
PCDH1-203ENST00000394536 RAB2AP61019 212 aa14.32□□□□□ -0.12
PCDH1-203ENST00000394536 ROM1Q03395 351 aa14.32□□□□□ -0.12
PCDH1-203ENST00000394536 ZNF260Q3ZCT1 412 aa14.32□□□□□ -0.12
PCDH1-203ENST00000394536 GJC3Q8NFK1 279 aa14.32□□□□□ -0.12
PCDH1-203ENST00000394536 MESP1Q9BRJ9 268 aa14.32□□□□□ -0.12
PCDH1-203ENST00000394536 TLNRD1Q9H1K6 362 aa14.32□□□□□ -0.12
PCDH1-203ENST00000394536 IGHV1OR21-1A0A087WYE8 117 aa14.32□□□□□ -0.12
PCDH1-203ENST00000394536 PJVKQ0ZLH3 352 aa14.32□□□□□ -0.12
PCDH1-203ENST00000394536 LY6G6FQ5SQ64 297 aa14.32□□□□□ -0.12
PCDH1-203ENST00000394536 ARRDC1Q8N5I2 433 aa14.32□□□□□ -0.12
PCDH1-203ENST00000394536 ASB13Q8WXK3 278 aa14.32□□□□□ -0.12
PCDH1-203ENST00000394536 NAA11Q9BSU3 229 aaPredicted RBP14.32□□□□□ -0.12
PCDH1-203ENST00000394536 LUZP4Q9P127 313 aa14.32□□□□□ -0.12
PCDH1-203ENST00000394536 ZNF175Q9Y473 711 aa14.32□□□□□ -0.12
PCDH1-203ENST00000394536 PTPRZ1P23471 2315 aaPredicted RBP14.32□□□□□ -0.12
PCDH1-203ENST00000394536 CDC14BO60729 498 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 RPS10P46783 165 aaKnown RBP14.31□□□□□ -0.12
PCDH1-203ENST00000394536 KCNJ3P48549 501 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 MMP16P51512 607 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 DEGS2Q6QHC5 323 aa14.31□□□□□ -0.12
PCDH1-203ENST00000394536 PPP1R3BQ86XI6 285 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms